RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 TAF1DQ9H5J8 278 aaPredicted RBP22.1■■□□□ 1.13
SREBF1-211ENST00000476994 IRS4O14654 1257 aaPredicted RBP22.09■■□□□ 1.13
SREBF1-211ENST00000476994 EIF6P56537 245 aaKnown RBP22.09■■□□□ 1.13
SREBF1-211ENST00000476994 RABL6Q3YEC7 729 aaPredicted RBP22.09■■□□□ 1.13
SREBF1-211ENST00000476994 EAPPQ56P03 285 aaPredicted RBP22.09■■□□□ 1.13
SREBF1-211ENST00000476994 CREBZFQ9NS37 354 aa22.09■■□□□ 1.13
SREBF1-211ENST00000476994 CLEC11AQ9Y240 323 aa22.09■■□□□ 1.13
SREBF1-211ENST00000476994 PCDHB15Q9Y5E8 787 aa22.09■■□□□ 1.13
SREBF1-211ENST00000476994 SPEF2Q9C093 1822 aa22.08■■□□□ 1.13
SREBF1-211ENST00000476994 COL4A1P02462 1669 aa22.08■■□□□ 1.13
SREBF1-211ENST00000476994 PPEF1O14829 653 aaPredicted RBP22.08■■□□□ 1.13
SREBF1-211ENST00000476994 PNMA8AQ86V59 439 aaPredicted RBP22.08■■□□□ 1.13
SREBF1-211ENST00000476994 GPC2Q8N158 579 aa22.08■■□□□ 1.13
SREBF1-211ENST00000476994 BICC1Q9H694 974 aaKnown RBP22.08■■□□□ 1.13
SREBF1-211ENST00000476994 ZNF541Q9H0D2 1346 aa22.07■■□□□ 1.12
SREBF1-211ENST00000476994 FZD9O00144 591 aa22.07■■□□□ 1.12
SREBF1-211ENST00000476994 MTX1Q13505 466 aa22.07■■□□□ 1.12
SREBF1-211ENST00000476994 ERICH6BQ5W0A0 696 aa22.07■■□□□ 1.12
SREBF1-211ENST00000476994 C3orf67Q6ZVT6 689 aa22.07■■□□□ 1.12
SREBF1-211ENST00000476994 PDE8AO60658 829 aa22.06■■□□□ 1.12
SREBF1-211ENST00000476994 POTEIP0CG38 1075 aa22.06■■□□□ 1.12
SREBF1-211ENST00000476994 POTEJP0CG39 1038 aa22.06■■□□□ 1.12
SREBF1-211ENST00000476994 HCLS1P14317 486 aaPredicted RBP22.06■■□□□ 1.12
SREBF1-211ENST00000476994 EPHX2P34913 555 aa22.06■■□□□ 1.12
SREBF1-211ENST00000476994 CEP85Q6P2H3 762 aa22.06■■□□□ 1.12
SREBF1-211ENST00000476994 SIRT2Q8IXJ6 389 aa22.06■■□□□ 1.12
SREBF1-211ENST00000476994 CSF1RP07333 972 aa22.05■■□□□ 1.12
SREBF1-211ENST00000476994 LMOD1P29536 600 aaPredicted RBP22.05■■□□□ 1.12
SREBF1-211ENST00000476994 LARGE2Q8N3Y3 721 aa22.05■■□□□ 1.12
SREBF1-211ENST00000476994 A0A1B0GUL6 1792 aa22.04■■□□□ 1.12
SREBF1-211ENST00000476994 CTSWP56202 376 aa22.04■■□□□ 1.12
SREBF1-211ENST00000476994 HDAC5Q9UQL6 1122 aa22.04■■□□□ 1.12
SREBF1-211ENST00000476994 GJA3Q9Y6H8 435 aa22.04■■□□□ 1.12
SREBF1-211ENST00000476994 RTL9Q8NET4 1388 aa22.03■■□□□ 1.12
SREBF1-211ENST00000476994 TTLL11Q8NHH1 800 aa22.03■■□□□ 1.12
SREBF1-211ENST00000476994 PNMA6EA0A0J9YXQ4 647 aa22.02■■□□□ 1.12
SREBF1-211ENST00000476994 HSPA1AP0DMV8 641 aaKnown RBP22.02■■□□□ 1.12
SREBF1-211ENST00000476994 HSPA1BP0DMV9 641 aaKnown RBP22.02■■□□□ 1.12
SREBF1-211ENST00000476994 ATP8B2P98198 1209 aa22.02■■□□□ 1.12
SREBF1-211ENST00000476994 SF3B3Q15393 1217 aaKnown RBP22.02■■□□□ 1.12
SREBF1-211ENST00000476994 LMBR1LQ6UX01 489 aa22.02■■□□□ 1.12
SREBF1-211ENST00000476994 NIM1KQ8IY84 436 aa22.02■■□□□ 1.12
SREBF1-211ENST00000476994 SUPT20HQ8NEM7 779 aa22.02■■□□□ 1.12
SREBF1-211ENST00000476994 MKRN1Q9UHC7 482 aaKnown RBP22.02■■□□□ 1.12
SREBF1-211ENST00000476994 SNED1Q8TER0 1413 aa22.01■■□□□ 1.11
SREBF1-211ENST00000476994 POLA2Q14181 598 aa22.01■■□□□ 1.11
SREBF1-211ENST00000476994 RPAP2Q8IXW5 612 aaPredicted RBP22.01■■□□□ 1.11
SREBF1-211ENST00000476994 VPS33BQ9H267 617 aa22.01■■□□□ 1.11
SREBF1-211ENST00000476994 ATP6V0A2Q9Y487 856 aa22.01■■□□□ 1.11
SREBF1-211ENST00000476994 PASKQ96RG2 1323 aa22.01■■□□□ 1.11
SREBF1-211ENST00000476994 TMEM88BA6NKF7 163 aa22■■□□□ 1.11
SREBF1-211ENST00000476994 PPIP5K2O43314 1243 aa22■■□□□ 1.11
SREBF1-211ENST00000476994 HSP90B1P14625 803 aaKnown RBP22■■□□□ 1.11
SREBF1-211ENST00000476994 RFX5P48382 616 aaPredicted RBP22■■□□□ 1.11
SREBF1-211ENST00000476994 DDX46Q7L014 1031 aaKnown RBP22■■□□□ 1.11
SREBF1-211ENST00000476994 SSH3Q8TE77 659 aa22■■□□□ 1.11
SREBF1-211ENST00000476994 ADAMTSL1Q8N6G6 1762 aa21.99■■□□□ 1.11
SREBF1-211ENST00000476994 BBOX1O75936 387 aa21.99■■□□□ 1.11
SREBF1-211ENST00000476994 FAM161AQ3B820 660 aa21.99■■□□□ 1.11
SREBF1-211ENST00000476994 COL13A1Q5TAT6 717 aaPredicted RBP21.99■■□□□ 1.11
SREBF1-211ENST00000476994 TNS4Q8IZW8 715 aa21.98■■□□□ 1.11
SREBF1-211ENST00000476994 GREM2Q9H772 168 aa21.98■■□□□ 1.11
SREBF1-211ENST00000476994 LRRC37AA6NMS7 1700 aa21.97■■□□□ 1.11
SREBF1-211ENST00000476994 HDAC1Q13547 482 aaPredicted RBP21.97■■□□□ 1.11
SREBF1-211ENST00000476994 CNTROBQ8N137 903 aa21.97■■□□□ 1.11
SREBF1-211ENST00000476994 CNTNAP1P78357 1384 aa21.97■■□□□ 1.11
SREBF1-211ENST00000476994 SRGAP3O43295 1099 aa21.96■■□□□ 1.11
SREBF1-211ENST00000476994 ITGBL1O95965 494 aaPredicted RBP21.96■■□□□ 1.11
SREBF1-211ENST00000476994 DPP8Q6V1X1 898 aaPredicted RBP21.96■■□□□ 1.11
SREBF1-211ENST00000476994 SP8Q8IXZ3 490 aa21.96■■□□□ 1.11
SREBF1-211ENST00000476994 IGHDP01880 384 aa21.95■■□□□ 1.1
SREBF1-211ENST00000476994 AOC3Q16853 763 aa21.95■■□□□ 1.1
SREBF1-211ENST00000476994 CCDC152Q4G0S7 254 aa21.95■■□□□ 1.1
SREBF1-211ENST00000476994 MAP1SQ66K74 1059 aaPredicted RBP21.95■■□□□ 1.1
SREBF1-211ENST00000476994 TMC4Q7Z404 712 aa21.95■■□□□ 1.1
SREBF1-211ENST00000476994 MPNDQ8N594 471 aa21.95■■□□□ 1.1
SREBF1-211ENST00000476994 CCDC85AQ96PX6 553 aaPredicted RBP21.95■■□□□ 1.1
SREBF1-211ENST00000476994 GTF3C3Q9Y5Q9 886 aa21.95■■□□□ 1.1
SREBF1-211ENST00000476994 TRPM7Q96QT4 1865 aa21.94■■□□□ 1.1
SREBF1-211ENST00000476994 ITGA6P23229 1130 aa21.94■■□□□ 1.1
SREBF1-211ENST00000476994 PTPN12Q05209 780 aaKnown RBP21.94■■□□□ 1.1
SREBF1-211ENST00000476994 AIDAQ96BJ3 306 aa21.94■■□□□ 1.1
SREBF1-211ENST00000476994 SEC31BQ9NQW1 1179 aa21.94■■□□□ 1.1
SREBF1-211ENST00000476994 PPP4R2Q9NY27 417 aa21.94■■□□□ 1.1
SREBF1-211ENST00000476994 COL4A5P29400 1685 aa21.94■■□□□ 1.1
SREBF1-211ENST00000476994 GRAPQ13588 217 aa21.93■■□□□ 1.1
SREBF1-211ENST00000476994 USP50Q70EL3 339 aaPredicted RBP21.93■■□□□ 1.1
SREBF1-211ENST00000476994 GRAPLQ8TC17 118 aaPredicted RBP21.93■■□□□ 1.1
SREBF1-211ENST00000476994 COPRSQ9NQ92 184 aa21.93■■□□□ 1.1
SREBF1-211ENST00000476994 ZNRF3Q9ULT6 936 aa21.93■■□□□ 1.1
SREBF1-211ENST00000476994 KLHDC4Q8TBB5 520 aa21.92■■□□□ 1.1
SREBF1-211ENST00000476994 RTFDC1Q9BY42 306 aaPredicted RBP21.92■■□□□ 1.1
SREBF1-211ENST00000476994 PA2G4Q9UQ80 394 aaKnown RBP21.92■■□□□ 1.1
SREBF1-211ENST00000476994 CHMP3Q9Y3E7 222 aa21.92■■□□□ 1.1
SREBF1-211ENST00000476994 LTBP1Q14766 1721 aa21.92■■□□□ 1.1
SREBF1-211ENST00000476994 HMMRO75330 724 aa21.91■■□□□ 1.1
SREBF1-211ENST00000476994 SCNN1DP51172 638 aa21.91■■□□□ 1.1
SREBF1-211ENST00000476994 IFIT5Q13325 482 aaKnown RBP21.91■■□□□ 1.1
SREBF1-211ENST00000476994 ABT1Q9ULW3 272 aaKnown RBP21.91■■□□□ 1.1
SREBF1-211ENST00000476994 NOP58Q9Y2X3 529 aaKnown RBP21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms