RNA–Protein interactions for RNA: ENST00000475800.5

SNX13-207, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 507 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-207ENST00000475800 EAPPQ56P03 285 aaPredicted RBP18.97■□□□□ 0.63
SNX13-207ENST00000475800 SLC51AQ86UW1 340 aa18.97■□□□□ 0.63
SNX13-207ENST00000475800 CHMP3Q9Y3E7 222 aa18.97■□□□□ 0.63
SNX13-207ENST00000475800 SNED1Q8TER0 1413 aa18.97■□□□□ 0.63
SNX13-207ENST00000475800 ZNF541Q9H0D2 1346 aa18.97■□□□□ 0.63
SNX13-207ENST00000475800 CCDC57Q2TAC2 916 aa18.96■□□□□ 0.63
SNX13-207ENST00000475800 EPHA10Q5JZY3 1008 aa18.96■□□□□ 0.63
SNX13-207ENST00000475800 COL13A1Q5TAT6 717 aaPredicted RBP18.96■□□□□ 0.63
SNX13-207ENST00000475800 TMEM57Q8N5G2 664 aa18.96■□□□□ 0.63
SNX13-207ENST00000475800 JMYQ8N9B5 988 aa18.96■□□□□ 0.63
SNX13-207ENST00000475800 SUPT20HQ8NEM7 779 aa18.96■□□□□ 0.63
SNX13-207ENST00000475800 BSDC1Q9NW68 430 aaPredicted RBP18.96■□□□□ 0.63
SNX13-207ENST00000475800 TNNQ9UQP3 1299 aa18.96■□□□□ 0.63
SNX13-207ENST00000475800 CHADLQ6NUI6 762 aa18.95■□□□□ 0.62
SNX13-207ENST00000475800 MPNDQ8N594 471 aa18.95■□□□□ 0.62
SNX13-207ENST00000475800 KAZALD1Q96I82 304 aa18.95■□□□□ 0.62
SNX13-207ENST00000475800 VPS33BQ9H267 617 aa18.95■□□□□ 0.62
SNX13-207ENST00000475800 BICC1Q9H694 974 aaKnown RBP18.95■□□□□ 0.62
SNX13-207ENST00000475800 CAPN15O75808 1086 aa18.94■□□□□ 0.62
SNX13-207ENST00000475800 DPP8Q6V1X1 898 aaPredicted RBP18.94■□□□□ 0.62
SNX13-207ENST00000475800 ITPRIPQ8IWB1 547 aa18.94■□□□□ 0.62
SNX13-207ENST00000475800 MPHOSPH8Q99549 860 aa18.94■□□□□ 0.62
SNX13-207ENST00000475800 MEIS3Q99687 375 aa18.94■□□□□ 0.62
SNX13-207ENST00000475800 MKRN1Q9UHC7 482 aaKnown RBP18.94■□□□□ 0.62
SNX13-207ENST00000475800 CLEC11AQ9Y240 323 aa18.94■□□□□ 0.62
SNX13-207ENST00000475800 COL4A1P02462 1669 aa18.94■□□□□ 0.62
SNX13-207ENST00000475800 TAF7LQ5H9L4 462 aa18.93■□□□□ 0.62
SNX13-207ENST00000475800 ANKRD44Q8N8A2 993 aa18.93■□□□□ 0.62
SNX13-207ENST00000475800 RTFDC1Q9BY42 306 aaPredicted RBP18.93■□□□□ 0.62
SNX13-207ENST00000475800 IQCA1LA6NCM1 817 aa18.92■□□□□ 0.62
SNX13-207ENST00000475800 RLBP1P12271 317 aa18.92■□□□□ 0.62
SNX13-207ENST00000475800 IARSP41252 1262 aaKnown RBP18.92■□□□□ 0.62
SNX13-207ENST00000475800 PDE3AQ14432 1141 aa18.92■□□□□ 0.62
SNX13-207ENST00000475800 CHMP4BQ9H444 224 aaKnown RBP18.92■□□□□ 0.62
SNX13-207ENST00000475800 TAF1DQ9H5J8 278 aaPredicted RBP18.92■□□□□ 0.62
SNX13-207ENST00000475800 PODXL2Q9NZ53 605 aa18.92■□□□□ 0.62
SNX13-207ENST00000475800 LTBP1Q14766 1721 aa18.91■□□□□ 0.62
SNX13-207ENST00000475800 GNAI2P04899 355 aa18.91■□□□□ 0.62
SNX13-207ENST00000475800 HSPA1AP0DMV8 641 aaKnown RBP18.91■□□□□ 0.62
SNX13-207ENST00000475800 HSPA1BP0DMV9 641 aaKnown RBP18.91■□□□□ 0.62
SNX13-207ENST00000475800 NSFL1CQ9UNZ2 370 aaKnown RBP18.91■□□□□ 0.62
SNX13-207ENST00000475800 LRRFIP2Q9Y608 721 aaKnown RBP18.91■□□□□ 0.62
SNX13-207ENST00000475800 GJA3Q9Y6H8 435 aa18.91■□□□□ 0.62
SNX13-207ENST00000475800 XDHP47989 1333 aa18.91■□□□□ 0.62
SNX13-207ENST00000475800 PANK1Q8TE04 598 aa18.9■□□□□ 0.62
SNX13-207ENST00000475800 ANKRD2Q9GZV1 360 aa18.9■□□□□ 0.62
SNX13-207ENST00000475800 ANKIB1Q9P2G1 1089 aa18.9■□□□□ 0.62
SNX13-207ENST00000475800 PLIN1O60240 522 aa18.89■□□□□ 0.61
SNX13-207ENST00000475800 GPSM2P81274 684 aa18.89■□□□□ 0.61
SNX13-207ENST00000475800 MVPQ14764 893 aaKnown RBP18.89■□□□□ 0.61
SNX13-207ENST00000475800 EYA3Q99504 573 aa18.89■□□□□ 0.61
SNX13-207ENST00000475800 HACL1Q9UJ83 578 aa18.89■□□□□ 0.61
SNX13-207ENST00000475800 DDX19BQ9UMR2 479 aa18.89■□□□□ 0.61
SNX13-207ENST00000475800 MINPP1Q9UNW1 487 aa18.89■□□□□ 0.61
SNX13-207ENST00000475800 EPHX2P34913 555 aa18.88■□□□□ 0.61
SNX13-207ENST00000475800 LDHAL6AQ6ZMR3 332 aa18.88■□□□□ 0.61
SNX13-207ENST00000475800 LDHDQ86WU2 507 aa18.88■□□□□ 0.61
SNX13-207ENST00000475800 JDP2Q8WYK2 163 aa18.88■□□□□ 0.61
SNX13-207ENST00000475800 GGA1Q9UJY5 639 aa18.88■□□□□ 0.61
SNX13-207ENST00000475800 DUOX1Q9NRD9 1551 aa18.88■□□□□ 0.61
SNX13-207ENST00000475800 A0A1B0GUL6 1792 aa18.87■□□□□ 0.61
SNX13-207ENST00000475800 ZBTB7BO15156 539 aaPredicted RBP18.87■□□□□ 0.61
SNX13-207ENST00000475800 PPIP5K2O43314 1243 aa18.87■□□□□ 0.61
SNX13-207ENST00000475800 ATP2B4P23634 1241 aa18.87■□□□□ 0.61
SNX13-207ENST00000475800 MTX1Q13505 466 aa18.87■□□□□ 0.61
SNX13-207ENST00000475800 MAP1SQ66K74 1059 aaPredicted RBP18.87■□□□□ 0.61
SNX13-207ENST00000475800 LARGE2Q8N3Y3 721 aa18.87■□□□□ 0.61
SNX13-207ENST00000475800 L3MBTL3Q96JM7 780 aaPredicted RBP18.87■□□□□ 0.61
SNX13-207ENST00000475800 CNNM1Q9NRU3 951 aa18.87■□□□□ 0.61
SNX13-207ENST00000475800 C6orf229H3BNL8 230 aa18.86■□□□□ 0.61
SNX13-207ENST00000475800 UFL1O94874 794 aa18.86■□□□□ 0.61
SNX13-207ENST00000475800 KIAA2012Q0VF49 1180 aa18.86■□□□□ 0.61
SNX13-207ENST00000475800 TNS4Q8IZW8 715 aa18.86■□□□□ 0.61
SNX13-207ENST00000475800 TBC1D16Q8TBP0 767 aa18.86■□□□□ 0.61
SNX13-207ENST00000475800 CREBZFQ9NS37 354 aa18.86■□□□□ 0.61
SNX13-207ENST00000475800 FBXO3Q9UK99 471 aa18.86■□□□□ 0.61
SNX13-207ENST00000475800 LEMD3Q9Y2U8 911 aa18.86■□□□□ 0.61
SNX13-207ENST00000475800 SCN4AP35499 1836 aa18.86■□□□□ 0.61
SNX13-207ENST00000475800 FZD9O00144 591 aa18.85■□□□□ 0.61
SNX13-207ENST00000475800 RRP1P56182 461 aaKnown RBP18.85■□□□□ 0.61
SNX13-207ENST00000475800 EIF6P56537 245 aaKnown RBP18.85■□□□□ 0.61
SNX13-207ENST00000475800 CHRNDQ07001 517 aa18.85■□□□□ 0.61
SNX13-207ENST00000475800 WASHC4Q2M389 1173 aa18.85■□□□□ 0.61
SNX13-207ENST00000475800 NIM1KQ8IY84 436 aa18.85■□□□□ 0.61
SNX13-207ENST00000475800 ZNF594Q96JF6 807 aaPredicted RBP18.85■□□□□ 0.61
SNX13-207ENST00000475800 POLLQ9UGP5 575 aa18.85■□□□□ 0.61
SNX13-207ENST00000475800 COG6Q9Y2V7 657 aa18.85■□□□□ 0.61
SNX13-207ENST00000475800 COL4A5P29400 1685 aa18.85■□□□□ 0.61
SNX13-207ENST00000475800 MROH5Q6ZUA9 1318 aa18.84■□□□□ 0.61
SNX13-207ENST00000475800 AOC3Q16853 763 aa18.84■□□□□ 0.61
SNX13-207ENST00000475800 RFX5P48382 616 aaPredicted RBP18.83■□□□□ 0.6
SNX13-207ENST00000475800 GPC2Q8N158 579 aa18.83■□□□□ 0.6
SNX13-207ENST00000475800 ZC3H12CQ9C0D7 883 aaKnown RBP18.83■□□□□ 0.6
SNX13-207ENST00000475800 SRGAP3O43295 1099 aa18.82■□□□□ 0.6
SNX13-207ENST00000475800 KCNJ4P48050 445 aa18.82■□□□□ 0.6
SNX13-207ENST00000475800 PTPN12Q05209 780 aaKnown RBP18.82■□□□□ 0.6
SNX13-207ENST00000475800 RIPOR2Q9Y4F9 1068 aa18.82■□□□□ 0.6
SNX13-207ENST00000475800 MED23Q9ULK4 1368 aa18.81■□□□□ 0.6
SNX13-207ENST00000475800 ZNF804BA4D1E1 1349 aa18.81■□□□□ 0.6
SNX13-207ENST00000475800 PASKQ96RG2 1323 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms