RNA–Protein interactions for RNA: ENST00000473879.1

BRAT1-205, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-205ENST00000473879 JDP2Q8WYK2 163 aa16.59■□□□□ 0.25
BRAT1-205ENST00000473879 DUOX1Q9NRD9 1551 aa16.59■□□□□ 0.25
BRAT1-205ENST00000473879 RPS8P62241 208 aaKnown RBP16.58■□□□□ 0.24
BRAT1-205ENST00000473879 CTSWP56202 376 aa16.57■□□□□ 0.24
BRAT1-205ENST00000473879 B4GALNT3Q6L9W6 998 aa16.57■□□□□ 0.24
BRAT1-205ENST00000473879 LARGE2Q8N3Y3 721 aa16.57■□□□□ 0.24
BRAT1-205ENST00000473879 KAZALD1Q96I82 304 aa16.57■□□□□ 0.24
BRAT1-205ENST00000473879 L3MBTL3Q96JM7 780 aaPredicted RBP16.57■□□□□ 0.24
BRAT1-205ENST00000473879 MEIS3Q99687 375 aa16.57■□□□□ 0.24
BRAT1-205ENST00000473879 HDAC5Q9UQL6 1122 aa16.57■□□□□ 0.24
BRAT1-205ENST00000473879 ZNF541Q9H0D2 1346 aa16.56■□□□□ 0.24
BRAT1-205ENST00000473879 GRM8O00222 908 aa16.56■□□□□ 0.24
BRAT1-205ENST00000473879 PPIP5K2O43314 1243 aa16.56■□□□□ 0.24
BRAT1-205ENST00000473879 CSF1RP07333 972 aa16.56■□□□□ 0.24
BRAT1-205ENST00000473879 UBE3BQ7Z3V4 1068 aa16.56■□□□□ 0.24
BRAT1-205ENST00000473879 TTLL11Q8NHH1 800 aa16.56■□□□□ 0.24
BRAT1-205ENST00000473879 SEC31BQ9NQW1 1179 aa16.56■□□□□ 0.24
BRAT1-205ENST00000473879 UBTFL1P0CB47 393 aaPredicted RBP16.55■□□□□ 0.24
BRAT1-205ENST00000473879 EIF6P56537 245 aaKnown RBP16.55■□□□□ 0.24
BRAT1-205ENST00000473879 FSTL1Q12841 308 aa16.55■□□□□ 0.24
BRAT1-205ENST00000473879 NIM1KQ8IY84 436 aa16.55■□□□□ 0.24
BRAT1-205ENST00000473879 C9orf78Q9NZ63 289 aaPredicted RBP16.55■□□□□ 0.24
BRAT1-205ENST00000473879 A0A1B0GUL6 1792 aa16.55■□□□□ 0.24
BRAT1-205ENST00000473879 COL4A5P29400 1685 aa16.55■□□□□ 0.24
BRAT1-205ENST00000473879 IQCA1LA6NCM1 817 aa16.54■□□□□ 0.24
BRAT1-205ENST00000473879 GNAI2P04899 355 aa16.54■□□□□ 0.24
BRAT1-205ENST00000473879 HSPA6P17066 643 aa16.54■□□□□ 0.24
BRAT1-205ENST00000473879 FOXO4P98177 505 aa16.54■□□□□ 0.24
BRAT1-205ENST00000473879 KIAA2012Q0VF49 1180 aa16.54■□□□□ 0.24
BRAT1-205ENST00000473879 AOC3Q16853 763 aa16.54■□□□□ 0.24
BRAT1-205ENST00000473879 GPC2Q8N158 579 aa16.54■□□□□ 0.24
BRAT1-205ENST00000473879 CCDC85AQ96PX6 553 aaPredicted RBP16.54■□□□□ 0.24
BRAT1-205ENST00000473879 USP44Q9H0E7 712 aa16.54■□□□□ 0.24
BRAT1-205ENST00000473879 SCN4AP35499 1836 aa16.54■□□□□ 0.24
BRAT1-205ENST00000473879 NBPF7P0C2Y1 421 aaPredicted RBP16.53■□□□□ 0.24
BRAT1-205ENST00000473879 RABL6Q3YEC7 729 aaPredicted RBP16.53■□□□□ 0.24
BRAT1-205ENST00000473879 CENPQQ7L2Z9 268 aaPredicted RBP16.53■□□□□ 0.24
BRAT1-205ENST00000473879 ANKRD18AQ8IVF6 992 aa16.53■□□□□ 0.24
BRAT1-205ENST00000473879 SMC1BQ8NDV3 1235 aa16.53■□□□□ 0.24
BRAT1-205ENST00000473879 CDC5LQ99459 802 aaKnown RBP16.53■□□□□ 0.24
BRAT1-205ENST00000473879 RWDD1Q9H446 243 aaPredicted RBP16.53■□□□□ 0.24
BRAT1-205ENST00000473879 PODXL2Q9NZ53 605 aa16.53■□□□□ 0.24
BRAT1-205ENST00000473879 NSFL1CQ9UNZ2 370 aaKnown RBP16.53■□□□□ 0.24
BRAT1-205ENST00000473879 PCDHB15Q9Y5E8 787 aa16.53■□□□□ 0.24
BRAT1-205ENST00000473879 SPEF2Q9C093 1822 aa16.52■□□□□ 0.24
BRAT1-205ENST00000473879 GPSM2P81274 684 aa16.52■□□□□ 0.24
BRAT1-205ENST00000473879 EPHA10Q5JZY3 1008 aa16.52■□□□□ 0.24
BRAT1-205ENST00000473879 GREM2Q9H772 168 aa16.52■□□□□ 0.24
BRAT1-205ENST00000473879 C1orf115Q9H7X2 142 aa16.52■□□□□ 0.24
BRAT1-205ENST00000473879 ZNRF3Q9ULT6 936 aa16.52■□□□□ 0.24
BRAT1-205ENST00000473879 HDAC1Q13547 482 aaPredicted RBP16.51■□□□□ 0.23
BRAT1-205ENST00000473879 RPAP2Q8IXW5 612 aaPredicted RBP16.51■□□□□ 0.23
BRAT1-205ENST00000473879 POLLQ9UGP5 575 aa16.51■□□□□ 0.23
BRAT1-205ENST00000473879 C6orf229H3BNL8 230 aa16.5■□□□□ 0.23
BRAT1-205ENST00000473879 WASHC4Q2M389 1173 aa16.5■□□□□ 0.23
BRAT1-205ENST00000473879 ANKRD44Q8N8A2 993 aa16.5■□□□□ 0.23
BRAT1-205ENST00000473879 TBC1D16Q8TBP0 767 aa16.5■□□□□ 0.23
BRAT1-205ENST00000473879 EYA3Q99504 573 aa16.5■□□□□ 0.23
BRAT1-205ENST00000473879 TAF1DQ9H5J8 278 aaPredicted RBP16.5■□□□□ 0.23
BRAT1-205ENST00000473879 BSDC1Q9NW68 430 aaPredicted RBP16.5■□□□□ 0.23
BRAT1-205ENST00000473879 HACL1Q9UJ83 578 aa16.5■□□□□ 0.23
BRAT1-205ENST00000473879 HMMRO75330 724 aa16.49■□□□□ 0.23
BRAT1-205ENST00000473879 CEP85Q6P2H3 762 aa16.49■□□□□ 0.23
BRAT1-205ENST00000473879 SUCLG2Q96I99 432 aa16.49■□□□□ 0.23
BRAT1-205ENST00000473879 LRRFIP2Q9Y608 721 aaKnown RBP16.49■□□□□ 0.23
BRAT1-205ENST00000473879 GJA3Q9Y6H8 435 aa16.49■□□□□ 0.23
BRAT1-205ENST00000473879 ITGA6P23229 1130 aa16.48■□□□□ 0.23
BRAT1-205ENST00000473879 CXCL9Q07325 125 aa16.48■□□□□ 0.23
BRAT1-205ENST00000473879 ANKIB1Q9P2G1 1089 aa16.48■□□□□ 0.23
BRAT1-205ENST00000473879 GGA1Q9UJY5 639 aa16.48■□□□□ 0.23
BRAT1-205ENST00000473879 XDHP47989 1333 aa16.47■□□□□ 0.23
BRAT1-205ENST00000473879 EPHX2P34913 555 aa16.47■□□□□ 0.23
BRAT1-205ENST00000473879 IGHMBP2P38935 993 aaKnown RBP16.47■□□□□ 0.23
BRAT1-205ENST00000473879 APLP1P51693 650 aa16.47■□□□□ 0.23
BRAT1-205ENST00000473879 FAM161AQ3B820 660 aa16.47■□□□□ 0.23
BRAT1-205ENST00000473879 ZC3H12CQ9C0D7 883 aaKnown RBP16.47■□□□□ 0.23
BRAT1-205ENST00000473879 MINPP1Q9UNW1 487 aa16.47■□□□□ 0.23
BRAT1-205ENST00000473879 ADAMTSL1Q8N6G6 1762 aa16.46■□□□□ 0.23
BRAT1-205ENST00000473879 YDJCA8MPS7 323 aa16.46■□□□□ 0.23
BRAT1-205ENST00000473879 RIMBP2O15034 1052 aa16.46■□□□□ 0.23
BRAT1-205ENST00000473879 UFL1O94874 794 aa16.46■□□□□ 0.23
BRAT1-205ENST00000473879 ATP2B4P23634 1241 aa16.46■□□□□ 0.23
BRAT1-205ENST00000473879 LMOD1P29536 600 aaPredicted RBP16.46■□□□□ 0.23
BRAT1-205ENST00000473879 SCNN1DP51172 638 aa16.46■□□□□ 0.23
BRAT1-205ENST00000473879 TNIP1Q15025 636 aa16.46■□□□□ 0.23
BRAT1-205ENST00000473879 CIAPIN1Q6FI81 312 aa16.46■□□□□ 0.23
BRAT1-205ENST00000473879 CHADLQ6NUI6 762 aa16.46■□□□□ 0.23
BRAT1-205ENST00000473879 PNMA8AQ86V59 439 aaPredicted RBP16.46■□□□□ 0.23
BRAT1-205ENST00000473879 LDHDQ86WU2 507 aa16.46■□□□□ 0.23
BRAT1-205ENST00000473879 ANKRD18BA2A2Z9 1011 aa16.45■□□□□ 0.22
BRAT1-205ENST00000473879 IGHDP01880 384 aa16.45■□□□□ 0.22
BRAT1-205ENST00000473879 POTEIP0CG38 1075 aa16.45■□□□□ 0.22
BRAT1-205ENST00000473879 POTEJP0CG39 1038 aa16.45■□□□□ 0.22
BRAT1-205ENST00000473879 BICC1Q9H694 974 aaKnown RBP16.45■□□□□ 0.22
BRAT1-205ENST00000473879 ZNF646O15015 1829 aaPredicted RBP16.45■□□□□ 0.22
BRAT1-205ENST00000473879 RAD17O75943 681 aa16.44■□□□□ 0.22
BRAT1-205ENST00000473879 ATP8B2P98198 1209 aa16.44■□□□□ 0.22
BRAT1-205ENST00000473879 IFIT5Q13325 482 aaKnown RBP16.44■□□□□ 0.22
BRAT1-205ENST00000473879 MTX1Q13505 466 aa16.44■□□□□ 0.22
BRAT1-205ENST00000473879 LMBR1LQ6UX01 489 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms