RNA–Protein interactions for RNA: ENST00000472218.1

RPS18-231, Transcript of ribosomal protein S18, human

TSL 2

Gene RPS18, Length 1,109 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RPS18-231	ENST00000472218	TMC4	Q7Z404	712 aa		13.18	□□□□□ -0.3
RPS18-231	ENST00000472218	VGLL2	Q8N8G2	317 aa		13.18	□□□□□ -0.3
RPS18-231	ENST00000472218	EVI5L	Q96CN4	794 aa		13.18	□□□□□ -0.3
RPS18-231	ENST00000472218	ZNF594	Q96JF6	807 aa	Predicted RBP	13.18	□□□□□ -0.3
RPS18-231	ENST00000472218	ZNF512B	Q96KM6	892 aa	Predicted RBP	13.18	□□□□□ -0.3
RPS18-231	ENST00000472218	ZNF609	O15014	1411 aa		13.18	□□□□□ -0.3
RPS18-231	ENST00000472218	HIP1	O00291	1037 aa		13.17	□□□□□ -0.3
RPS18-231	ENST00000472218	HOXA10	P31260	410 aa	Predicted RBP	13.17	□□□□□ -0.3
RPS18-231	ENST00000472218	RPS8	P62241	208 aa	Known RBP	13.17	□□□□□ -0.3
RPS18-231	ENST00000472218	LPIN2	Q92539	896 aa		13.17	□□□□□ -0.3
RPS18-231	ENST00000472218	BRIP1	Q9BX63	1249 aa		13.17	□□□□□ -0.3
RPS18-231	ENST00000472218	PUS3	Q9BZE2	481 aa	Known RBP	13.17	□□□□□ -0.3
RPS18-231	ENST00000472218	DBNL	Q9UJU6	430 aa	Known RBP	13.17	□□□□□ -0.3
RPS18-231	ENST00000472218	RFX7	Q2KHR2	1363 aa		13.17	□□□□□ -0.3
RPS18-231	ENST00000472218		A0A1B0GUL7	405 aa		13.16	□□□□□ -0.3
RPS18-231	ENST00000472218	DDR1	Q08345	913 aa		13.16	□□□□□ -0.3
RPS18-231	ENST00000472218	ATP2B3	Q16720	1220 aa		13.16	□□□□□ -0.3
RPS18-231	ENST00000472218	CCDC158	Q5M9N0	1113 aa		13.16	□□□□□ -0.3
RPS18-231	ENST00000472218	TBC1D9	Q6ZT07	1266 aa		13.16	□□□□□ -0.3
RPS18-231	ENST00000472218	CCDC85A	Q96PX6	553 aa	Predicted RBP	13.16	□□□□□ -0.3
RPS18-231	ENST00000472218	ANKRD2	Q9GZV1	360 aa		13.16	□□□□□ -0.3
RPS18-231	ENST00000472218	CCDC8	Q9H0W5	538 aa	Predicted RBP	13.16	□□□□□ -0.3
RPS18-231	ENST00000472218	RBM19	Q9Y4C8	960 aa	Known RBP	13.16	□□□□□ -0.3
RPS18-231	ENST00000472218	PARP3	Q9Y6F1	533 aa		13.16	□□□□□ -0.3
RPS18-231	ENST00000472218	QSER1	Q2KHR3	1735 aa		13.16	□□□□□ -0.3
RPS18-231	ENST00000472218	DDX60	Q8IY21	1712 aa	Known RBP	13.16	□□□□□ -0.3
RPS18-231	ENST00000472218	SLC5A1	P13866	664 aa		13.15	□□□□□ -0.3
RPS18-231	ENST00000472218	FGFR2	P21802	821 aa		13.15	□□□□□ -0.3
RPS18-231	ENST00000472218	GRAP	Q13588	217 aa		13.15	□□□□□ -0.3
RPS18-231	ENST00000472218	UBE4A	Q14139	1066 aa		13.15	□□□□□ -0.3
RPS18-231	ENST00000472218	GRAPL	Q8TC17	118 aa	Predicted RBP	13.15	□□□□□ -0.3
RPS18-231	ENST00000472218	CRAMP1	Q96RY5	1269 aa		13.15	□□□□□ -0.3
RPS18-231	ENST00000472218	HAUS7	Q99871	368 aa		13.15	□□□□□ -0.3
RPS18-231	ENST00000472218	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.15	□□□□□ -0.3
RPS18-231	ENST00000472218	SEC31B	Q9NQW1	1179 aa		13.15	□□□□□ -0.3
RPS18-231	ENST00000472218	TRIM6-TRIM34	B2RNG4	842 aa		13.14	□□□□□ -0.31
RPS18-231	ENST00000472218	BBOX1	O75936	387 aa		13.14	□□□□□ -0.31
RPS18-231	ENST00000472218	REC8	O95072	547 aa		13.14	□□□□□ -0.31
RPS18-231	ENST00000472218	MMP10	P09238	476 aa		13.14	□□□□□ -0.31
RPS18-231	ENST00000472218	IFIT1	P09914	478 aa	Known RBP	13.14	□□□□□ -0.31
RPS18-231	ENST00000472218	UQCRFS1P1	P0C7P4	283 aa		13.14	□□□□□ -0.31
RPS18-231	ENST00000472218	PDE6B	P35913	854 aa		13.14	□□□□□ -0.31
RPS18-231	ENST00000472218	LRRFIP1	Q32MZ4	808 aa	Known RBP	13.14	□□□□□ -0.31
RPS18-231	ENST00000472218	C3orf67	Q6ZVT6	689 aa		13.14	□□□□□ -0.31
RPS18-231	ENST00000472218	RBM17	Q96I25	401 aa	Known RBP	13.14	□□□□□ -0.31
RPS18-231	ENST00000472218	NEUROD6	Q96NK8	337 aa		13.14	□□□□□ -0.31
RPS18-231	ENST00000472218	DBNDD2	Q9BQY9	259 aa		13.14	□□□□□ -0.31
RPS18-231	ENST00000472218	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	13.14	□□□□□ -0.31
RPS18-231	ENST00000472218	IGSF3	O75054	1194 aa		13.13	□□□□□ -0.31
RPS18-231	ENST00000472218	TIMM10	P62072	90 aa		13.13	□□□□□ -0.31
RPS18-231	ENST00000472218	CHRND	Q07001	517 aa		13.13	□□□□□ -0.31
RPS18-231	ENST00000472218	GORAB	Q5T7V8	394 aa		13.13	□□□□□ -0.31
RPS18-231	ENST00000472218	IL27	Q8NEV9	243 aa		13.13	□□□□□ -0.31
RPS18-231	ENST00000472218	RUFY2	Q8WXA3	655 aa		13.13	□□□□□ -0.31
RPS18-231	ENST00000472218	RPGR	Q92834	1020 aa	Known RBP	13.13	□□□□□ -0.31
RPS18-231	ENST00000472218	XAGE2	Q96GT9	111 aa		13.13	□□□□□ -0.31
RPS18-231	ENST00000472218	TLR7	Q9NYK1	1049 aa	Known RBP	13.13	□□□□□ -0.31
RPS18-231	ENST00000472218	MINPP1	Q9UNW1	487 aa		13.13	□□□□□ -0.31
RPS18-231	ENST00000472218	CHML	P26374	656 aa		13.12	□□□□□ -0.31
RPS18-231	ENST00000472218	RILPL2	Q969X0	211 aa		13.12	□□□□□ -0.31
RPS18-231	ENST00000472218	NRXN2	Q9P2S2	1712 aa		13.11	□□□□□ -0.31
RPS18-231	ENST00000472218	NPR1	P16066	1061 aa		13.11	□□□□□ -0.31
RPS18-231	ENST00000472218	TSHZ3	Q63HK5	1081 aa		13.11	□□□□□ -0.31
RPS18-231	ENST00000472218	CELF1	Q92879	486 aa	Known RBP	13.11	□□□□□ -0.31
RPS18-231	ENST00000472218	BCL11A	Q9H165	835 aa		13.11	□□□□□ -0.31
RPS18-231	ENST00000472218	LEMD3	Q9Y2U8	911 aa		13.11	□□□□□ -0.31
RPS18-231	ENST00000472218	RAD50	Q92878	1312 aa		13.11	□□□□□ -0.31
RPS18-231	ENST00000472218	ARID4A	P29374	1257 aa	Predicted RBP	13.1	□□□□□ -0.31
RPS18-231	ENST00000472218	ALDH1B1	P30837	517 aa		13.1	□□□□□ -0.31
RPS18-231	ENST00000472218	TTF1	Q15361	905 aa	Predicted RBP	13.1	□□□□□ -0.31
RPS18-231	ENST00000472218	TTC39A	Q5SRH9	613 aa		13.1	□□□□□ -0.31
RPS18-231	ENST00000472218	TMED8	Q6PL24	325 aa	Predicted RBP	13.1	□□□□□ -0.31
RPS18-231	ENST00000472218	C15orf52	Q6ZUT6	534 aa	Known RBP	13.1	□□□□□ -0.31
RPS18-231	ENST00000472218	TBC1D32	Q96NH3	1257 aa		13.1	□□□□□ -0.31
RPS18-231	ENST00000472218	BOLA2	Q9H3K6	86 aa		13.1	□□□□□ -0.31
RPS18-231	ENST00000472218	SNRK	Q9NRH2	765 aa		13.1	□□□□□ -0.31
RPS18-231	ENST00000472218	GNL3L	Q9NVN8	582 aa	Known RBP	13.1	□□□□□ -0.31
RPS18-231	ENST00000472218	TUBGCP6	Q96RT7	1819 aa		13.09	□□□□□ -0.31
RPS18-231	ENST00000472218	SEMA3E	O15041	775 aa		13.09	□□□□□ -0.31
RPS18-231	ENST00000472218	SRGN	P10124	158 aa		13.09	□□□□□ -0.31
RPS18-231	ENST00000472218	ANP32A	P39687	249 aa	Known RBP	13.09	□□□□□ -0.31
RPS18-231	ENST00000472218	RBM25	P49756	843 aa	Known RBP	13.09	□□□□□ -0.31
RPS18-231	ENST00000472218	KBTBD3	Q8NAB2	608 aa		13.09	□□□□□ -0.31
RPS18-231	ENST00000472218	MASTL	Q96GX5	879 aa		13.09	□□□□□ -0.31
RPS18-231	ENST00000472218	ESYT1	Q9BSJ8	1104 aa		13.09	□□□□□ -0.31
RPS18-231	ENST00000472218	ZNF804B	A4D1E1	1349 aa		13.09	□□□□□ -0.31
RPS18-231	ENST00000472218	PDS5A	Q29RF7	1337 aa	Known RBP	13.09	□□□□□ -0.31
RPS18-231	ENST00000472218	SEC24B	O95487	1268 aa		13.08	□□□□□ -0.32
RPS18-231	ENST00000472218	ZFY	P08048	801 aa	Predicted RBP	13.08	□□□□□ -0.32
RPS18-231	ENST00000472218	CAVIN4	Q5BKX8	364 aa		13.08	□□□□□ -0.32
RPS18-231	ENST00000472218	CCDC102B	Q68D86	513 aa		13.08	□□□□□ -0.32
RPS18-231	ENST00000472218	STYK1	Q6J9G0	422 aa		13.08	□□□□□ -0.32
RPS18-231	ENST00000472218	C22orf23	Q9BZE7	217 aa		13.08	□□□□□ -0.32
RPS18-231	ENST00000472218	DIAPH3	Q9NSV4	1193 aa		13.08	□□□□□ -0.32
RPS18-231	ENST00000472218	PAG1	Q9NWQ8	432 aa		13.08	□□□□□ -0.32
RPS18-231	ENST00000472218	PODXL2	Q9NZ53	605 aa		13.08	□□□□□ -0.32
RPS18-231	ENST00000472218	XDH	P47989	1333 aa		13.08	□□□□□ -0.32
RPS18-231	ENST00000472218	SPEF2	Q9C093	1822 aa		13.07	□□□□□ -0.32
RPS18-231	ENST00000472218	SGSM2	O43147	1006 aa		13.07	□□□□□ -0.32
RPS18-231	ENST00000472218	ATP2B4	P23634	1241 aa		13.07	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms