RNA–Protein interactions for RNA: ENST00000471245.1

CKS1B-204, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best)

Gene CKS1B, Length 1,166 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-204ENST00000471245 METTL5Q9NRN9 209 aaKnown RBP8.91□□□□□ -0.98
CKS1B-204ENST00000471245 FOXD3Q9UJU5 478 aaPredicted RBP8.91□□□□□ -0.98
CKS1B-204ENST00000471245 USP20Q9Y2K6 914 aa8.91□□□□□ -0.98
CKS1B-204ENST00000471245 CCDC88BA6NC98 1476 aa8.9□□□□□ -0.98
CKS1B-204ENST00000471245 FAM181BA6NEQ2 426 aa8.9□□□□□ -0.98
CKS1B-204ENST00000471245 CRELD1Q96HD1 420 aa8.9□□□□□ -0.98
CKS1B-204ENST00000471245 ZFYVE28Q9HCC9 887 aa8.9□□□□□ -0.98
CKS1B-204ENST00000471245 BRD7Q9NPI1 651 aa8.9□□□□□ -0.98
CKS1B-204ENST00000471245 AK5Q9Y6K8 562 aa8.9□□□□□ -0.98
CKS1B-204ENST00000471245 POLA1P09884 1462 aaPredicted RBP8.89□□□□□ -0.99
CKS1B-204ENST00000471245 GIPC1O14908 333 aa8.89□□□□□ -0.99
CKS1B-204ENST00000471245 IGSF3O75054 1194 aa8.89□□□□□ -0.99
CKS1B-204ENST00000471245 PHACTR2O75167 634 aa8.89□□□□□ -0.99
CKS1B-204ENST00000471245 XYLBO75191 536 aa8.89□□□□□ -0.99
CKS1B-204ENST00000471245 MAPTP10636 758 aaKnown RBP8.89□□□□□ -0.99
CKS1B-204ENST00000471245 TMEM87AQ8NBN3 555 aa8.89□□□□□ -0.99
CKS1B-204ENST00000471245 CCDC74AQ96AQ1 378 aa8.89□□□□□ -0.99
CKS1B-204ENST00000471245 COL25A1Q9BXS0 654 aaPredicted RBP8.89□□□□□ -0.99
CKS1B-204ENST00000471245 TMEM63CQ9P1W3 806 aa8.89□□□□□ -0.99
CKS1B-204ENST00000471245 SYNJ1O43426 1573 aa8.89□□□□□ -0.99
CKS1B-204ENST00000471245 GMPRP36959 345 aa8.88□□□□□ -0.99
CKS1B-204ENST00000471245 ZC3H6P61129 1189 aaKnown RBP8.88□□□□□ -0.99
CKS1B-204ENST00000471245 HDLBPQ00341 1268 aaKnown RBP8.88□□□□□ -0.99
CKS1B-204ENST00000471245 GAS6Q14393 721 aa8.88□□□□□ -0.99
CKS1B-204ENST00000471245 NLRP13Q86W25 1043 aa8.88□□□□□ -0.99
CKS1B-204ENST00000471245 EFCC1Q9HA90 598 aa8.88□□□□□ -0.99
CKS1B-204ENST00000471245 MBIPQ9NS73 344 aa8.88□□□□□ -0.99
CKS1B-204ENST00000471245 NSFL1CQ9UNZ2 370 aaKnown RBP8.88□□□□□ -0.99
CKS1B-204ENST00000471245 FGFR3P22607 806 aa8.87□□□□□ -0.99
CKS1B-204ENST00000471245 EIF4BP23588 611 aaKnown RBP8.87□□□□□ -0.99
CKS1B-204ENST00000471245 FANCCQ00597 558 aa8.87□□□□□ -0.99
CKS1B-204ENST00000471245 SRSF11Q05519 484 aaKnown RBP8.87□□□□□ -0.99
CKS1B-204ENST00000471245 USPL1Q5W0Q7 1092 aa8.87□□□□□ -0.99
CKS1B-204ENST00000471245 ABHD17AQ96GS6 310 aa8.87□□□□□ -0.99
CKS1B-204ENST00000471245 CHRDQ9H2X0 955 aa8.87□□□□□ -0.99
CKS1B-204ENST00000471245 ABI2Q9NYB9 513 aaPredicted RBP8.87□□□□□ -0.99
CKS1B-204ENST00000471245 MARK1Q9P0L2 795 aa8.87□□□□□ -0.99
CKS1B-204ENST00000471245 SNAPC4Q5SXM2 1469 aa8.87□□□□□ -0.99
CKS1B-204ENST00000471245 WDR97A6NE52 1622 aa8.87□□□□□ -0.99
CKS1B-204ENST00000471245 RAD54L2Q9Y4B4 1467 aa8.86□□□□□ -0.99
CKS1B-204ENST00000471245 GPR25O00155 361 aa8.86□□□□□ -0.99
CKS1B-204ENST00000471245 KHNYNO15037 678 aaKnown RBP8.86□□□□□ -0.99
CKS1B-204ENST00000471245 MX2P20592 715 aa8.86□□□□□ -0.99
CKS1B-204ENST00000471245 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.86□□□□□ -0.99
CKS1B-204ENST00000471245 PMEPA1Q969W9 287 aa8.86□□□□□ -0.99
CKS1B-204ENST00000471245 C12orf49Q9H741 205 aa8.86□□□□□ -0.99
CKS1B-204ENST00000471245 NLRP2Q9NX02 1062 aa8.86□□□□□ -0.99
CKS1B-204ENST00000471245 SLURP2P0DP57 97 aa8.85□□□□□ -0.99
CKS1B-204ENST00000471245 ERCC5P28715 1186 aaPredicted RBP8.85□□□□□ -0.99
CKS1B-204ENST00000471245 MAP2K3P46734 347 aa8.85□□□□□ -0.99
CKS1B-204ENST00000471245 KRT76Q01546 638 aa8.85□□□□□ -0.99
CKS1B-204ENST00000471245 RNFT1Q5M7Z0 435 aa8.85□□□□□ -0.99
CKS1B-204ENST00000471245 METTL16Q86W50 562 aaKnown RBP8.85□□□□□ -0.99
CKS1B-204ENST00000471245 GALNT12Q8IXK2 581 aa8.85□□□□□ -0.99
CKS1B-204ENST00000471245 SRCIN1Q9C0H9 1055 aa8.85□□□□□ -0.99
CKS1B-204ENST00000471245 AVENQ9NQS1 362 aaPredicted RBP8.85□□□□□ -0.99
CKS1B-204ENST00000471245 KCNH4Q9UQ05 1017 aa8.85□□□□□ -0.99
CKS1B-204ENST00000471245 CTSHP09668 335 aa8.84□□□□□ -0.99
CKS1B-204ENST00000471245 ZNF76P36508 570 aa8.84□□□□□ -0.99
CKS1B-204ENST00000471245 RNF34Q969K3 372 aa8.84□□□□□ -0.99
CKS1B-204ENST00000471245 LRRC4BQ9NT99 713 aa8.84□□□□□ -0.99
CKS1B-204ENST00000471245 HCN2Q9UL51 889 aa8.84□□□□□ -0.99
CKS1B-204ENST00000471245 KIF13AQ9H1H9 1805 aa8.84□□□□□ -0.99
CKS1B-204ENST00000471245 PBRM1Q86U86 1689 aa8.84□□□□□ -0.99
CKS1B-204ENST00000471245 TDRD9Q8NDG6 1382 aaKnown RBP8.84□□□□□ -0.99
CKS1B-204ENST00000471245 GAPVD1Q14C86 1478 aa8.83□□□□□ -1
CKS1B-204ENST00000471245 DCDC2BA2VCK2 349 aa8.83□□□□□ -1
CKS1B-204ENST00000471245 IRS1P35568 1242 aa8.83□□□□□ -1
CKS1B-204ENST00000471245 CTBSQ01459 385 aa8.83□□□□□ -1
CKS1B-204ENST00000471245 TTC39BQ5VTQ0 682 aaPredicted RBP8.83□□□□□ -1
CKS1B-204ENST00000471245 C1orf127Q8N9H9 656 aa8.83□□□□□ -1
CKS1B-204ENST00000471245 EPS8L3Q8TE67 593 aaKnown RBP8.83□□□□□ -1
CKS1B-204ENST00000471245 CNTNAP3BQ96NU0 1288 aa8.83□□□□□ -1
CKS1B-204ENST00000471245 CNTNAP3Q9BZ76 1288 aa8.83□□□□□ -1
CKS1B-204ENST00000471245 NPHS2Q9NP85 383 aa8.83□□□□□ -1
CKS1B-204ENST00000471245 MAGI1Q96QZ7 1491 aaPredicted RBP8.83□□□□□ -1
CKS1B-204ENST00000471245 RAD51AP2Q09MP3 1159 aa8.82□□□□□ -1
CKS1B-204ENST00000471245 SFSWAPQ12872 951 aaKnown RBP8.82□□□□□ -1
CKS1B-204ENST00000471245 CCINQ13939 588 aa8.82□□□□□ -1
CKS1B-204ENST00000471245 PI16Q6UXB8 463 aa8.82□□□□□ -1
CKS1B-204ENST00000471245 OSBPL7Q9BZF2 842 aa8.82□□□□□ -1
CKS1B-204ENST00000471245 CNTN3Q9P232 1028 aa8.82□□□□□ -1
CKS1B-204ENST00000471245 FAM8A1Q9UBU6 413 aa8.82□□□□□ -1
CKS1B-204ENST00000471245 SOGA1O94964 1423 aa8.81□□□□□ -1
CKS1B-204ENST00000471245 C2CD2LO14523 706 aa8.81□□□□□ -1
CKS1B-204ENST00000471245 EREGO14944 169 aa8.81□□□□□ -1
CKS1B-204ENST00000471245 CES1P23141 567 aa8.81□□□□□ -1
CKS1B-204ENST00000471245 NT5DC4Q86YG4 428 aa8.81□□□□□ -1
CKS1B-204ENST00000471245 GSX2Q9BZM3 304 aa8.81□□□□□ -1
CKS1B-204ENST00000471245 STRN4Q9NRL3 753 aa8.81□□□□□ -1
CKS1B-204ENST00000471245 IGF1RP08069 1367 aa8.81□□□□□ -1
CKS1B-204ENST00000471245 ARAFP10398 606 aa8.8□□□□□ -1
CKS1B-204ENST00000471245 BMP4P12644 408 aa8.8□□□□□ -1
CKS1B-204ENST00000471245 ST13P50502 369 aaKnown RBP8.8□□□□□ -1
CKS1B-204ENST00000471245 OR13H1Q8NG92 308 aa8.8□□□□□ -1
CKS1B-204ENST00000471245 TGIF2Q9GZN2 237 aa8.8□□□□□ -1
CKS1B-204ENST00000471245 SUV39H2Q9H5I1 410 aa8.8□□□□□ -1
CKS1B-204ENST00000471245 USP35Q9P2H5 1018 aa8.8□□□□□ -1
CKS1B-204ENST00000471245 SYNJ2O15056 1496 aa8.8□□□□□ -1
CKS1B-204ENST00000471245 GRIN2BQ13224 1484 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms