RNA–Protein interactions for RNA: ENST00000470171.5

FDPS-208, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 746 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-208ENST00000470171 DCAF8Q5TAQ9 597 aa19.49■□□□□ 0.71
FDPS-208ENST00000470171 USP50Q70EL3 339 aaPredicted RBP19.49■□□□□ 0.71
FDPS-208ENST00000470171 GJA3Q9Y6H8 435 aa19.49■□□□□ 0.71
FDPS-208ENST00000470171 KIF16BQ96L93 1317 aa19.49■□□□□ 0.71
FDPS-208ENST00000470171 IPO8O15397 1037 aaKnown RBP19.48■□□□□ 0.71
FDPS-208ENST00000470171 UFL1O94874 794 aa19.48■□□□□ 0.71
FDPS-208ENST00000470171 MMP14P50281 582 aa19.48■□□□□ 0.71
FDPS-208ENST00000470171 CXCL9Q07325 125 aa19.48■□□□□ 0.71
FDPS-208ENST00000470171 CCDC57Q2TAC2 916 aa19.48■□□□□ 0.71
FDPS-208ENST00000470171 PODNQ7Z5L7 613 aa19.48■□□□□ 0.71
FDPS-208ENST00000470171 DPF2Q92785 391 aa19.48■□□□□ 0.71
FDPS-208ENST00000470171 MINPP1Q9UNW1 487 aa19.48■□□□□ 0.71
FDPS-208ENST00000470171 TIAM2Q8IVF5 1701 aa19.48■□□□□ 0.71
FDPS-208ENST00000470171 DICER1Q9UPY3 1922 aaKnown RBP19.47■□□□□ 0.71
FDPS-208ENST00000470171 CCDC85AQ96PX6 553 aaPredicted RBP19.47■□□□□ 0.71
FDPS-208ENST00000470171 DDX60Q8IY21 1712 aaKnown RBP19.47■□□□□ 0.71
FDPS-208ENST00000470171 LAMB2P55268 1798 aa19.47■□□□□ 0.71
FDPS-208ENST00000470171 FOXO4P98177 505 aa19.46■□□□□ 0.71
FDPS-208ENST00000470171 HNRNPUQ00839 825 aaKnown RBP eCLIP19.46■□□□□ 0.713e-6■■■□□ 17.5
FDPS-208ENST00000470171 ADARB2Q9NS39 739 aaKnown RBP19.46■□□□□ 0.71
FDPS-208ENST00000470171 RARSP54136 660 aaKnown RBP19.45■□□□□ 0.7
FDPS-208ENST00000470171 BCL2L13Q9BXK5 485 aa19.45■□□□□ 0.7
FDPS-208ENST00000470171 GPRC5DQ9NZD1 345 aa19.45■□□□□ 0.7
FDPS-208ENST00000470171 SCNN1DP51172 638 aa19.44■□□□□ 0.7
FDPS-208ENST00000470171 FAM161AQ3B820 660 aa19.44■□□□□ 0.7
FDPS-208ENST00000470171 TAF7LQ5H9L4 462 aa19.44■□□□□ 0.7
FDPS-208ENST00000470171 LMBR1LQ6UX01 489 aa19.44■□□□□ 0.7
FDPS-208ENST00000470171 ZC3H15Q8WU90 426 aaKnown RBP19.44■□□□□ 0.7
FDPS-208ENST00000470171 MED23Q9ULK4 1368 aa19.44■□□□□ 0.7
FDPS-208ENST00000470171 LRRC37AA6NMS7 1700 aa19.43■□□□□ 0.7
FDPS-208ENST00000470171 H7C1D1 291 aa19.43■□□□□ 0.7
FDPS-208ENST00000470171 ECE2O60344 883 aa19.43■□□□□ 0.7
FDPS-208ENST00000470171 ZBED9Q6R2W3 1325 aa19.43■□□□□ 0.7
FDPS-208ENST00000470171 RIMBP2O15034 1052 aa19.42■□□□□ 0.7
FDPS-208ENST00000470171 RABL6Q3YEC7 729 aaPredicted RBP19.42■□□□□ 0.7
FDPS-208ENST00000470171 EAPPQ56P03 285 aaPredicted RBP19.42■□□□□ 0.7
FDPS-208ENST00000470171 COA1Q9GZY4 146 aa19.42■□□□□ 0.7
FDPS-208ENST00000470171 NOB1Q9ULX3 412 aaKnown RBP19.42■□□□□ 0.7
FDPS-208ENST00000470171 CLEC11AQ9Y240 323 aa19.42■□□□□ 0.7
FDPS-208ENST00000470171 CHMP3Q9Y3E7 222 aa19.42■□□□□ 0.7
FDPS-208ENST00000470171 RAD17O75943 681 aa19.41■□□□□ 0.7
FDPS-208ENST00000470171 VIL1P09327 827 aaKnown RBP19.41■□□□□ 0.7
FDPS-208ENST00000470171 KCNJ4P48050 445 aa19.41■□□□□ 0.7
FDPS-208ENST00000470171 GMPSP49915 693 aaPredicted RBP19.41■□□□□ 0.7
FDPS-208ENST00000470171 LDHAL6AQ6ZMR3 332 aa19.41■□□□□ 0.7
FDPS-208ENST00000470171 C15orf52Q6ZUT6 534 aaKnown RBP19.41■□□□□ 0.7
FDPS-208ENST00000470171 AGBL3Q8NEM8 1001 aa19.41■□□□□ 0.7
FDPS-208ENST00000470171 ZNF804BA4D1E1 1349 aa19.41■□□□□ 0.7
FDPS-208ENST00000470171 CACNA1SQ13698 1873 aa19.41■□□□□ 0.7
FDPS-208ENST00000470171 SCN4AP35499 1836 aa19.4■□□□□ 0.7
FDPS-208ENST00000470171 YDJCA8MPS7 323 aa19.4■□□□□ 0.7
FDPS-208ENST00000470171 NBPF7P0C2Y1 421 aaPredicted RBP19.4■□□□□ 0.7
FDPS-208ENST00000470171 USP44Q9H0E7 712 aa19.4■□□□□ 0.7
FDPS-208ENST00000470171 DBNDD1Q9H9R9 158 aa19.4■□□□□ 0.7
FDPS-208ENST00000470171 ZNF609O15014 1411 aa19.4■□□□□ 0.7
FDPS-208ENST00000470171 EPS15P42566 896 aa19.39■□□□□ 0.69
FDPS-208ENST00000470171 CHRNDQ07001 517 aa19.39■□□□□ 0.69
FDPS-208ENST00000470171 SLC51AQ86UW1 340 aa19.39■□□□□ 0.69
FDPS-208ENST00000470171 PGAP2Q9UHJ9 254 aa19.39■□□□□ 0.69
FDPS-208ENST00000470171 CNOT7Q9UIV1 285 aaKnown RBP19.39■□□□□ 0.69
FDPS-208ENST00000470171 MYO3BQ8WXR4 1341 aa19.39■□□□□ 0.69
FDPS-208ENST00000470171 DUOX1Q9NRD9 1551 aa19.39■□□□□ 0.69
FDPS-208ENST00000470171 COL4A5P29400 1685 aa19.39■□□□□ 0.69
FDPS-208ENST00000470171 USP17L3A6NCW0 530 aa19.38■□□□□ 0.69
FDPS-208ENST00000470171 USP17L4A6NCW7 530 aa19.38■□□□□ 0.69
FDPS-208ENST00000470171 PSMD14O00487 310 aa19.38■□□□□ 0.69
FDPS-208ENST00000470171 DOK7Q18PE1 504 aa19.38■□□□□ 0.69
FDPS-208ENST00000470171 MROH5Q6ZUA9 1318 aa19.38■□□□□ 0.69
FDPS-208ENST00000470171 USP17L1Q7RTZ2 530 aa19.38■□□□□ 0.69
FDPS-208ENST00000470171 CNTROBQ8N137 903 aa19.38■□□□□ 0.69
FDPS-208ENST00000470171 SUCLG2Q96I99 432 aa19.38■□□□□ 0.69
FDPS-208ENST00000470171 CNNM1Q9NRU3 951 aa19.38■□□□□ 0.69
FDPS-208ENST00000470171 CREBZFQ9NS37 354 aa19.38■□□□□ 0.69
FDPS-208ENST00000470171 FBXO3Q9UK99 471 aa19.38■□□□□ 0.69
FDPS-208ENST00000470171 EPHA10Q5JZY3 1008 aa19.37■□□□□ 0.69
FDPS-208ENST00000470171 INTS3Q68E01 1043 aaKnown RBP19.37■□□□□ 0.69
FDPS-208ENST00000470171 PASKQ96RG2 1323 aa19.36■□□□□ 0.69
FDPS-208ENST00000470171 ITGBL1O95965 494 aaPredicted RBP19.36■□□□□ 0.69
FDPS-208ENST00000470171 GNAI3P08754 354 aa19.36■□□□□ 0.69
FDPS-208ENST00000470171 UBTFL1P0CB47 393 aaPredicted RBP19.36■□□□□ 0.69
FDPS-208ENST00000470171 UBE4AQ14139 1066 aa19.36■□□□□ 0.69
FDPS-208ENST00000470171 STRIP1Q5VSL9 837 aa19.36■□□□□ 0.69
FDPS-208ENST00000470171 RSBN1LQ6PCB5 846 aaPredicted RBP19.36■□□□□ 0.69
FDPS-208ENST00000470171 BICC1Q9H694 974 aaKnown RBP19.36■□□□□ 0.69
FDPS-208ENST00000470171 CCDC88AQ3V6T2 1871 aa19.36■□□□□ 0.69
FDPS-208ENST00000470171 ATF7IPQ6VMQ6 1270 aa19.35■□□□□ 0.69
FDPS-208ENST00000470171 KAZALD1Q96I82 304 aa19.35■□□□□ 0.69
FDPS-208ENST00000470171 ZNF804AQ7Z570 1209 aa19.34■□□□□ 0.69
FDPS-208ENST00000470171 MICALL2Q8IY33 904 aa19.34■□□□□ 0.69
FDPS-208ENST00000470171 DNAJC5GQ8N7S2 189 aa19.34■□□□□ 0.69
FDPS-208ENST00000470171 TMEM88BA6NKF7 163 aa19.33■□□□□ 0.68
FDPS-208ENST00000470171 POTEIP0CG38 1075 aa19.33■□□□□ 0.68
FDPS-208ENST00000470171 POTEJP0CG39 1038 aa19.33■□□□□ 0.68
FDPS-208ENST00000470171 ZNF280AP59817 542 aaPredicted RBP19.33■□□□□ 0.68
FDPS-208ENST00000470171 ZKSCAN2Q63HK3 967 aa19.33■□□□□ 0.68
FDPS-208ENST00000470171 CDC37L1Q7L3B6 337 aa19.33■□□□□ 0.68
FDPS-208ENST00000470171 OGFOD1Q8N543 542 aa19.33■□□□□ 0.68
FDPS-208ENST00000470171 KLRG1Q96E93 195 aa19.33■□□□□ 0.68
FDPS-208ENST00000470171 LTBP1Q14766 1721 aa19.33■□□□□ 0.68
FDPS-208ENST00000470171 USP17L8P0C7I0 530 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms