RNA–Protein interactions for RNA: ENST00000466780.5

PDZRN3-205, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-205ENST00000466780 SEC62Q99442 399 aaKnown RBP15.28■□□□□ 0.04
PDZRN3-205ENST00000466780 LRRC2Q9BYS8 371 aa15.28■□□□□ 0.04
PDZRN3-205ENST00000466780 DDX21Q9NR30 783 aaKnown RBP eCLIP15.28■□□□□ 0.04
PDZRN3-205ENST00000466780 ZNF609O15014 1411 aa15.28■□□□□ 0.04
PDZRN3-205ENST00000466780 GOLGA6L19H0YKK7 550 aa15.27■□□□□ 0.04
PDZRN3-205ENST00000466780 HSP90B1P14625 803 aaKnown RBP15.27■□□□□ 0.04
PDZRN3-205ENST00000466780 NCAPD2Q15021 1401 aa15.27■□□□□ 0.04
PDZRN3-205ENST00000466780 C1orf141Q5JVX7 400 aa15.27■□□□□ 0.04
PDZRN3-205ENST00000466780 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.27■□□□□ 0.03
PDZRN3-205ENST00000466780 DDX58O95786 925 aaKnown RBP15.27■□□□□ 0.03
PDZRN3-205ENST00000466780 ATP5JP18859 108 aa15.27■□□□□ 0.03
PDZRN3-205ENST00000466780 SNW1Q13573 536 aaKnown RBP15.27■□□□□ 0.03
PDZRN3-205ENST00000466780 STX1AQ16623 288 aa15.27■□□□□ 0.03
PDZRN3-205ENST00000466780 AMOTQ4VCS5 1084 aa15.27■□□□□ 0.03
PDZRN3-205ENST00000466780 NYAP1Q6ZVC0 841 aa15.27■□□□□ 0.03
PDZRN3-205ENST00000466780 CCAR1Q8IX12 1150 aaKnown RBP15.27■□□□□ 0.03
PDZRN3-205ENST00000466780 ZNF592Q92610 1267 aa15.27■□□□□ 0.03
PDZRN3-205ENST00000466780 CGNQ9P2M7 1197 aaKnown RBP15.27■□□□□ 0.03
PDZRN3-205ENST00000466780 RCOR1Q9UKL0 485 aa15.27■□□□□ 0.03
PDZRN3-205ENST00000466780 STOX1Q6ZVD7 989 aa15.26■□□□□ 0.03
PDZRN3-205ENST00000466780 DDX41Q9UJV9 622 aaKnown RBP15.26■□□□□ 0.03
PDZRN3-205ENST00000466780 USP16Q9Y5T5 823 aa15.26■□□□□ 0.03
PDZRN3-205ENST00000466780 NEURL1BA8MQ27 555 aa15.26■□□□□ 0.03
PDZRN3-205ENST00000466780 CTDNEP1O95476 244 aa15.26■□□□□ 0.03
PDZRN3-205ENST00000466780 FOSBP53539 338 aa15.26■□□□□ 0.03
PDZRN3-205ENST00000466780 DHX40Q8IX18 779 aaKnown RBP15.26■□□□□ 0.03
PDZRN3-205ENST00000466780 BCL11BQ9C0K0 894 aaPredicted RBP15.26■□□□□ 0.03
PDZRN3-205ENST00000466780 U3KPZ7 1027 aaPredicted RBP15.26■□□□□ 0.03
PDZRN3-205ENST00000466780 MYH15Q9Y2K3 1946 aa15.26■□□□□ 0.03
PDZRN3-205ENST00000466780 OVOS2A0A0G2JMS6 1433 aa15.26■□□□□ 0.03
PDZRN3-205ENST00000466780 CCZ1BP86790 482 aa15.25■□□□□ 0.03
PDZRN3-205ENST00000466780 CCZ1P86791 482 aaPredicted RBP15.25■□□□□ 0.03
PDZRN3-205ENST00000466780 NSUN7Q8NE18 718 aaKnown RBP15.25■□□□□ 0.03
PDZRN3-205ENST00000466780 CTAGE5O15320 804 aa15.25■□□□□ 0.03
PDZRN3-205ENST00000466780 PFKFB2O60825 505 aa15.25■□□□□ 0.03
PDZRN3-205ENST00000466780 SKILP12757 684 aa15.25■□□□□ 0.03
PDZRN3-205ENST00000466780 GCKRQ14397 625 aa15.25■□□□□ 0.03
PDZRN3-205ENST00000466780 TNNI3KQ59H18 835 aa15.25■□□□□ 0.03
PDZRN3-205ENST00000466780 RIC3Q7Z5B4 369 aa15.25■□□□□ 0.03
PDZRN3-205ENST00000466780 ENGASEQ8NFI3 743 aa15.25■□□□□ 0.03
PDZRN3-205ENST00000466780 USP28Q96RU2 1077 aa15.25■□□□□ 0.03
PDZRN3-205ENST00000466780 FPGT-TNNI3KV9GXZ4 949 aa15.25■□□□□ 0.03
PDZRN3-205ENST00000466780 NEMFO60524 1076 aa15.24■□□□□ 0.03
PDZRN3-205ENST00000466780 RFX5P48382 616 aaPredicted RBP15.24■□□□□ 0.03
PDZRN3-205ENST00000466780 NAA16Q6N069 864 aaPredicted RBP15.24■□□□□ 0.03
PDZRN3-205ENST00000466780 KCNH5Q8NCM2 988 aa15.24■□□□□ 0.03
PDZRN3-205ENST00000466780 CCDC69A6NI79 296 aa15.24■□□□□ 0.03
PDZRN3-205ENST00000466780 TFCP2Q12800 502 aa15.24■□□□□ 0.03
PDZRN3-205ENST00000466780 LLPHQ9BRT6 129 aaKnown RBP15.24■□□□□ 0.03
PDZRN3-205ENST00000466780 COPRSQ9NQ92 184 aa15.24■□□□□ 0.03
PDZRN3-205ENST00000466780 ZNF215Q9UL58 517 aaPredicted RBP15.24■□□□□ 0.03
PDZRN3-205ENST00000466780 SIPA1L3O60292 1781 aaPredicted RBP15.24■□□□□ 0.03
PDZRN3-205ENST00000466780 FILIP1Q7Z7B0 1213 aa15.23■□□□□ 0.03
PDZRN3-205ENST00000466780 KIF18AQ8NI77 898 aa15.23■□□□□ 0.03
PDZRN3-205ENST00000466780 MORC2Q9Y6X9 1032 aaPredicted RBP15.23■□□□□ 0.03
PDZRN3-205ENST00000466780 PTPN12Q05209 780 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-205ENST00000466780 PTPN14Q15678 1187 aa15.23■□□□□ 0.03
PDZRN3-205ENST00000466780 MCMDC2Q4G0Z9 681 aa15.23■□□□□ 0.03
PDZRN3-205ENST00000466780 ORAI2Q96SN7 254 aa15.23■□□□□ 0.03
PDZRN3-205ENST00000466780 DNAJC2Q99543 621 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-205ENST00000466780 PHRF1Q9P1Y6 1649 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-205ENST00000466780 PTPDC1A2A3K4 754 aa15.23■□□□□ 0.03
PDZRN3-205ENST00000466780 ERCC4Q92889 916 aaPredicted RBP15.23■□□□□ 0.03
PDZRN3-205ENST00000466780 DBNDD2Q9BQY9 259 aa15.23■□□□□ 0.03
PDZRN3-205ENST00000466780 TRMT1Q9NXH9 659 aaKnown RBP15.23■□□□□ 0.03
PDZRN3-205ENST00000466780 RFX7Q2KHR2 1363 aa15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 LAMA4Q16363 1823 aa15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 BECN2A8MW95 431 aa15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 APOBRQ0VD83 1088 aa15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 KMT5BQ4FZB7 885 aa15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 CCDC73Q6ZRK6 1079 aa15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 ILDR1Q86SU0 546 aaPredicted RBP15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 MYD88Q99836 296 aa15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 V9GYY5 206 aaPredicted RBP15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 ERBB3P21860 1342 aa15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 MYL6BP14649 208 aa15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 FAM160A1Q05DH4 1040 aa15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 DDX46Q7L014 1031 aaKnown RBP15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 CCAR2Q8N163 923 aaKnown RBP15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 XAGE3Q8WTP9 111 aa15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 ANO10Q9NW15 660 aa15.22■□□□□ 0.03
PDZRN3-205ENST00000466780 KINO60870 393 aaKnown RBP15.21■□□□□ 0.03
PDZRN3-205ENST00000466780 GCP02774 474 aa15.21■□□□□ 0.03
PDZRN3-205ENST00000466780 NEXNQ0ZGT2 675 aa15.21■□□□□ 0.03
PDZRN3-205ENST00000466780 SLC39A6Q13433 755 aa15.21■□□□□ 0.03
PDZRN3-205ENST00000466780 SLFNL1Q499Z3 407 aa15.21■□□□□ 0.03
PDZRN3-205ENST00000466780 DHX32Q7L7V1 743 aaKnown RBP15.21■□□□□ 0.03
PDZRN3-205ENST00000466780 AOPEPQ8N6M6 819 aa15.21■□□□□ 0.03
PDZRN3-205ENST00000466780 FSIP1Q8NA03 581 aa15.21■□□□□ 0.03
PDZRN3-205ENST00000466780 HAUS7Q99871 368 aa15.21■□□□□ 0.03
PDZRN3-205ENST00000466780 PPFIA3O75145 1194 aa15.21■□□□□ 0.02
PDZRN3-205ENST00000466780 FGD1P98174 961 aa15.21■□□□□ 0.02
PDZRN3-205ENST00000466780 GABPB1Q06547 395 aaPredicted RBP15.21■□□□□ 0.02
PDZRN3-205ENST00000466780 NBPF11Q86T75 865 aa15.21■□□□□ 0.02
PDZRN3-205ENST00000466780 METTL22Q9BUU2 404 aaPredicted RBP15.21■□□□□ 0.02
PDZRN3-205ENST00000466780 SALL1Q9NSC2 1324 aa15.2■□□□□ 0.02
PDZRN3-205ENST00000466780 A0A0G2JLW4 131 aa15.2■□□□□ 0.02
PDZRN3-205ENST00000466780 CCT2P78371 535 aaKnown RBP15.2■□□□□ 0.02
PDZRN3-205ENST00000466780 EXOSC10Q01780 885 aaKnown RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms