RNA–Protein interactions for RNA: ENST00000466707.1

ABCA2-213, Transcript of ATP binding cassette subfamily A member 2, human

TSL 2

Gene ABCA2, Length 555 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-213	ENST00000466707	PDE8A	O60658	829 aa		32.76	■■■□□ 2.83
ABCA2-213	ENST00000466707	DDX58	O95786	925 aa	Known RBP	32.76	■■■□□ 2.83
ABCA2-213	ENST00000466707	HSPA8	P11142	646 aa	Known RBP	32.76	■■■□□ 2.83
ABCA2-213	ENST00000466707	DPF2	Q92785	391 aa		32.76	■■■□□ 2.83
ABCA2-213	ENST00000466707	EYA3	Q99504	573 aa		32.76	■■■□□ 2.83
ABCA2-213	ENST00000466707	PODXL2	Q9NZ53	605 aa		32.76	■■■□□ 2.83
ABCA2-213	ENST00000466707		H7C1D1	291 aa		32.75	■■■□□ 2.83
ABCA2-213	ENST00000466707	EGFR	P00533	1210 aa		32.75	■■■□□ 2.83
ABCA2-213	ENST00000466707	MAP2K1	Q02750	393 aa	Predicted RBP	32.75	■■■□□ 2.83
ABCA2-213	ENST00000466707	CCDC152	Q4G0S7	254 aa		32.75	■■■□□ 2.83
ABCA2-213	ENST00000466707	SAMD7	Q7Z3H4	446 aa		32.75	■■■□□ 2.83
ABCA2-213	ENST00000466707	PSME4	Q14997	1843 aa		32.74	■■■□□ 2.83
ABCA2-213	ENST00000466707	ECE1	P42892	770 aa		32.74	■■■□□ 2.83
ABCA2-213	ENST00000466707	SAPCD2	Q86UD0	394 aa		32.74	■■■□□ 2.83
ABCA2-213	ENST00000466707	POLR2A	P24928	1970 aa	Known RBP	32.74	■■■□□ 2.83
ABCA2-213	ENST00000466707	UFL1	O94874	794 aa		32.73	■■■□□ 2.83
ABCA2-213	ENST00000466707	IGKV5-2	P06315	115 aa		32.73	■■■□□ 2.83
ABCA2-213	ENST00000466707	HSP90B1	P14625	803 aa	Known RBP	32.73	■■■□□ 2.83
ABCA2-213	ENST00000466707	DLK2	Q6UY11	383 aa		32.73	■■■□□ 2.83
ABCA2-213	ENST00000466707	WWC1	Q8IX03	1113 aa		32.73	■■■□□ 2.83
ABCA2-213	ENST00000466707	ZNF408	Q9H9D4	720 aa		32.73	■■■□□ 2.83
ABCA2-213	ENST00000466707	PI4KAP2	A4QPH2	592 aa		32.72	■■■□□ 2.83
ABCA2-213	ENST00000466707	CCDC27	Q2M243	656 aa		32.72	■■■□□ 2.83
ABCA2-213	ENST00000466707	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	32.72	■■■□□ 2.83
ABCA2-213	ENST00000466707	PI4KAP1	Q8N8J0	262 aa		32.72	■■■□□ 2.83
ABCA2-213	ENST00000466707	AOC2	O75106	756 aa		32.71	■■■□□ 2.83
ABCA2-213	ENST00000466707	KSR2	Q6VAB6	950 aa		32.71	■■■□□ 2.83
ABCA2-213	ENST00000466707	CDC37L1	Q7L3B6	337 aa		32.71	■■■□□ 2.83
ABCA2-213	ENST00000466707	ANKIB1	Q9P2G1	1089 aa		32.71	■■■□□ 2.83
ABCA2-213	ENST00000466707	G2E3	Q7L622	706 aa		32.7	■■■□□ 2.83
ABCA2-213	ENST00000466707	ZC3H12C	Q9C0D7	883 aa	Known RBP	32.7	■■■□□ 2.83
ABCA2-213	ENST00000466707	GGA1	Q9UJY5	639 aa		32.7	■■■□□ 2.83
ABCA2-213	ENST00000466707	RPS12	P25398	132 aa	Known RBP	32.69	■■■□□ 2.82
ABCA2-213	ENST00000466707	USP48	Q86UV5	1035 aa		32.69	■■■□□ 2.82
ABCA2-213	ENST00000466707	CHMP4A	Q9BY43	222 aa		32.69	■■■□□ 2.82
ABCA2-213	ENST00000466707	CTSW	P56202	376 aa		32.68	■■■□□ 2.82
ABCA2-213	ENST00000466707	CWF19L2	Q2TBE0	894 aa	Known RBP	32.68	■■■□□ 2.82
ABCA2-213	ENST00000466707	TWISTNB	Q3B726	338 aa	Predicted RBP	32.68	■■■□□ 2.82
ABCA2-213	ENST00000466707	STK31	Q9BXU1	1019 aa		32.67	■■■□□ 2.82
ABCA2-213	ENST00000466707	VIL1	P09327	827 aa	Known RBP	32.66	■■■□□ 2.82
ABCA2-213	ENST00000466707	ANKRD18A	Q8IVF6	992 aa		32.66	■■■□□ 2.82
ABCA2-213	ENST00000466707	RBM26	Q5T8P6	1007 aa	Known RBP	32.65	■■■□□ 2.82
ABCA2-213	ENST00000466707	WTIP	A6NIX2	430 aa	Predicted RBP	32.64	■■■□□ 2.82
ABCA2-213	ENST00000466707	ZNF646	O15015	1829 aa	Predicted RBP	32.64	■■■□□ 2.82
ABCA2-213	ENST00000466707	XDH	P47989	1333 aa		32.64	■■■□□ 2.82
ABCA2-213	ENST00000466707	TTLL11	Q8NHH1	800 aa		32.64	■■■□□ 2.82
ABCA2-213	ENST00000466707	HHIPL1	Q96JK4	782 aa		32.64	■■■□□ 2.82
ABCA2-213	ENST00000466707	IL16	Q14005	1332 aa		32.63	■■■□□ 2.81
ABCA2-213	ENST00000466707	NEURL1B	A8MQ27	555 aa		32.63	■■■□□ 2.81
ABCA2-213	ENST00000466707	ADM5	C9JUS6	153 aa		32.63	■■■□□ 2.81
ABCA2-213	ENST00000466707	KRT26	Q7Z3Y9	468 aa		32.63	■■■□□ 2.81
ABCA2-213	ENST00000466707	ZNF609	O15014	1411 aa		32.62	■■■□□ 2.81
ABCA2-213	ENST00000466707	MAP2K2	P36507	400 aa		32.62	■■■□□ 2.81
ABCA2-213	ENST00000466707	NEXN	Q0ZGT2	675 aa		32.62	■■■□□ 2.81
ABCA2-213	ENST00000466707	KIF4B	Q2VIQ3	1234 aa		32.62	■■■□□ 2.81
ABCA2-213	ENST00000466707	GREM2	Q9H772	168 aa		32.62	■■■□□ 2.81
ABCA2-213	ENST00000466707	ASTN2	O75129	1339 aa	Predicted RBP	32.61	■■■□□ 2.81
ABCA2-213	ENST00000466707		G3V3G9	751 aa		32.61	■■■□□ 2.81
ABCA2-213	ENST00000466707	SLC4A2	P04920	1241 aa		32.61	■■■□□ 2.81
ABCA2-213	ENST00000466707	DCAF8	Q5TAQ9	597 aa		32.61	■■■□□ 2.81
ABCA2-213	ENST00000466707	TSKS	Q9UJT2	592 aa		32.61	■■■□□ 2.81
ABCA2-213	ENST00000466707	FANCI	Q9NVI1	1328 aa		32.6	■■■□□ 2.81
ABCA2-213	ENST00000466707	CDC5L	Q99459	802 aa	Known RBP	32.6	■■■□□ 2.81
ABCA2-213	ENST00000466707	BEGAIN	Q9BUH8	593 aa		32.6	■■■□□ 2.81
ABCA2-213	ENST00000466707	MRS2	Q9HD23	443 aa		32.6	■■■□□ 2.81
ABCA2-213	ENST00000466707	CACNA1F	O60840	1977 aa		32.59	■■■□□ 2.81
ABCA2-213	ENST00000466707	UBE3B	Q7Z3V4	1068 aa		32.59	■■■□□ 2.81
ABCA2-213	ENST00000466707	GGA3	Q9NZ52	723 aa		32.59	■■■□□ 2.81
ABCA2-213	ENST00000466707	ATP2B4	P23634	1241 aa		32.58	■■■□□ 2.81
ABCA2-213	ENST00000466707	RSBN1L	Q6PCB5	846 aa	Predicted RBP	32.58	■■■□□ 2.81
ABCA2-213	ENST00000466707		H7C1W4	665 aa		32.57	■■■□□ 2.8
ABCA2-213	ENST00000466707	HUNK	P57058	714 aa		32.57	■■■□□ 2.8
ABCA2-213	ENST00000466707	FLII	Q13045	1269 aa		32.57	■■■□□ 2.8
ABCA2-213	ENST00000466707	DCPS	Q96C86	337 aa	Known RBP	32.57	■■■□□ 2.8
ABCA2-213	ENST00000466707	MINPP1	Q9UNW1	487 aa		32.57	■■■□□ 2.8
ABCA2-213	ENST00000466707	NCBP3	Q53F19	620 aa	Known RBP	32.56	■■■□□ 2.8
ABCA2-213	ENST00000466707	ZIC5	Q96T25	663 aa		32.56	■■■□□ 2.8
ABCA2-213	ENST00000466707	GML	Q99445	158 aa		32.56	■■■□□ 2.8
ABCA2-213	ENST00000466707	BSDC1	Q9NW68	430 aa	Predicted RBP	32.56	■■■□□ 2.8
ABCA2-213	ENST00000466707	ZNF280A	P59817	542 aa	Predicted RBP	32.55	■■■□□ 2.8
ABCA2-213	ENST00000466707	AGBL3	Q8NEM8	1001 aa		32.55	■■■□□ 2.8
ABCA2-213	ENST00000466707	SALL2	Q9Y467	1007 aa	Predicted RBP	32.55	■■■□□ 2.8
ABCA2-213	ENST00000466707	MED23	Q9ULK4	1368 aa		32.55	■■■□□ 2.8
ABCA2-213	ENST00000466707	BRPF1	P55201	1214 aa	Predicted RBP	32.54	■■■□□ 2.8
ABCA2-213	ENST00000466707	GBA2	Q9HCG7	927 aa	Predicted RBP	32.54	■■■□□ 2.8
ABCA2-213	ENST00000466707	CASP7	P55210	303 aa		32.53	■■■□□ 2.8
ABCA2-213	ENST00000466707	GCKR	Q14397	625 aa		32.53	■■■□□ 2.8
ABCA2-213	ENST00000466707	USP17L3	A6NCW0	530 aa		32.51	■■■□□ 2.79
ABCA2-213	ENST00000466707	USP17L4	A6NCW7	530 aa		32.51	■■■□□ 2.79
ABCA2-213	ENST00000466707	CCT4	P50991	539 aa	Known RBP	32.51	■■■□□ 2.79
ABCA2-213	ENST00000466707	FKBP5	Q13451	457 aa	Predicted RBP	32.51	■■■□□ 2.79
ABCA2-213	ENST00000466707	USP17L1	Q7RTZ2	530 aa		32.51	■■■□□ 2.79
ABCA2-213	ENST00000466707	PODN	Q7Z5L7	613 aa		32.51	■■■□□ 2.79
ABCA2-213	ENST00000466707	DNAAF4	Q8WXU2	420 aa		32.51	■■■□□ 2.79
ABCA2-213	ENST00000466707	ABHD8	Q96I13	439 aa		32.51	■■■□□ 2.79
ABCA2-213	ENST00000466707	PLA2G12B	Q9BX93	195 aa		32.51	■■■□□ 2.79
ABCA2-213	ENST00000466707	VAMP4	O75379	141 aa		32.5	■■■□□ 2.79
ABCA2-213	ENST00000466707	NOG	Q13253	232 aa		32.5	■■■□□ 2.79
ABCA2-213	ENST00000466707	FAM161A	Q3B820	660 aa		32.5	■■■□□ 2.79
ABCA2-213	ENST00000466707	ANGEL2	Q5VTE6	544 aa	Known RBP	32.5	■■■□□ 2.79

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