RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 IFT57Q9NWB7 429 aa24.4■■□□□ 1.5
SRSF4-202ENST00000466448 ELL2O00472 640 aaPredicted RBP24.39■■□□□ 1.49
SRSF4-202ENST00000466448 APAF1O14727 1248 aa24.39■■□□□ 1.49
SRSF4-202ENST00000466448 CA12O43570 354 aa24.38■■□□□ 1.49
SRSF4-202ENST00000466448 KRT26Q7Z3Y9 468 aa24.38■■□□□ 1.49
SRSF4-202ENST00000466448 MYD88Q99836 296 aa24.38■■□□□ 1.49
SRSF4-202ENST00000466448 PRKRIP1Q9H875 184 aaPredicted RBP24.38■■□□□ 1.49
SRSF4-202ENST00000466448 PODXL2Q9NZ53 605 aa24.38■■□□□ 1.49
SRSF4-202ENST00000466448 HUNKP57058 714 aa24.37■■□□□ 1.49
SRSF4-202ENST00000466448 GNAI1P63096 354 aa24.37■■□□□ 1.49
SRSF4-202ENST00000466448 RBM26Q5T8P6 1007 aaKnown RBP24.36■■□□□ 1.49
SRSF4-202ENST00000466448 ZIC5Q96T25 663 aa24.36■■□□□ 1.49
SRSF4-202ENST00000466448 ZC3H12CQ9C0D7 883 aaKnown RBP24.36■■□□□ 1.49
SRSF4-202ENST00000466448 ANKIB1Q9P2G1 1089 aa24.36■■□□□ 1.49
SRSF4-202ENST00000466448 ADM5C9JUS6 153 aa24.35■■□□□ 1.49
SRSF4-202ENST00000466448 UFL1O94874 794 aa24.35■■□□□ 1.49
SRSF4-202ENST00000466448 PCCAP05165 728 aaPredicted RBP24.35■■□□□ 1.49
SRSF4-202ENST00000466448 HSP90B1P14625 803 aaKnown RBP24.35■■□□□ 1.49
SRSF4-202ENST00000466448 CALD1Q05682 793 aaKnown RBP24.35■■□□□ 1.49
SRSF4-202ENST00000466448 NOGQ13253 232 aa24.35■■□□□ 1.49
SRSF4-202ENST00000466448 C8orf58Q8NAV2 365 aa24.35■■□□□ 1.49
SRSF4-202ENST00000466448 CCDC191Q8NCU4 936 aa24.35■■□□□ 1.49
SRSF4-202ENST00000466448 VIL1P09327 827 aaKnown RBP24.34■■□□□ 1.49
SRSF4-202ENST00000466448 KIF4BQ2VIQ3 1234 aa24.34■■□□□ 1.49
SRSF4-202ENST00000466448 CCDC152Q4G0S7 254 aa24.34■■□□□ 1.49
SRSF4-202ENST00000466448 JARID2Q92833 1246 aaPredicted RBP24.34■■□□□ 1.49
SRSF4-202ENST00000466448 DCPSQ96C86 337 aaKnown RBP24.34■■□□□ 1.49
SRSF4-202ENST00000466448 CCDC85AQ96PX6 553 aaPredicted RBP24.33■■□□□ 1.49
SRSF4-202ENST00000466448 GBA2Q9HCG7 927 aaPredicted RBP24.33■■□□□ 1.49
SRSF4-202ENST00000466448 CWC25Q9NXE8 425 aaPredicted RBP24.33■■□□□ 1.49
SRSF4-202ENST00000466448 GGA1Q9UJY5 639 aa24.33■■□□□ 1.49
SRSF4-202ENST00000466448 CCDC85CA6NKD9 419 aa24.32■■□□□ 1.48
SRSF4-202ENST00000466448 PDE8AO60658 829 aa24.32■■□□□ 1.48
SRSF4-202ENST00000466448 METTL22Q9BUU2 404 aaPredicted RBP24.32■■□□□ 1.48
SRSF4-202ENST00000466448 FAM155AB1AL88 458 aaPredicted RBP24.31■■□□□ 1.48
SRSF4-202ENST00000466448 G3V3G9 751 aa24.31■■□□□ 1.48
SRSF4-202ENST00000466448 DCAF8Q5TAQ9 597 aa24.31■■□□□ 1.48
SRSF4-202ENST00000466448 RGMBQ6NW40 437 aa24.31■■□□□ 1.48
SRSF4-202ENST00000466448 GGA3Q9NZ52 723 aa24.31■■□□□ 1.48
SRSF4-202ENST00000466448 ASTN2O75129 1339 aaPredicted RBP24.31■■□□□ 1.48
SRSF4-202ENST00000466448 DDX58O95786 925 aaKnown RBP24.3■■□□□ 1.48
SRSF4-202ENST00000466448 FAM161AQ3B820 660 aa24.3■■□□□ 1.48
SRSF4-202ENST00000466448 C2orf69Q8N8R5 385 aa24.3■■□□□ 1.48
SRSF4-202ENST00000466448 CCDC30Q5VVM6 783 aa24.29■■□□□ 1.48
SRSF4-202ENST00000466448 XDHP47989 1333 aa24.29■■□□□ 1.48
SRSF4-202ENST00000466448 ZNF609O15014 1411 aa24.28■■□□□ 1.48
SRSF4-202ENST00000466448 ZNF280AP59817 542 aaPredicted RBP24.28■■□□□ 1.48
SRSF4-202ENST00000466448 RSBN1LQ6PCB5 846 aaPredicted RBP24.28■■□□□ 1.48
SRSF4-202ENST00000466448 ANKRD18AQ8IVF6 992 aa24.28■■□□□ 1.48
SRSF4-202ENST00000466448 SULF1Q8IWU6 871 aa24.28■■□□□ 1.48
SRSF4-202ENST00000466448 TSPYL6Q8N831 410 aa24.28■■□□□ 1.48
SRSF4-202ENST00000466448 MCOLN1Q9GZU1 580 aa24.28■■□□□ 1.48
SRSF4-202ENST00000466448 MAP3K2Q9Y2U5 619 aa24.28■■□□□ 1.48
SRSF4-202ENST00000466448 SCN9AQ15858 1988 aa24.28■■□□□ 1.48
SRSF4-202ENST00000466448 AGBL3Q8NEM8 1001 aa24.27■■□□□ 1.48
SRSF4-202ENST00000466448 ZNF157P51786 506 aaPredicted RBP24.26■■□□□ 1.47
SRSF4-202ENST00000466448 CCDC102AQ96A19 550 aa24.26■■□□□ 1.47
SRSF4-202ENST00000466448 WTIPA6NIX2 430 aaPredicted RBP24.25■■□□□ 1.47
SRSF4-202ENST00000466448 IGKV5-2P06315 115 aa24.25■■□□□ 1.47
SRSF4-202ENST00000466448 CTSWP56202 376 aa24.25■■□□□ 1.47
SRSF4-202ENST00000466448 SCARF1Q14162 830 aa24.25■■□□□ 1.47
SRSF4-202ENST00000466448 ANGEL2Q5VTE6 544 aaKnown RBP24.25■■□□□ 1.47
SRSF4-202ENST00000466448 KSR2Q6VAB6 950 aa24.25■■□□□ 1.47
SRSF4-202ENST00000466448 CDCA5Q96FF9 252 aa24.25■■□□□ 1.47
SRSF4-202ENST00000466448 CHMP4AQ9BY43 222 aa24.25■■□□□ 1.47
SRSF4-202ENST00000466448 PI4KAP2A4QPH2 592 aa24.24■■□□□ 1.47
SRSF4-202ENST00000466448 ATP2B4P23634 1241 aa24.24■■□□□ 1.47
SRSF4-202ENST00000466448 KIF23Q02241 960 aaPredicted RBP24.24■■□□□ 1.47
SRSF4-202ENST00000466448 PI4KAP1Q8N8J0 262 aa24.24■■□□□ 1.47
SRSF4-202ENST00000466448 GMLQ99445 158 aa24.24■■□□□ 1.47
SRSF4-202ENST00000466448 USP17L8P0C7I0 530 aa24.23■■□□□ 1.47
SRSF4-202ENST00000466448 RGS19P49795 217 aa24.23■■□□□ 1.47
SRSF4-202ENST00000466448 DGKZQ13574 1117 aa24.23■■□□□ 1.47
SRSF4-202ENST00000466448 TSR2Q969E8 191 aaKnown RBP24.23■■□□□ 1.47
SRSF4-202ENST00000466448 CDC5LQ99459 802 aaKnown RBP24.23■■□□□ 1.47
SRSF4-202ENST00000466448 USP17L3A6NCW0 530 aa24.22■■□□□ 1.47
SRSF4-202ENST00000466448 USP17L4A6NCW7 530 aa24.22■■□□□ 1.47
SRSF4-202ENST00000466448 SLC10A3P09131 477 aa24.22■■□□□ 1.47
SRSF4-202ENST00000466448 USP17L1Q7RTZ2 530 aa24.22■■□□□ 1.47
SRSF4-202ENST00000466448 PODNQ7Z5L7 613 aa24.22■■□□□ 1.47
SRSF4-202ENST00000466448 TTLL11Q8NHH1 800 aa24.22■■□□□ 1.47
SRSF4-202ENST00000466448 MYOZ2Q9NPC6 264 aa24.22■■□□□ 1.47
SRSF4-202ENST00000466448 SAGE1Q9NXZ1 904 aa24.22■■□□□ 1.47
SRSF4-202ENST00000466448 MLLT1Q03111 559 aaPredicted RBP24.21■■□□□ 1.47
SRSF4-202ENST00000466448 CWF19L2Q2TBE0 894 aaKnown RBP24.21■■□□□ 1.47
SRSF4-202ENST00000466448 GREM2Q9H772 168 aa24.21■■□□□ 1.47
SRSF4-202ENST00000466448 MED23Q9ULK4 1368 aa24.2■■□□□ 1.46
SRSF4-202ENST00000466448 NEXNQ0ZGT2 675 aa24.2■■□□□ 1.46
SRSF4-202ENST00000466448 BSDC1Q9NW68 430 aaPredicted RBP24.2■■□□□ 1.46
SRSF4-202ENST00000466448 RNF186Q9NXI6 227 aa24.2■■□□□ 1.46
SRSF4-202ENST00000466448 MINPP1Q9UNW1 487 aa24.2■■□□□ 1.46
SRSF4-202ENST00000466448 STK31Q9BXU1 1019 aa24.19■■□□□ 1.46
SRSF4-202ENST00000466448 PITPNM2Q9BZ72 1349 aa24.18■■□□□ 1.46
SRSF4-202ENST00000466448 NEURL1BA8MQ27 555 aa24.18■■□□□ 1.46
SRSF4-202ENST00000466448 TRPA1O75762 1119 aa24.18■■□□□ 1.46
SRSF4-202ENST00000466448 SCAF8Q9UPN6 1271 aaKnown RBP24.18■■□□□ 1.46
SRSF4-202ENST00000466448 CASP8AP2Q9UKL3 1982 aa24.17■■□□□ 1.46
SRSF4-202ENST00000466448 CCT4P50991 539 aaKnown RBP24.17■■□□□ 1.46
SRSF4-202ENST00000466448 G2E3Q7L622 706 aa24.17■■□□□ 1.46
SRSF4-202ENST00000466448 RASAL3Q86YV0 1011 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms