RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 POLLQ9UGP5 575 aa16.27■□□□□ 0.2
COL5A1-206ENST00000465877 MYH13Q9UKX3 1938 aa16.26■□□□□ 0.19
COL5A1-206ENST00000465877 C6orf229H3BNL8 230 aa16.26■□□□□ 0.19
COL5A1-206ENST00000465877 EIF6P56537 245 aaKnown RBP16.26■□□□□ 0.19
COL5A1-206ENST00000465877 LMBR1LQ6UX01 489 aa16.26■□□□□ 0.19
COL5A1-206ENST00000465877 ARHGAP45Q92619 1136 aa16.26■□□□□ 0.19
COL5A1-206ENST00000465877 KAZALD1Q96I82 304 aa16.26■□□□□ 0.19
COL5A1-206ENST00000465877 L3MBTL3Q96JM7 780 aaPredicted RBP16.26■□□□□ 0.19
COL5A1-206ENST00000465877 GGA1Q9UJY5 639 aa16.26■□□□□ 0.19
COL5A1-206ENST00000465877 TRIM27P14373 513 aa16.25■□□□□ 0.19
COL5A1-206ENST00000465877 IFIT5Q13325 482 aaKnown RBP16.25■□□□□ 0.19
COL5A1-206ENST00000465877 WASHC4Q2M389 1173 aa16.25■□□□□ 0.19
COL5A1-206ENST00000465877 C16orf71Q8IYS4 520 aaPredicted RBP16.25■□□□□ 0.19
COL5A1-206ENST00000465877 GPC2Q8N158 579 aa16.25■□□□□ 0.19
COL5A1-206ENST00000465877 EYA3Q99504 573 aa16.25■□□□□ 0.19
COL5A1-206ENST00000465877 MPHOSPH8Q99549 860 aa16.25■□□□□ 0.19
COL5A1-206ENST00000465877 BICC1Q9H694 974 aaKnown RBP16.25■□□□□ 0.19
COL5A1-206ENST00000465877 CEP350Q5VT06 3117 aa16.25■□□□□ 0.19
COL5A1-206ENST00000465877 MED23Q9ULK4 1368 aa16.25■□□□□ 0.19
COL5A1-206ENST00000465877 POTECB2RU33 542 aa16.24■□□□□ 0.19
COL5A1-206ENST00000465877 TOMM70O94826 608 aa16.24■□□□□ 0.19
COL5A1-206ENST00000465877 VEGFAP15692 232 aaPredicted RBP16.24■□□□□ 0.19
COL5A1-206ENST00000465877 RABL6Q3YEC7 729 aaPredicted RBP16.24■□□□□ 0.19
COL5A1-206ENST00000465877 ATF7IPQ6VMQ6 1270 aa16.24■□□□□ 0.19
COL5A1-206ENST00000465877 FRAT1Q92837 279 aaPredicted RBP16.24■□□□□ 0.19
COL5A1-206ENST00000465877 USP44Q9H0E7 712 aa16.24■□□□□ 0.19
COL5A1-206ENST00000465877 ZNRF3Q9ULT6 936 aa16.24■□□□□ 0.19
COL5A1-206ENST00000465877 RIMBP2O15034 1052 aa16.23■□□□□ 0.19
COL5A1-206ENST00000465877 CCDC57Q2TAC2 916 aa16.23■□□□□ 0.19
COL5A1-206ENST00000465877 ANKRD44Q8N8A2 993 aa16.23■□□□□ 0.19
COL5A1-206ENST00000465877 DBNDD1Q9H9R9 158 aa16.23■□□□□ 0.19
COL5A1-206ENST00000465877 MINPP1Q9UNW1 487 aa16.23■□□□□ 0.19
COL5A1-206ENST00000465877 TNNQ9UQP3 1299 aa16.23■□□□□ 0.19
COL5A1-206ENST00000465877 GJA3Q9Y6H8 435 aa16.23■□□□□ 0.19
COL5A1-206ENST00000465877 IQCA1LA6NCM1 817 aa16.22■□□□□ 0.19
COL5A1-206ENST00000465877 YDJCA8MPS7 323 aa16.22■□□□□ 0.19
COL5A1-206ENST00000465877 IPO8O15397 1037 aaKnown RBP16.22■□□□□ 0.19
COL5A1-206ENST00000465877 ECE2O60344 883 aa16.22■□□□□ 0.19
COL5A1-206ENST00000465877 TAF7LQ5H9L4 462 aa16.22■□□□□ 0.19
COL5A1-206ENST00000465877 RBM46Q8TBY0 533 aaKnown RBP16.22■□□□□ 0.19
COL5A1-206ENST00000465877 UBTFL1P0CB47 393 aaPredicted RBP16.21■□□□□ 0.19
COL5A1-206ENST00000465877 ATP2B4P23634 1241 aa16.21■□□□□ 0.19
COL5A1-206ENST00000465877 CHRNDQ07001 517 aa16.21■□□□□ 0.19
COL5A1-206ENST00000465877 INTS3Q68E01 1043 aaKnown RBP16.21■□□□□ 0.19
COL5A1-206ENST00000465877 ZNF594Q96JF6 807 aaPredicted RBP16.21■□□□□ 0.19
COL5A1-206ENST00000465877 SCNN1DP51172 638 aa16.2■□□□□ 0.18
COL5A1-206ENST00000465877 CXCL9Q07325 125 aa16.2■□□□□ 0.18
COL5A1-206ENST00000465877 ZKSCAN2Q63HK3 967 aa16.2■□□□□ 0.18
COL5A1-206ENST00000465877 CIAPIN1Q6FI81 312 aa16.2■□□□□ 0.18
COL5A1-206ENST00000465877 MEIS3Q99687 375 aa16.2■□□□□ 0.18
COL5A1-206ENST00000465877 ZC3H12CQ9C0D7 883 aaKnown RBP16.2■□□□□ 0.18
COL5A1-206ENST00000465877 ANKRD2Q9GZV1 360 aa16.2■□□□□ 0.18
COL5A1-206ENST00000465877 HACL1Q9UJ83 578 aa16.2■□□□□ 0.18
COL5A1-206ENST00000465877 ZNF609O15014 1411 aa16.19■□□□□ 0.18
COL5A1-206ENST00000465877 RAD17O75943 681 aa16.19■□□□□ 0.18
COL5A1-206ENST00000465877 DOK7Q18PE1 504 aa16.19■□□□□ 0.18
COL5A1-206ENST00000465877 CLUAP1Q96AJ1 413 aa16.19■□□□□ 0.18
COL5A1-206ENST00000465877 TAF1DQ9H5J8 278 aaPredicted RBP16.19■□□□□ 0.18
COL5A1-206ENST00000465877 CNNM1Q9NRU3 951 aa16.19■□□□□ 0.18
COL5A1-206ENST00000465877 ZNF804BA4D1E1 1349 aa16.19■□□□□ 0.18
COL5A1-206ENST00000465877 ECM29Q5VYK3 1845 aa16.18■□□□□ 0.18
COL5A1-206ENST00000465877 WTIPA6NIX2 430 aaPredicted RBP16.18■□□□□ 0.18
COL5A1-206ENST00000465877 LMOD1P29536 600 aaPredicted RBP16.18■□□□□ 0.18
COL5A1-206ENST00000465877 EPHX2P34913 555 aa16.18■□□□□ 0.18
COL5A1-206ENST00000465877 LDHAL6AQ6ZMR3 332 aa16.18■□□□□ 0.18
COL5A1-206ENST00000465877 SMC1BQ8NDV3 1235 aa16.18■□□□□ 0.18
COL5A1-206ENST00000465877 LEMD3Q9Y2U8 911 aa16.18■□□□□ 0.18
COL5A1-206ENST00000465877 LRRFIP2Q9Y608 721 aaKnown RBP16.18■□□□□ 0.18
COL5A1-206ENST00000465877 TRPM7Q96QT4 1865 aa16.17■□□□□ 0.18
COL5A1-206ENST00000465877 POTEIP0CG38 1075 aa16.17■□□□□ 0.18
COL5A1-206ENST00000465877 POTEJP0CG39 1038 aa16.17■□□□□ 0.18
COL5A1-206ENST00000465877 KLRK1P26718 216 aa16.17■□□□□ 0.18
COL5A1-206ENST00000465877 KCNJ4P48050 445 aa16.17■□□□□ 0.18
COL5A1-206ENST00000465877 FSTL1Q12841 308 aa16.17■□□□□ 0.18
COL5A1-206ENST00000465877 TNIP1Q15025 636 aa16.17■□□□□ 0.18
COL5A1-206ENST00000465877 FTSJ3Q8IY81 847 aaKnown RBP16.17■□□□□ 0.18
COL5A1-206ENST00000465877 TMEM57Q8N5G2 664 aa16.17■□□□□ 0.18
COL5A1-206ENST00000465877 G3V3G9 751 aa16.16■□□□□ 0.18
COL5A1-206ENST00000465877 PSMD14O00487 310 aa16.16■□□□□ 0.18
COL5A1-206ENST00000465877 TAF5LO75529 589 aa16.16■□□□□ 0.18
COL5A1-206ENST00000465877 GMPSP49915 693 aaPredicted RBP16.16■□□□□ 0.18
COL5A1-206ENST00000465877 DCAF8Q5TAQ9 597 aa16.16■□□□□ 0.18
COL5A1-206ENST00000465877 GNAI3P08754 354 aa16.15■□□□□ 0.18
COL5A1-206ENST00000465877 EAPPQ56P03 285 aaPredicted RBP16.15■□□□□ 0.18
COL5A1-206ENST00000465877 LDHDQ86WU2 507 aa16.15■□□□□ 0.18
COL5A1-206ENST00000465877 HELBQ8NG08 1087 aaPredicted RBP16.15■□□□□ 0.18
COL5A1-206ENST00000465877 KLHDC4Q8TBB5 520 aa16.15■□□□□ 0.18
COL5A1-206ENST00000465877 PUS3Q9BZE2 481 aaKnown RBP16.15■□□□□ 0.18
COL5A1-206ENST00000465877 GPRC5DQ9NZD1 345 aa16.15■□□□□ 0.18
COL5A1-206ENST00000465877 IRS2Q9Y4H2 1338 aa16.15■□□□□ 0.18
COL5A1-206ENST00000465877 SNAP23O00161 211 aa16.14■□□□□ 0.17
COL5A1-206ENST00000465877 HSPA6P17066 643 aa16.14■□□□□ 0.17
COL5A1-206ENST00000465877 RFX5P48382 616 aaPredicted RBP16.14■□□□□ 0.17
COL5A1-206ENST00000465877 TXNRD3Q86VQ6 643 aa16.14■□□□□ 0.17
COL5A1-206ENST00000465877 DZIP1LQ8IYY4 767 aaKnown RBP16.14■□□□□ 0.17
COL5A1-206ENST00000465877 KCNQ5Q9NR82 932 aa16.14■□□□□ 0.17
COL5A1-206ENST00000465877 HDAC5Q9UQL6 1122 aa16.14■□□□□ 0.17
COL5A1-206ENST00000465877 MROH5Q6ZUA9 1318 aa16.14■□□□□ 0.17
COL5A1-206ENST00000465877 RLBP1P12271 317 aa16.13■□□□□ 0.17
COL5A1-206ENST00000465877 EPS15P42566 896 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms