RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 LRRFIP2Q9Y608 721 aaKnown RBP18.19■□□□□ 0.5
SQSTM1-205ENST00000464493 C6orf229H3BNL8 230 aa18.18■□□□□ 0.5
SQSTM1-205ENST00000464493 PPIP5K2O43314 1243 aa18.18■□□□□ 0.5
SQSTM1-205ENST00000464493 LARGE2Q8N3Y3 721 aa18.18■□□□□ 0.5
SQSTM1-205ENST00000464493 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.18■□□□□ 0.5
SQSTM1-205ENST00000464493 TBC1D16Q8TBP0 767 aa18.18■□□□□ 0.5
SQSTM1-205ENST00000464493 PANK1Q8TE04 598 aa18.18■□□□□ 0.5
SQSTM1-205ENST00000464493 JDP2Q8WYK2 163 aa18.18■□□□□ 0.5
SQSTM1-205ENST00000464493 POLLQ9UGP5 575 aa18.18■□□□□ 0.5
SQSTM1-205ENST00000464493 AOC3Q16853 763 aa18.17■□□□□ 0.5
SQSTM1-205ENST00000464493 LDHAL6AQ6ZMR3 332 aa18.17■□□□□ 0.5
SQSTM1-205ENST00000464493 GGA1Q9UJY5 639 aa18.17■□□□□ 0.5
SQSTM1-205ENST00000464493 XDHP47989 1333 aa18.17■□□□□ 0.5
SQSTM1-205ENST00000464493 TIAM2Q8IVF5 1701 aa18.16■□□□□ 0.5
SQSTM1-205ENST00000464493 GNAI2P04899 355 aa18.16■□□□□ 0.5
SQSTM1-205ENST00000464493 KIAA2012Q0VF49 1180 aa18.16■□□□□ 0.5
SQSTM1-205ENST00000464493 WASHC4Q2M389 1173 aa18.16■□□□□ 0.5
SQSTM1-205ENST00000464493 ZNF526Q8TF50 670 aaPredicted RBP18.16■□□□□ 0.5
SQSTM1-205ENST00000464493 EYA3Q99504 573 aa18.16■□□□□ 0.5
SQSTM1-205ENST00000464493 ANKRD2Q9GZV1 360 aa18.16■□□□□ 0.5
SQSTM1-205ENST00000464493 CNNM1Q9NRU3 951 aa18.16■□□□□ 0.5
SQSTM1-205ENST00000464493 DUOX1Q9NRD9 1551 aa18.16■□□□□ 0.5
SQSTM1-205ENST00000464493 LTBP1Q14766 1721 aa18.15■□□□□ 0.5
SQSTM1-205ENST00000464493 ZBTB7BO15156 539 aaPredicted RBP18.15■□□□□ 0.5
SQSTM1-205ENST00000464493 UFL1O94874 794 aa18.15■□□□□ 0.5
SQSTM1-205ENST00000464493 ATP2B4P23634 1241 aa18.15■□□□□ 0.5
SQSTM1-205ENST00000464493 CHRNDQ07001 517 aa18.15■□□□□ 0.5
SQSTM1-205ENST00000464493 DPY19L2Q6NUT2 758 aa18.15■□□□□ 0.5
SQSTM1-205ENST00000464493 GLTPD2A6NH11 291 aa18.14■□□□□ 0.49
SQSTM1-205ENST00000464493 FZD9O00144 591 aa18.14■□□□□ 0.49
SQSTM1-205ENST00000464493 RIMBP2O15034 1052 aa18.14■□□□□ 0.49
SQSTM1-205ENST00000464493 NIM1KQ8IY84 436 aa18.14■□□□□ 0.49
SQSTM1-205ENST00000464493 ZC3H12CQ9C0D7 883 aaKnown RBP18.14■□□□□ 0.49
SQSTM1-205ENST00000464493 RFX5P48382 616 aaPredicted RBP18.13■□□□□ 0.49
SQSTM1-205ENST00000464493 PDE3AQ14432 1141 aa18.13■□□□□ 0.49
SQSTM1-205ENST00000464493 GPR101Q96P66 508 aaPredicted RBP18.13■□□□□ 0.49
SQSTM1-205ENST00000464493 PUS3Q9BZE2 481 aaKnown RBP18.13■□□□□ 0.49
SQSTM1-205ENST00000464493 GPBP1L1Q9HC44 474 aaPredicted RBP18.13■□□□□ 0.49
SQSTM1-205ENST00000464493 LEMD3Q9Y2U8 911 aa18.13■□□□□ 0.49
SQSTM1-205ENST00000464493 KDM2BQ8NHM5 1336 aa18.13■□□□□ 0.49
SQSTM1-205ENST00000464493 COL4A5P29400 1685 aa18.12■□□□□ 0.49
SQSTM1-205ENST00000464493 WTIPA6NIX2 430 aaPredicted RBP18.12■□□□□ 0.49
SQSTM1-205ENST00000464493 MVPQ14764 893 aaKnown RBP18.12■□□□□ 0.49
SQSTM1-205ENST00000464493 HELBQ8NG08 1087 aaPredicted RBP18.12■□□□□ 0.49
SQSTM1-205ENST00000464493 KLHDC4Q8TBB5 520 aa18.12■□□□□ 0.49
SQSTM1-205ENST00000464493 COG6Q9Y2V7 657 aa18.12■□□□□ 0.49
SQSTM1-205ENST00000464493 RIPOR2Q9Y4F9 1068 aa18.12■□□□□ 0.49
SQSTM1-205ENST00000464493 TAF5LO75529 589 aa18.11■□□□□ 0.49
SQSTM1-205ENST00000464493 EIF6P56537 245 aaKnown RBP18.11■□□□□ 0.49
SQSTM1-205ENST00000464493 PTPN12Q05209 780 aaKnown RBP18.11■□□□□ 0.49
SQSTM1-205ENST00000464493 ZNRF3Q9ULT6 936 aa18.11■□□□□ 0.49
SQSTM1-205ENST00000464493 ZNF804BA4D1E1 1349 aa18.11■□□□□ 0.49
SQSTM1-205ENST00000464493 MROH5Q6ZUA9 1318 aa18.1■□□□□ 0.49
SQSTM1-205ENST00000464493 SRGAP3O43295 1099 aa18.1■□□□□ 0.49
SQSTM1-205ENST00000464493 DDNO94850 711 aaPredicted RBP18.1■□□□□ 0.49
SQSTM1-205ENST00000464493 KCNJ4P48050 445 aa18.1■□□□□ 0.49
SQSTM1-205ENST00000464493 MTX1Q13505 466 aa18.1■□□□□ 0.49
SQSTM1-205ENST00000464493 LRRC24Q50LG9 513 aa18.1■□□□□ 0.49
SQSTM1-205ENST00000464493 C20orf194Q5TEA3 1177 aa18.1■□□□□ 0.49
SQSTM1-205ENST00000464493 DDX19BQ9UMR2 479 aa18.1■□□□□ 0.49
SQSTM1-205ENST00000464493 ZNF541Q9H0D2 1346 aa18.09■□□□□ 0.49
SQSTM1-205ENST00000464493 G3V3G9 751 aa18.09■□□□□ 0.49
SQSTM1-205ENST00000464493 DOK7Q18PE1 504 aa18.09■□□□□ 0.49
SQSTM1-205ENST00000464493 DCAF8Q5TAQ9 597 aa18.09■□□□□ 0.49
SQSTM1-205ENST00000464493 C1orf115Q9H7X2 142 aa18.09■□□□□ 0.49
SQSTM1-205ENST00000464493 DBNDD1Q9H9R9 158 aa18.09■□□□□ 0.49
SQSTM1-205ENST00000464493 MED23Q9ULK4 1368 aa18.08■□□□□ 0.49
SQSTM1-205ENST00000464493 EYA2O00167 538 aa18.08■□□□□ 0.48
SQSTM1-205ENST00000464493 CHMP4BQ9H444 224 aaKnown RBP18.08■□□□□ 0.48
SQSTM1-205ENST00000464493 RRAGCQ9HB90 399 aa18.08■□□□□ 0.48
SQSTM1-205ENST00000464493 COPRSQ9NQ92 184 aa18.08■□□□□ 0.48
SQSTM1-205ENST00000464493 FBXO3Q9UK99 471 aa18.08■□□□□ 0.48
SQSTM1-205ENST00000464493 YDJCA8MPS7 323 aa18.07■□□□□ 0.48
SQSTM1-205ENST00000464493 SNAP23O00161 211 aa18.07■□□□□ 0.48
SQSTM1-205ENST00000464493 ECE2O60344 883 aa18.07■□□□□ 0.48
SQSTM1-205ENST00000464493 RRP1P56182 461 aaKnown RBP18.07■□□□□ 0.48
SQSTM1-205ENST00000464493 ATP8B2P98198 1209 aa18.07■□□□□ 0.48
SQSTM1-205ENST00000464493 CXCL9Q07325 125 aa18.07■□□□□ 0.48
SQSTM1-205ENST00000464493 METTL24Q5JXM2 366 aa18.07■□□□□ 0.48
SQSTM1-205ENST00000464493 GPC2Q8N158 579 aa18.07■□□□□ 0.48
SQSTM1-205ENST00000464493 SIL1Q9H173 461 aa18.07■□□□□ 0.48
SQSTM1-205ENST00000464493 NMRK2Q9NPI5 230 aa18.07■□□□□ 0.48
SQSTM1-205ENST00000464493 PA2G4Q9UQ80 394 aaKnown RBP18.07■□□□□ 0.48
SQSTM1-205ENST00000464493 GJA3Q9Y6H8 435 aa18.07■□□□□ 0.48
SQSTM1-205ENST00000464493 A0A1B0GUL6 1792 aa18.07■□□□□ 0.48
SQSTM1-205ENST00000464493 PNMA6EA0A0J9YXQ4 647 aa18.06■□□□□ 0.48
SQSTM1-205ENST00000464493 CIAO1O76071 339 aa18.06■□□□□ 0.48
SQSTM1-205ENST00000464493 UBE4AQ14139 1066 aa18.06■□□□□ 0.48
SQSTM1-205ENST00000464493 TXNRD3Q86VQ6 643 aa18.06■□□□□ 0.48
SQSTM1-205ENST00000464493 RAD17O75943 681 aa18.05■□□□□ 0.48
SQSTM1-205ENST00000464493 PDE8BO95263 885 aa18.05■□□□□ 0.48
SQSTM1-205ENST00000464493 VEGFAP15692 232 aaPredicted RBP18.05■□□□□ 0.48
SQSTM1-205ENST00000464493 KLRK1P26718 216 aa18.05■□□□□ 0.48
SQSTM1-205ENST00000464493 TNIP1Q15025 636 aa18.05■□□□□ 0.48
SQSTM1-205ENST00000464493 CIAPIN1Q6FI81 312 aa18.05■□□□□ 0.48
SQSTM1-205ENST00000464493 ATG9AQ7Z3C6 839 aa18.05■□□□□ 0.48
SQSTM1-205ENST00000464493 VGLL2Q8N8G2 317 aa18.05■□□□□ 0.48
SQSTM1-205ENST00000464493 ZBTB40Q9NUA8 1239 aa18.05■□□□□ 0.48
SQSTM1-205ENST00000464493 WDR90Q96KV7 1748 aa18.04■□□□□ 0.48
SQSTM1-205ENST00000464493 POTECB2RU33 542 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms