RNA–Protein interactions for RNA: ENST00000461539.5

C9orf78-203, Transcript of chromosome 9 open reading frame 78, humanhuman

TSL 5

Gene C9orf78, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-203ENST00000461539 TMC4Q7Z404 712 aa12.06□□□□□ -0.48
C9orf78-203ENST00000461539 NLGN2Q8NFZ4 835 aa12.06□□□□□ -0.48
C9orf78-203ENST00000461539 HELBQ8NG08 1087 aaPredicted RBP12.06□□□□□ -0.48
C9orf78-203ENST00000461539 IL1RAPL2Q9NP60 686 aa12.06□□□□□ -0.48
C9orf78-203ENST00000461539 PIM2Q9P1W9 311 aa12.06□□□□□ -0.48
C9orf78-203ENST00000461539 ZNF219Q9P2Y4 722 aaPredicted RBP12.06□□□□□ -0.48
C9orf78-203ENST00000461539 MINPP1Q9UNW1 487 aa12.06□□□□□ -0.48
C9orf78-203ENST00000461539 MROH5Q6ZUA9 1318 aa12.06□□□□□ -0.48
C9orf78-203ENST00000461539 ANKRD36CQ5JPF3 1778 aa12.05□□□□□ -0.48
C9orf78-203ENST00000461539 SASH1O94885 1247 aa12.05□□□□□ -0.48
C9orf78-203ENST00000461539 KCNA3P22001 575 aa12.05□□□□□ -0.48
C9orf78-203ENST00000461539 LNPKQ9C0E8 428 aa12.05□□□□□ -0.48
C9orf78-203ENST00000461539 ANKRD2Q9GZV1 360 aa12.05□□□□□ -0.48
C9orf78-203ENST00000461539 TAF5LO75529 589 aa12.04□□□□□ -0.48
C9orf78-203ENST00000461539 NUCB1Q02818 461 aa12.04□□□□□ -0.48
C9orf78-203ENST00000461539 DALRD3Q5D0E6 543 aaKnown RBP12.04□□□□□ -0.48
C9orf78-203ENST00000461539 SLC51AQ86UW1 340 aa12.04□□□□□ -0.48
C9orf78-203ENST00000461539 CHD1LQ86WJ1 897 aa12.04□□□□□ -0.48
C9orf78-203ENST00000461539 SP8Q8IXZ3 490 aa12.04□□□□□ -0.48
C9orf78-203ENST00000461539 CLASRPQ8N2M8 674 aaKnown RBP12.04□□□□□ -0.48
C9orf78-203ENST00000461539 ANKIB1Q9P2G1 1089 aa12.04□□□□□ -0.48
C9orf78-203ENST00000461539 ATP6V0A2Q9Y487 856 aa12.04□□□□□ -0.48
C9orf78-203ENST00000461539 N4BP2Q86UW6 1770 aaPredicted RBP12.04□□□□□ -0.48
C9orf78-203ENST00000461539 PDE8BO95263 885 aa12.03□□□□□ -0.48
C9orf78-203ENST00000461539 KCNJ4P48050 445 aa12.03□□□□□ -0.48
C9orf78-203ENST00000461539 OLFM4Q6UX06 510 aa12.03□□□□□ -0.48
C9orf78-203ENST00000461539 AACSQ86V21 672 aa12.03□□□□□ -0.48
C9orf78-203ENST00000461539 SYT17Q9BSW7 474 aa12.03□□□□□ -0.48
C9orf78-203ENST00000461539 NSFL1CQ9UNZ2 370 aaKnown RBP12.03□□□□□ -0.48
C9orf78-203ENST00000461539 BCS1LQ9Y276 419 aa12.03□□□□□ -0.48
C9orf78-203ENST00000461539 AKAP2Q9Y2D5 859 aa12.03□□□□□ -0.48
C9orf78-203ENST00000461539 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.03□□□□□ -0.48
C9orf78-203ENST00000461539 AFDNP55196 1824 aaKnown RBP12.02□□□□□ -0.48
C9orf78-203ENST00000461539 C21orf2O43822 256 aa12.02□□□□□ -0.49
C9orf78-203ENST00000461539 IFIT2P09913 472 aaKnown RBP12.02□□□□□ -0.49
C9orf78-203ENST00000461539 GPSM2P81274 684 aa12.02□□□□□ -0.49
C9orf78-203ENST00000461539 PUM3Q15397 648 aaKnown RBP12.02□□□□□ -0.49
C9orf78-203ENST00000461539 ATP2B3Q16720 1220 aa12.02□□□□□ -0.49
C9orf78-203ENST00000461539 TNNI3KQ59H18 835 aa12.02□□□□□ -0.49
C9orf78-203ENST00000461539 CC2D2BQ6DHV5 1058 aa12.02□□□□□ -0.49
C9orf78-203ENST00000461539 VGLL2Q8N8G2 317 aa12.02□□□□□ -0.49
C9orf78-203ENST00000461539 NEUROD6Q96NK8 337 aa12.02□□□□□ -0.49
C9orf78-203ENST00000461539 GPR108Q9NPR9 543 aa12.02□□□□□ -0.49
C9orf78-203ENST00000461539 FPGT-TNNI3KV9GXZ4 949 aa12.02□□□□□ -0.49
C9orf78-203ENST00000461539 TNRC6CQ9HCJ0 1690 aaKnown RBP12.02□□□□□ -0.49
C9orf78-203ENST00000461539 XDHP47989 1333 aa12.02□□□□□ -0.49
C9orf78-203ENST00000461539 NRXN2Q9P2S2 1712 aa12.02□□□□□ -0.49
C9orf78-203ENST00000461539 A0A1B0GUL7 405 aa12.01□□□□□ -0.49
C9orf78-203ENST00000461539 SNAP23O00161 211 aa12.01□□□□□ -0.49
C9orf78-203ENST00000461539 UFL1O94874 794 aa12.01□□□□□ -0.49
C9orf78-203ENST00000461539 SLC5A1P13866 664 aa12.01□□□□□ -0.49
C9orf78-203ENST00000461539 ATP2B4P23634 1241 aa12.01□□□□□ -0.49
C9orf78-203ENST00000461539 TIMM10P62072 90 aa12.01□□□□□ -0.49
C9orf78-203ENST00000461539 DPP8Q6V1X1 898 aaPredicted RBP12.01□□□□□ -0.49
C9orf78-203ENST00000461539 C16orf71Q8IYS4 520 aaPredicted RBP12.01□□□□□ -0.49
C9orf78-203ENST00000461539 MPNDQ8N594 471 aa12.01□□□□□ -0.49
C9orf78-203ENST00000461539 C7orf43Q8WVR3 580 aa12.01□□□□□ -0.49
C9orf78-203ENST00000461539 LPIN2Q92539 896 aa12.01□□□□□ -0.49
C9orf78-203ENST00000461539 EAF2Q96CJ1 260 aaPredicted RBP12.01□□□□□ -0.49
C9orf78-203ENST00000461539 CCDC8Q9H0W5 538 aaPredicted RBP12.01□□□□□ -0.49
C9orf78-203ENST00000461539 GGA1Q9UJY5 639 aa12.01□□□□□ -0.49
C9orf78-203ENST00000461539 C6orf229H3BNL8 230 aa12□□□□□ -0.49
C9orf78-203ENST00000461539 IFIT1P09914 478 aaKnown RBP12□□□□□ -0.49
C9orf78-203ENST00000461539 UBE4AQ14139 1066 aa12□□□□□ -0.49
C9orf78-203ENST00000461539 CCDC93Q567U6 631 aa12□□□□□ -0.49
C9orf78-203ENST00000461539 GORABQ5T7V8 394 aa12□□□□□ -0.49
C9orf78-203ENST00000461539 SOGA3Q5TF21 947 aa12□□□□□ -0.49
C9orf78-203ENST00000461539 LEMD3Q9Y2U8 911 aa12□□□□□ -0.49
C9orf78-203ENST00000461539 ZNF804BA4D1E1 1349 aa12□□□□□ -0.49
C9orf78-203ENST00000461539 WTIPA6NIX2 430 aaPredicted RBP11.99□□□□□ -0.49
C9orf78-203ENST00000461539 FGFR2P21802 821 aa11.99□□□□□ -0.49
C9orf78-203ENST00000461539 ADORA1P30542 326 aa11.99□□□□□ -0.49
C9orf78-203ENST00000461539 SKAP1Q86WV1 359 aa11.99□□□□□ -0.49
C9orf78-203ENST00000461539 PELP1Q8IZL8 1130 aaKnown RBP11.99□□□□□ -0.49
C9orf78-203ENST00000461539 TBC1D16Q8TBP0 767 aa11.99□□□□□ -0.49
C9orf78-203ENST00000461539 OTUD7AQ8TE49 926 aaPredicted RBP11.99□□□□□ -0.49
C9orf78-203ENST00000461539 XAGE2Q96GT9 111 aa11.99□□□□□ -0.49
C9orf78-203ENST00000461539 DBNDD2Q9BQY9 259 aa11.99□□□□□ -0.49
C9orf78-203ENST00000461539 TLR7Q9NYK1 1049 aaKnown RBP11.99□□□□□ -0.49
C9orf78-203ENST00000461539 PODXL2Q9NZ53 605 aa11.99□□□□□ -0.49
C9orf78-203ENST00000461539 DDX60Q8IY21 1712 aaKnown RBP11.98□□□□□ -0.49
C9orf78-203ENST00000461539 COL4A1P02462 1669 aa11.98□□□□□ -0.49
C9orf78-203ENST00000461539 PDE4AP27815 886 aa11.98□□□□□ -0.49
C9orf78-203ENST00000461539 RGS3P49796 1198 aa11.98□□□□□ -0.49
C9orf78-203ENST00000461539 GRIPAP1Q4V328 841 aa11.98□□□□□ -0.49
C9orf78-203ENST00000461539 RTKN2Q8IZC4 609 aa11.98□□□□□ -0.49
C9orf78-203ENST00000461539 GPATCH3Q96I76 525 aa11.98□□□□□ -0.49
C9orf78-203ENST00000461539 GPR101Q96P66 508 aaPredicted RBP11.98□□□□□ -0.49
C9orf78-203ENST00000461539 POLLQ9UGP5 575 aa11.98□□□□□ -0.49
C9orf78-203ENST00000461539 DBNLQ9UJU6 430 aaKnown RBP11.98□□□□□ -0.49
C9orf78-203ENST00000461539 LRP5O75197 1615 aa11.97□□□□□ -0.49
C9orf78-203ENST00000461539 MX1P20591 662 aa11.97□□□□□ -0.49
C9orf78-203ENST00000461539 KLRK1P26718 216 aa11.97□□□□□ -0.49
C9orf78-203ENST00000461539 CAVIN4Q5BKX8 364 aa11.97□□□□□ -0.49
C9orf78-203ENST00000461539 VPS37DQ86XT2 251 aa11.97□□□□□ -0.49
C9orf78-203ENST00000461539 EYA3Q99504 573 aa11.97□□□□□ -0.49
C9orf78-203ENST00000461539 ZNF609O15014 1411 aa11.96□□□□□ -0.49
C9orf78-203ENST00000461539 RIMBP2O15034 1052 aa11.96□□□□□ -0.49
C9orf78-203ENST00000461539 GYG1P46976 350 aa11.96□□□□□ -0.49
C9orf78-203ENST00000461539 CCDC158Q5M9N0 1113 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms