RNA–Protein interactions for RNA: ENST00000460194.1

SRRT-206, Transcript of serrate, RNA effector molecule, humanhuman

TSL 2

Gene SRRT, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-206ENST00000460194 RTL5Q5HYW3 569 aaPredicted RBP17.21■□□□□ 0.35
SRRT-206ENST00000460194 ZNF408Q9H9D4 720 aa17.21■□□□□ 0.35
SRRT-206ENST00000460194 AKAP11Q9UKA4 1901 aa17.2■□□□□ 0.34
SRRT-206ENST00000460194 RIMBP2O15034 1052 aa17.2■□□□□ 0.34
SRRT-206ENST00000460194 NOGQ13253 232 aa17.2■□□□□ 0.34
SRRT-206ENST00000460194 TBC1D10BQ4KMP7 808 aaPredicted RBP17.2■□□□□ 0.34
SRRT-206ENST00000460194 ZBTB38Q8NAP3 1195 aaPredicted RBP17.2■□□□□ 0.34
SRRT-206ENST00000460194 PHAXQ9H814 394 aaKnown RBP17.2■□□□□ 0.34
SRRT-206ENST00000460194 SEC31BQ9NQW1 1179 aa17.2■□□□□ 0.34
SRRT-206ENST00000460194 HUNKP57058 714 aa17.19■□□□□ 0.34
SRRT-206ENST00000460194 DOK7Q18PE1 504 aa17.19■□□□□ 0.34
SRRT-206ENST00000460194 MCOLN1Q9GZU1 580 aa17.19■□□□□ 0.34
SRRT-206ENST00000460194 MYH3P11055 1940 aa17.18■□□□□ 0.34
SRRT-206ENST00000460194 ADM5C9JUS6 153 aa17.18■□□□□ 0.34
SRRT-206ENST00000460194 C6orf229H3BNL8 230 aa17.18■□□□□ 0.34
SRRT-206ENST00000460194 DDX10Q13206 875 aaKnown RBP17.18■□□□□ 0.34
SRRT-206ENST00000460194 RGMBQ6NW40 437 aa17.18■□□□□ 0.34
SRRT-206ENST00000460194 KRT26Q7Z3Y9 468 aa17.18■□□□□ 0.34
SRRT-206ENST00000460194 EYA3Q99504 573 aa17.18■□□□□ 0.34
SRRT-206ENST00000460194 ASTN2O75129 1339 aaPredicted RBP17.18■□□□□ 0.34
SRRT-206ENST00000460194 CCDC85CA6NKD9 419 aa17.17■□□□□ 0.34
SRRT-206ENST00000460194 GMLQ99445 158 aa17.17■□□□□ 0.34
SRRT-206ENST00000460194 GBA2Q9HCG7 927 aaPredicted RBP17.17■□□□□ 0.34
SRRT-206ENST00000460194 PCCAP05165 728 aaPredicted RBP17.16■□□□□ 0.34
SRRT-206ENST00000460194 ZNF280AP59817 542 aaPredicted RBP17.16■□□□□ 0.34
SRRT-206ENST00000460194 SLC34A2O95436 690 aa17.15■□□□□ 0.34
SRRT-206ENST00000460194 MLLT1Q03111 559 aaPredicted RBP17.15■□□□□ 0.34
SRRT-206ENST00000460194 WDR43Q15061 677 aaKnown RBP eCLIP17.15■□□□□ 0.34
SRRT-206ENST00000460194 KIF4BQ2VIQ3 1234 aa17.15■□□□□ 0.34
SRRT-206ENST00000460194 RIC3Q7Z5B4 369 aa17.15■□□□□ 0.34
SRRT-206ENST00000460194 CCDC191Q8NCU4 936 aa17.15■□□□□ 0.34
SRRT-206ENST00000460194 ZC3H12CQ9C0D7 883 aaKnown RBP17.15■□□□□ 0.34
SRRT-206ENST00000460194 IFT57Q9NWB7 429 aa17.15■□□□□ 0.34
SRRT-206ENST00000460194 SPEF2Q9C093 1822 aa17.14■□□□□ 0.34
SRRT-206ENST00000460194 WTIPA6NIX2 430 aaPredicted RBP17.14■□□□□ 0.33
SRRT-206ENST00000460194 RBM26Q5T8P6 1007 aaKnown RBP17.14■□□□□ 0.33
SRRT-206ENST00000460194 C8orf58Q8NAV2 365 aa17.14■□□□□ 0.33
SRRT-206ENST00000460194 DCPSQ96C86 337 aaKnown RBP17.14■□□□□ 0.33
SRRT-206ENST00000460194 MYD88Q99836 296 aa17.14■□□□□ 0.33
SRRT-206ENST00000460194 SAGE1Q9NXZ1 904 aa17.14■□□□□ 0.33
SRRT-206ENST00000460194 PDE8AO60658 829 aa17.13■□□□□ 0.33
SRRT-206ENST00000460194 SLC10A3P09131 477 aa17.13■□□□□ 0.33
SRRT-206ENST00000460194 KIF23Q02241 960 aaPredicted RBP17.13■□□□□ 0.33
SRRT-206ENST00000460194 C2orf69Q8N8R5 385 aa17.13■□□□□ 0.33
SRRT-206ENST00000460194 AGBL3Q8NEM8 1001 aa17.13■□□□□ 0.33
SRRT-206ENST00000460194 JARID2Q92833 1246 aaPredicted RBP17.13■□□□□ 0.33
SRRT-206ENST00000460194 CCDC102AQ96A19 550 aa17.13■□□□□ 0.33
SRRT-206ENST00000460194 METTL22Q9BUU2 404 aaPredicted RBP17.13■□□□□ 0.33
SRRT-206ENST00000460194 GGA3Q9NZ52 723 aa17.13■□□□□ 0.33
SRRT-206ENST00000460194 ELL2O00472 640 aaPredicted RBP17.12■□□□□ 0.33
SRRT-206ENST00000460194 APAF1O14727 1248 aa17.12■□□□□ 0.33
SRRT-206ENST00000460194 UFL1O94874 794 aa17.12■□□□□ 0.33
SRRT-206ENST00000460194 GOLGA2Q08379 1002 aa17.12■□□□□ 0.33
SRRT-206ENST00000460194 DGKZQ13574 1117 aa17.12■□□□□ 0.33
SRRT-206ENST00000460194 RSBN1LQ6PCB5 846 aaPredicted RBP17.12■□□□□ 0.33
SRRT-206ENST00000460194 CDCA5Q96FF9 252 aa17.12■□□□□ 0.33
SRRT-206ENST00000460194 CSRNP1Q96S65 589 aa17.12■□□□□ 0.33
SRRT-206ENST00000460194 PRKRIP1Q9H875 184 aaPredicted RBP17.12■□□□□ 0.33
SRRT-206ENST00000460194 RNF186Q9NXI6 227 aa17.12■□□□□ 0.33
SRRT-206ENST00000460194 GGA1Q9UJY5 639 aa17.12■□□□□ 0.33
SRRT-206ENST00000460194 PAPPA2Q9BXP8 1791 aa17.11■□□□□ 0.33
SRRT-206ENST00000460194 GNAI1P63096 354 aa17.11■□□□□ 0.33
SRRT-206ENST00000460194 CCDC152Q4G0S7 254 aa17.11■□□□□ 0.33
SRRT-206ENST00000460194 ANKIB1Q9P2G1 1089 aa17.11■□□□□ 0.33
SRRT-206ENST00000460194 IGKV5-2P06315 115 aa17.1■□□□□ 0.33
SRRT-206ENST00000460194 HSP90B1P14625 803 aaKnown RBP17.1■□□□□ 0.33
SRRT-206ENST00000460194 ZNF157P51786 506 aaPredicted RBP17.1■□□□□ 0.33
SRRT-206ENST00000460194 SCARF1Q14162 830 aa17.1■□□□□ 0.33
SRRT-206ENST00000460194 ANGEL2Q5VTE6 544 aaKnown RBP17.1■□□□□ 0.33
SRRT-206ENST00000460194 TSPYL6Q8N831 410 aa17.1■□□□□ 0.33
SRRT-206ENST00000460194 CWC25Q9NXE8 425 aaPredicted RBP17.1■□□□□ 0.33
SRRT-206ENST00000460194 XDHP47989 1333 aa17.1■□□□□ 0.33
SRRT-206ENST00000460194 PODNQ7Z5L7 613 aa17.09■□□□□ 0.33
SRRT-206ENST00000460194 SULF1Q8IWU6 871 aa17.09■□□□□ 0.33
SRRT-206ENST00000460194 TTLL11Q8NHH1 800 aa17.09■□□□□ 0.33
SRRT-206ENST00000460194 CCDC85AQ96PX6 553 aaPredicted RBP17.09■□□□□ 0.33
SRRT-206ENST00000460194 PITPNM2Q9BZ72 1349 aa17.09■□□□□ 0.33
SRRT-206ENST00000460194 PDE4DIPQ5VU43 2346 aa17.09■□□□□ 0.33
SRRT-206ENST00000460194 RASAL3Q86YV0 1011 aa17.08■□□□□ 0.32
SRRT-206ENST00000460194 MYOZ2Q9NPC6 264 aa17.08■□□□□ 0.32
SRRT-206ENST00000460194 MINPP1Q9UNW1 487 aa17.08■□□□□ 0.32
SRRT-206ENST00000460194 TRPA1O75762 1119 aa17.07■□□□□ 0.32
SRRT-206ENST00000460194 USP17L8P0C7I0 530 aa17.07■□□□□ 0.32
SRRT-206ENST00000460194 ATP2B4P23634 1241 aa17.07■□□□□ 0.32
SRRT-206ENST00000460194 FKBP1BP68106 108 aa17.07■□□□□ 0.32
SRRT-206ENST00000460194 KSR2Q6VAB6 950 aa17.07■□□□□ 0.32
SRRT-206ENST00000460194 ANKRD18AQ8IVF6 992 aa17.07■□□□□ 0.32
SRRT-206ENST00000460194 MAP3K2Q9Y2U5 619 aa17.07■□□□□ 0.32
SRRT-206ENST00000460194 CACNA1FO60840 1977 aa17.06■□□□□ 0.32
SRRT-206ENST00000460194 MED23Q9ULK4 1368 aa17.06■□□□□ 0.32
SRRT-206ENST00000460194 PI4KAP2A4QPH2 592 aa17.06■□□□□ 0.32
SRRT-206ENST00000460194 USP17L3A6NCW0 530 aa17.06■□□□□ 0.32
SRRT-206ENST00000460194 USP17L4A6NCW7 530 aa17.06■□□□□ 0.32
SRRT-206ENST00000460194 CTSWP56202 376 aa17.06■□□□□ 0.32
SRRT-206ENST00000460194 DACT2Q5SW24 774 aa17.06■□□□□ 0.32
SRRT-206ENST00000460194 CCDC30Q5VVM6 783 aa17.06■□□□□ 0.32
SRRT-206ENST00000460194 USP17L1Q7RTZ2 530 aa17.06■□□□□ 0.32
SRRT-206ENST00000460194 TXNRD3Q86VQ6 643 aa17.06■□□□□ 0.32
SRRT-206ENST00000460194 PI4KAP1Q8N8J0 262 aa17.06■□□□□ 0.32
SRRT-206ENST00000460194 BSDC1Q9NW68 430 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms