RNA–Protein interactions for RNA: ENST00000455343.5

RBM39-220, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 441 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-220ENST00000455343 USP17L5A8MUK1 530 aa5.79□□□□□ -1.48
RBM39-220ENST00000455343 PPP1R15AO75807 674 aaPredicted RBP5.79□□□□□ -1.48
RBM39-220ENST00000455343 SNRPNP63162 240 aaKnown RBP5.79□□□□□ -1.48
RBM39-220ENST00000455343 GALNT6Q8NCL4 622 aa5.79□□□□□ -1.48
RBM39-220ENST00000455343 EDARADDQ8WWZ3 215 aa5.79□□□□□ -1.48
RBM39-220ENST00000455343 AIDAQ96BJ3 306 aa5.79□□□□□ -1.48
RBM39-220ENST00000455343 KRTAP4-6Q9BYQ5 205 aa5.79□□□□□ -1.48
RBM39-220ENST00000455343 ZDHHC3Q9NYG2 299 aa5.79□□□□□ -1.48
RBM39-220ENST00000455343 PCDHGC4Q9Y5F7 938 aa5.79□□□□□ -1.48
RBM39-220ENST00000455343 DAPK1P53355 1430 aa5.79□□□□□ -1.48
RBM39-220ENST00000455343 MST1RQ04912 1400 aa5.79□□□□□ -1.48
RBM39-220ENST00000455343 ANKRD30AQ9BXX3 1397 aa5.79□□□□□ -1.48
RBM39-220ENST00000455343 A0A1W2PNR3 127 aa5.78□□□□□ -1.48
RBM39-220ENST00000455343 BACH1O14867 736 aa5.78□□□□□ -1.48
RBM39-220ENST00000455343 ATXN7O15265 892 aaPredicted RBP5.78□□□□□ -1.48
RBM39-220ENST00000455343 RAD21O60216 631 aa5.78□□□□□ -1.48
RBM39-220ENST00000455343 ITGB2P05107 769 aa5.78□□□□□ -1.48
RBM39-220ENST00000455343 ARAFP10398 606 aa5.78□□□□□ -1.48
RBM39-220ENST00000455343 TATP17735 454 aaPredicted RBP5.78□□□□□ -1.48
RBM39-220ENST00000455343 FLIIQ13045 1269 aa5.78□□□□□ -1.48
RBM39-220ENST00000455343 PLA2G4EQ3MJ16 856 aa5.78□□□□□ -1.48
RBM39-220ENST00000455343 VPS8Q8N3P4 1428 aa5.78□□□□□ -1.48
RBM39-220ENST00000455343 ADAMTS19Q8TE59 1207 aa5.78□□□□□ -1.48
RBM39-220ENST00000455343 ZNF358Q9NW07 568 aa5.78□□□□□ -1.48
RBM39-220ENST00000455343 CABP1Q9NZU7 370 aa5.78□□□□□ -1.48
RBM39-220ENST00000455343 GGA1Q9UJY5 639 aa5.78□□□□□ -1.48
RBM39-220ENST00000455343 HCN2Q9UL51 889 aa5.78□□□□□ -1.48
RBM39-220ENST00000455343 ASXL1Q8IXJ9 1541 aa5.78□□□□□ -1.48
RBM39-220ENST00000455343 CHD2O14647 1828 aaKnown RBP5.77□□□□□ -1.49
RBM39-220ENST00000455343 DCDC2BA2VCK2 349 aa5.77□□□□□ -1.49
RBM39-220ENST00000455343 POM121CA8CG34 1229 aa5.77□□□□□ -1.49
RBM39-220ENST00000455343 MAPTP10636 758 aaKnown RBP5.77□□□□□ -1.49
RBM39-220ENST00000455343 PSME1Q06323 249 aa5.77□□□□□ -1.49
RBM39-220ENST00000455343 ARSJQ5FYB0 599 aaPredicted RBP5.77□□□□□ -1.49
RBM39-220ENST00000455343 DEPDC4Q8N2C3 294 aa5.77□□□□□ -1.49
RBM39-220ENST00000455343 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.77□□□□□ -1.49
RBM39-220ENST00000455343 ZDHHC1Q8WTX9 485 aa5.77□□□□□ -1.49
RBM39-220ENST00000455343 DDX17Q92841 729 aaKnown RBP5.77□□□□□ -1.49
RBM39-220ENST00000455343 ZIC5Q96T25 663 aa5.77□□□□□ -1.49
RBM39-220ENST00000455343 SCHIP1Q9P0W5 487 aaPredicted RBP5.77□□□□□ -1.49
RBM39-220ENST00000455343 USP21Q9UK80 565 aa5.77□□□□□ -1.49
RBM39-220ENST00000455343 TRPC5Q9UL62 973 aaPredicted RBP5.77□□□□□ -1.49
RBM39-220ENST00000455343 MKL2Q9ULH7 1088 aa5.77□□□□□ -1.49
RBM39-220ENST00000455343 SIPA1L2Q9P2F8 1722 aaPredicted RBP5.77□□□□□ -1.49
RBM39-220ENST00000455343 SETBP1Q9Y6X0 1596 aa5.76□□□□□ -1.49
RBM39-220ENST00000455343 FAM157BP0CG42 384 aa5.76□□□□□ -1.49
RBM39-220ENST00000455343 EPXP11678 715 aa5.76□□□□□ -1.49
RBM39-220ENST00000455343 HOXB4P17483 251 aaPredicted RBP5.76□□□□□ -1.49
RBM39-220ENST00000455343 EPHA4P54764 986 aa5.76□□□□□ -1.49
RBM39-220ENST00000455343 TNP2Q05952 138 aa5.76□□□□□ -1.49
RBM39-220ENST00000455343 FAM182BQ5T319 152 aa5.76□□□□□ -1.49
RBM39-220ENST00000455343 UCN2Q96RP3 112 aa5.76□□□□□ -1.49
RBM39-220ENST00000455343 ATRNO75882 1429 aa5.75□□□□□ -1.49
RBM39-220ENST00000455343 ANKRD50Q9ULJ7 1429 aa5.75□□□□□ -1.49
RBM39-220ENST00000455343 TMEM131LA2VDJ0 1609 aa5.75□□□□□ -1.49
RBM39-220ENST00000455343 KHNYNO15037 678 aaKnown RBP5.75□□□□□ -1.49
RBM39-220ENST00000455343 CD33P20138 364 aa5.75□□□□□ -1.49
RBM39-220ENST00000455343 TXLNAP40222 546 aa5.75□□□□□ -1.49
RBM39-220ENST00000455343 SAMD5Q5TGI4 173 aa5.75□□□□□ -1.49
RBM39-220ENST00000455343 TRIM50Q86XT4 487 aa5.75□□□□□ -1.49
RBM39-220ENST00000455343 PLEKHM2Q8IWE5 1019 aa5.75□□□□□ -1.49
RBM39-220ENST00000455343 SPOCK3Q9BQ16 436 aa5.75□□□□□ -1.49
RBM39-220ENST00000455343 RRAGCQ9HB90 399 aa5.75□□□□□ -1.49
RBM39-220ENST00000455343 PARP3Q9Y6F1 533 aa5.75□□□□□ -1.49
RBM39-220ENST00000455343 METP08581 1390 aa5.75□□□□□ -1.49
RBM39-220ENST00000455343 CFAP65Q6ZU64 1925 aaKnown RBP5.75□□□□□ -1.49
RBM39-220ENST00000455343 ADGRL2O95490 1459 aa5.75□□□□□ -1.49
RBM39-220ENST00000455343 BCL9LQ86UU0 1499 aa5.75□□□□□ -1.49
RBM39-220ENST00000455343 PTCH1Q13635 1447 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 ADGRL3Q9HAR2 1447 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 TRPM2O94759 1503 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 USP17L3A6NCW0 530 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 USP17L4A6NCW7 530 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 NEURL1BA8MQ27 555 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 MSTNO14793 375 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 AMPD1P23109 780 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 COL8A1P27658 744 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 TEAD4Q15561 434 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 USP17L2Q6R6M4 530 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 USP17L1Q7RTZ2 530 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 SLC9A9Q8IVB4 645 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 AVENQ9NQS1 362 aaPredicted RBP5.74□□□□□ -1.49
RBM39-220ENST00000455343 KIAA1024Q9UPX6 916 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 GJA3Q9Y6H8 435 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 C1orf167Q5SNV9 1468 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 NHSL1Q5SYE7 1610 aa5.74□□□□□ -1.49
RBM39-220ENST00000455343 KRBA1A5PL33 1030 aa5.73□□□□□ -1.49
RBM39-220ENST00000455343 EML1O00423 815 aa5.73□□□□□ -1.49
RBM39-220ENST00000455343 EFSO43281 561 aa5.73□□□□□ -1.49
RBM39-220ENST00000455343 ATP9BO43861 1147 aa5.73□□□□□ -1.49
RBM39-220ENST00000455343 PROCP04070 461 aa5.73□□□□□ -1.49
RBM39-220ENST00000455343 ADH6P28332 368 aa5.73□□□□□ -1.49
RBM39-220ENST00000455343 DGKGP49619 791 aa5.73□□□□□ -1.49
RBM39-220ENST00000455343 TBCELQ5QJ74 424 aa5.73□□□□□ -1.49
RBM39-220ENST00000455343 LINC00114Q6XXX2 140 aa5.73□□□□□ -1.49
RBM39-220ENST00000455343 BICDL1Q6ZP65 573 aa5.73□□□□□ -1.49
RBM39-220ENST00000455343 ALYREFQ86V81 257 aaKnown RBP5.73□□□□□ -1.49
RBM39-220ENST00000455343 FCHSD1Q86WN1 690 aa5.73□□□□□ -1.49
RBM39-220ENST00000455343 TPCN2Q8NHX9 752 aa5.73□□□□□ -1.49
RBM39-220ENST00000455343 L3MBTL2Q969R5 705 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms