RNA–Protein interactions for RNA: ENST00000455113.6

COPS7A-202, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-202ENST00000455113 IFIT5Q13325 482 aaKnown RBP22.36■■□□□ 1.17
COPS7A-202ENST00000455113 FAM161AQ3B820 660 aa22.36■■□□□ 1.17
COPS7A-202ENST00000455113 TBC1D16Q8TBP0 767 aa22.36■■□□□ 1.17
COPS7A-202ENST00000455113 POLLQ9UGP5 575 aa22.36■■□□□ 1.17
COPS7A-202ENST00000455113 RIMBP2O15034 1052 aa22.35■■□□□ 1.17
COPS7A-202ENST00000455113 HSPA6P17066 643 aa22.35■■□□□ 1.17
COPS7A-202ENST00000455113 COL4A1P02462 1669 aa22.35■■□□□ 1.17
COPS7A-202ENST00000455113 COL4A5P29400 1685 aa22.35■■□□□ 1.17
COPS7A-202ENST00000455113 TNIP1Q15025 636 aa22.34■■□□□ 1.17
COPS7A-202ENST00000455113 ATP2B4P23634 1241 aa22.34■■□□□ 1.17
COPS7A-202ENST00000455113 CCDC57Q2TAC2 916 aa22.34■■□□□ 1.17
COPS7A-202ENST00000455113 CIAPIN1Q6FI81 312 aa22.34■■□□□ 1.17
COPS7A-202ENST00000455113 API5Q9BZZ5 524 aaKnown RBP22.34■■□□□ 1.17
COPS7A-202ENST00000455113 NOB1Q9ULX3 412 aaKnown RBP22.34■■□□□ 1.17
COPS7A-202ENST00000455113 DUOX1Q9NRD9 1551 aa22.34■■□□□ 1.17
COPS7A-202ENST00000455113 KIF16BQ96L93 1317 aa22.33■■□□□ 1.17
COPS7A-202ENST00000455113 RARSP54136 660 aaKnown RBP22.33■■□□□ 1.17
COPS7A-202ENST00000455113 BRPF1P55201 1214 aaPredicted RBP22.33■■□□□ 1.17
COPS7A-202ENST00000455113 TAF7LQ5H9L4 462 aa22.33■■□□□ 1.17
COPS7A-202ENST00000455113 LMBR1LQ6UX01 489 aa22.33■■□□□ 1.17
COPS7A-202ENST00000455113 PNMA8AQ86V59 439 aaPredicted RBP22.33■■□□□ 1.17
COPS7A-202ENST00000455113 SPEF2Q9C093 1822 aa22.33■■□□□ 1.16
COPS7A-202ENST00000455113 FOXO4P98177 505 aa22.32■■□□□ 1.16
COPS7A-202ENST00000455113 TAF1DQ9H5J8 278 aaPredicted RBP22.32■■□□□ 1.16
COPS7A-202ENST00000455113 MINPP1Q9UNW1 487 aa22.32■■□□□ 1.16
COPS7A-202ENST00000455113 EPHX2P34913 555 aa22.31■■□□□ 1.16
COPS7A-202ENST00000455113 CXCL9Q07325 125 aa22.31■■□□□ 1.16
COPS7A-202ENST00000455113 EAPPQ56P03 285 aaPredicted RBP22.31■■□□□ 1.16
COPS7A-202ENST00000455113 DBNDD1Q9H9R9 158 aa22.31■■□□□ 1.16
COPS7A-202ENST00000455113 NBPF7P0C2Y1 421 aaPredicted RBP22.31■■□□□ 1.16
COPS7A-202ENST00000455113 CCT4P50991 539 aaKnown RBP22.31■■□□□ 1.16
COPS7A-202ENST00000455113 ANKRD2Q9GZV1 360 aa22.31■■□□□ 1.16
COPS7A-202ENST00000455113 LTBP1Q14766 1721 aa22.3■■□□□ 1.16
COPS7A-202ENST00000455113 RAD17O75943 681 aa22.3■■□□□ 1.16
COPS7A-202ENST00000455113 CLEC11AQ9Y240 323 aa22.3■■□□□ 1.16
COPS7A-202ENST00000455113 SUPT16HQ9Y5B9 1047 aaKnown RBP22.3■■□□□ 1.16
COPS7A-202ENST00000455113 IPO8O15397 1037 aaKnown RBP22.29■■□□□ 1.16
COPS7A-202ENST00000455113 ECE2O60344 883 aa22.29■■□□□ 1.16
COPS7A-202ENST00000455113 APLP1P51693 650 aa22.29■■□□□ 1.16
COPS7A-202ENST00000455113 UTYO14607 1347 aa22.29■■□□□ 1.16
COPS7A-202ENST00000455113 DOK7Q18PE1 504 aa22.28■■□□□ 1.16
COPS7A-202ENST00000455113 CHADLQ6NUI6 762 aa22.28■■□□□ 1.16
COPS7A-202ENST00000455113 LDHDQ86WU2 507 aa22.28■■□□□ 1.16
COPS7A-202ENST00000455113 SUCLG2Q96I99 432 aa22.28■■□□□ 1.16
COPS7A-202ENST00000455113 GPR101Q96P66 508 aaPredicted RBP22.28■■□□□ 1.16
COPS7A-202ENST00000455113 LEMD3Q9Y2U8 911 aa22.28■■□□□ 1.16
COPS7A-202ENST00000455113 KCNJ4P48050 445 aa22.28■■□□□ 1.16
COPS7A-202ENST00000455113 ARHGAP45Q92619 1136 aa22.28■■□□□ 1.16
COPS7A-202ENST00000455113 BCAR3O75815 825 aa22.27■■□□□ 1.16
COPS7A-202ENST00000455113 EPHA10Q5JZY3 1008 aa22.27■■□□□ 1.16
COPS7A-202ENST00000455113 HDAC5Q9UQL6 1122 aa22.27■■□□□ 1.16
COPS7A-202ENST00000455113 YDJCA8MPS7 323 aa22.26■■□□□ 1.15
COPS7A-202ENST00000455113 SCNN1DP51172 638 aa22.26■■□□□ 1.15
COPS7A-202ENST00000455113 LDHAL6AQ6ZMR3 332 aa22.26■■□□□ 1.15
COPS7A-202ENST00000455113 CHRNDQ07001 517 aa22.26■■□□□ 1.15
COPS7A-202ENST00000455113 FRAT1Q92837 279 aaPredicted RBP22.26■■□□□ 1.15
COPS7A-202ENST00000455113 USP44Q9H0E7 712 aa22.26■■□□□ 1.15
COPS7A-202ENST00000455113 CNNM1Q9NRU3 951 aa22.26■■□□□ 1.15
COPS7A-202ENST00000455113 GMPSP49915 693 aaPredicted RBP22.25■■□□□ 1.15
COPS7A-202ENST00000455113 BICC1Q9H694 974 aaKnown RBP22.25■■□□□ 1.15
COPS7A-202ENST00000455113 GPRC5DQ9NZD1 345 aa22.25■■□□□ 1.15
COPS7A-202ENST00000455113 ZNF804BA4D1E1 1349 aa22.24■■□□□ 1.15
COPS7A-202ENST00000455113 POTEIP0CG38 1075 aa22.24■■□□□ 1.15
COPS7A-202ENST00000455113 POTEJP0CG39 1038 aa22.24■■□□□ 1.15
COPS7A-202ENST00000455113 EPS15P42566 896 aa22.24■■□□□ 1.15
COPS7A-202ENST00000455113 USP50Q70EL3 339 aaPredicted RBP22.24■■□□□ 1.15
COPS7A-202ENST00000455113 MED23Q9ULK4 1368 aa22.24■■□□□ 1.15
COPS7A-202ENST00000455113 PSMD14O00487 310 aa22.23■■□□□ 1.15
COPS7A-202ENST00000455113 UBTFL1P0CB47 393 aaPredicted RBP22.23■■□□□ 1.15
COPS7A-202ENST00000455113 PODNQ7Z5L7 613 aa22.23■■□□□ 1.15
COPS7A-202ENST00000455113 ADARB2Q9NS39 739 aaKnown RBP22.23■■□□□ 1.15
COPS7A-202ENST00000455113 H7C1D1 291 aa22.23■■□□□ 1.15
COPS7A-202ENST00000455113 ZNF594Q96JF6 807 aaPredicted RBP22.23■■□□□ 1.15
COPS7A-202ENST00000455113 RPS12P25398 132 aaKnown RBP22.22■■□□□ 1.15
COPS7A-202ENST00000455113 RABL6Q3YEC7 729 aaPredicted RBP22.22■■□□□ 1.15
COPS7A-202ENST00000455113 KAZALD1Q96I82 304 aa22.22■■□□□ 1.15
COPS7A-202ENST00000455113 DPF2Q92785 391 aa22.21■■□□□ 1.15
COPS7A-202ENST00000455113 CNOT7Q9UIV1 285 aaKnown RBP22.21■■□□□ 1.15
COPS7A-202ENST00000455113 RRP1P56182 461 aaKnown RBP22.2■■□□□ 1.14
COPS7A-202ENST00000455113 ATF7IPQ6VMQ6 1270 aa22.2■■□□□ 1.14
COPS7A-202ENST00000455113 COA1Q9GZY4 146 aa22.2■■□□□ 1.14
COPS7A-202ENST00000455113 ZBTB12Q9Y330 459 aaPredicted RBP22.2■■□□□ 1.14
COPS7A-202ENST00000455113 PLIN1O60240 522 aa22.2■■□□□ 1.14
COPS7A-202ENST00000455113 TAF5LO75529 589 aa22.2■■□□□ 1.14
COPS7A-202ENST00000455113 ZKSCAN2Q63HK3 967 aa22.19■■□□□ 1.14
COPS7A-202ENST00000455113 MICALL2Q8IY33 904 aa22.19■■□□□ 1.14
COPS7A-202ENST00000455113 HELBQ8NG08 1087 aaPredicted RBP22.19■■□□□ 1.14
COPS7A-202ENST00000455113 KCNQ5Q9NR82 932 aa22.19■■□□□ 1.14
COPS7A-202ENST00000455113 VIL1P09327 827 aaKnown RBP22.18■■□□□ 1.14
COPS7A-202ENST00000455113 ANKRD44Q8N8A2 993 aa22.18■■□□□ 1.14
COPS7A-202ENST00000455113 USP17L3A6NCW0 530 aa22.17■■□□□ 1.14
COPS7A-202ENST00000455113 USP17L4A6NCW7 530 aa22.17■■□□□ 1.14
COPS7A-202ENST00000455113 WTIPA6NIX2 430 aaPredicted RBP22.17■■□□□ 1.14
COPS7A-202ENST00000455113 TRIM27P14373 513 aa22.17■■□□□ 1.14
COPS7A-202ENST00000455113 INTS3Q68E01 1043 aaKnown RBP22.17■■□□□ 1.14
COPS7A-202ENST00000455113 USP17L1Q7RTZ2 530 aa22.17■■□□□ 1.14
COPS7A-202ENST00000455113 CNTROBQ8N137 903 aa22.17■■□□□ 1.14
COPS7A-202ENST00000455113 FBXW7Q969H0 707 aa22.17■■□□□ 1.14
COPS7A-202ENST00000455113 MROH5Q6ZUA9 1318 aa22.17■■□□□ 1.14
COPS7A-202ENST00000455113 GNAI3P08754 354 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms