RNA–Protein interactions for RNA: ENST00000450056.6

CHFR-205, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2 BASIC

Gene CHFR, Length 3,250 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-205ENST00000450056 EYA1Q99502 592 aa16.37■□□□□ 0.21
CHFR-205ENST00000450056 GOLPH3LQ9H4A5 285 aa16.37■□□□□ 0.21
CHFR-205ENST00000450056 PDIA4P13667 645 aaKnown RBP16.37■□□□□ 0.21
CHFR-205ENST00000450056 CFAP100Q494V2 611 aa16.37■□□□□ 0.21
CHFR-205ENST00000450056 AOX1Q06278 1338 aa16.36■□□□□ 0.21
CHFR-205ENST00000450056 EVCP57679 992 aa16.36■□□□□ 0.21
CHFR-205ENST00000450056 STK38Q15208 465 aa16.36■□□□□ 0.21
CHFR-205ENST00000450056 E4F1Q66K89 784 aaPredicted RBP16.36■□□□□ 0.21
CHFR-205ENST00000450056 TTLL5Q6EMB2 1281 aa16.36■□□□□ 0.21
CHFR-205ENST00000450056 ZNF589Q86UQ0 364 aaPredicted RBP16.36■□□□□ 0.21
CHFR-205ENST00000450056 TLR7Q9NYK1 1049 aaKnown RBP16.36■□□□□ 0.21
CHFR-205ENST00000450056 TTC21AQ8NDW8 1320 aa16.36■□□□□ 0.21
CHFR-205ENST00000450056 CYP2C19P33261 490 aa16.36■□□□□ 0.21
CHFR-205ENST00000450056 GSDMDP57764 484 aa16.36■□□□□ 0.21
CHFR-205ENST00000450056 SMARCE1Q969G3 411 aa16.36■□□□□ 0.21
CHFR-205ENST00000450056 KIF2AO00139 706 aaPredicted RBP16.36■□□□□ 0.21
CHFR-205ENST00000450056 PLA2G4AP47712 749 aa16.36■□□□□ 0.21
CHFR-205ENST00000450056 TM6SF1Q9BZW5 370 aa16.36■□□□□ 0.21
CHFR-205ENST00000450056 FHOD1Q9Y613 1164 aa16.36■□□□□ 0.21
CHFR-205ENST00000450056 TOB2Q14106 344 aaPredicted RBP16.35■□□□□ 0.21
CHFR-205ENST00000450056 MCM6Q14566 821 aa16.35■□□□□ 0.21
CHFR-205ENST00000450056 DPCR1Q3MIW9 517 aa16.35■□□□□ 0.21
CHFR-205ENST00000450056 NEK1Q96PY6 1258 aa16.35■□□□□ 0.21
CHFR-205ENST00000450056 TOMM22Q9NS69 142 aa16.35■□□□□ 0.21
CHFR-205ENST00000450056 KIF20BQ96Q89 1820 aa16.35■□□□□ 0.21
CHFR-205ENST00000450056 ACEP12821 1306 aa16.35■□□□□ 0.21
CHFR-205ENST00000450056 ANKRD65E5RJM6 399 aa16.35■□□□□ 0.21
CHFR-205ENST00000450056 GNG11P61952 73 aa16.34■□□□□ 0.21
CHFR-205ENST00000450056 APOBRQ0VD83 1088 aa16.34■□□□□ 0.21
CHFR-205ENST00000450056 TTC21BQ7Z4L5 1316 aa16.34■□□□□ 0.21
CHFR-205ENST00000450056 PAXIP1Q6ZW49 1069 aaPredicted RBP16.34■□□□□ 0.21
CHFR-205ENST00000450056 DHX40Q8IX18 779 aaKnown RBP16.34■□□□□ 0.21
CHFR-205ENST00000450056 FEZ2Q9UHY8 353 aaPredicted RBP16.34■□□□□ 0.21
CHFR-205ENST00000450056 ATP7BP35670 1465 aa16.34■□□□□ 0.21
CHFR-205ENST00000450056 EDC4Q6P2E9 1401 aaKnown RBP16.34■□□□□ 0.21
CHFR-205ENST00000450056 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.34■□□□□ 0.21
CHFR-205ENST00000450056 ZSCAN26Q16670 478 aa16.34■□□□□ 0.21
CHFR-205ENST00000450056 PHACTR2O75167 634 aa16.33■□□□□ 0.2
CHFR-205ENST00000450056 MAP4K1Q92918 833 aa16.33■□□□□ 0.2
CHFR-205ENST00000450056 RIMS1Q86UR5 1692 aaKnown RBP16.33■□□□□ 0.2
CHFR-205ENST00000450056 ADAMTSL3P82987 1691 aa16.33■□□□□ 0.2
CHFR-205ENST00000450056 CTAGE5O15320 804 aa16.33■□□□□ 0.2
CHFR-205ENST00000450056 NLRP6P59044 892 aa16.33■□□□□ 0.2
CHFR-205ENST00000450056 RESTQ13127 1097 aa16.33■□□□□ 0.2
CHFR-205ENST00000450056 ARMCX5Q6P1M9 558 aa16.33■□□□□ 0.2
CHFR-205ENST00000450056 IL17REQ8NFR9 667 aa16.33■□□□□ 0.2
CHFR-205ENST00000450056 EAF2Q96CJ1 260 aaPredicted RBP16.33■□□□□ 0.2
CHFR-205ENST00000450056 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.33■□□□□ 0.2
CHFR-205ENST00000450056 KCNQ3O43525 872 aa16.32■□□□□ 0.2
CHFR-205ENST00000450056 CAVIN2O95810 425 aa16.32■□□□□ 0.2
CHFR-205ENST00000450056 SMC1AQ14683 1233 aaKnown RBP16.32■□□□□ 0.2
CHFR-205ENST00000450056 PTPRUQ92729 1446 aa16.32■□□□□ 0.2
CHFR-205ENST00000450056 TTC41PQ6P2S7 1318 aa16.32■□□□□ 0.2
CHFR-205ENST00000450056 ROBO2Q9HCK4 1378 aa16.32■□□□□ 0.2
CHFR-205ENST00000450056 CDC25BP30305 580 aa16.32■□□□□ 0.2
CHFR-205ENST00000450056 RASSF4Q9H2L5 321 aa16.32■□□□□ 0.2
CHFR-205ENST00000450056 ATP1A3P13637 1013 aa16.32■□□□□ 0.2
CHFR-205ENST00000450056 CHMP4CQ96CF2 233 aa16.32■□□□□ 0.2
CHFR-205ENST00000450056 ZNF396Q96N95 335 aaPredicted RBP16.32■□□□□ 0.2
CHFR-205ENST00000450056 MAP3K2Q9Y2U5 619 aa16.32■□□□□ 0.2
CHFR-205ENST00000450056 CDK12Q9NYV4 1490 aaPredicted RBP16.31■□□□□ 0.2
CHFR-205ENST00000450056 EPB41L2O43491 1005 aaKnown RBP16.31■□□□□ 0.2
CHFR-205ENST00000450056 KARSQ15046 597 aaKnown RBP16.31■□□□□ 0.2
CHFR-205ENST00000450056 TXLNBQ8N3L3 684 aa16.31■□□□□ 0.2
CHFR-205ENST00000450056 PTPDC1A2A3K4 754 aa16.31■□□□□ 0.2
CHFR-205ENST00000450056 SLC3A2P08195 630 aaKnown RBP16.31■□□□□ 0.2
CHFR-205ENST00000450056 ETF1P62495 437 aaKnown RBP16.31■□□□□ 0.2
CHFR-205ENST00000450056 FAM160A1Q05DH4 1040 aa16.31■□□□□ 0.2
CHFR-205ENST00000450056 ZSCAN16Q9H4T2 348 aaPredicted RBP16.31■□□□□ 0.2
CHFR-205ENST00000450056 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.31■□□□□ 0.2
CHFR-205ENST00000450056 SCRN1Q12765 414 aa16.3■□□□□ 0.2
CHFR-205ENST00000450056 SLFNL1Q499Z3 407 aa16.3■□□□□ 0.2
CHFR-205ENST00000450056 DDX46Q7L014 1031 aaKnown RBP16.3■□□□□ 0.2
CHFR-205ENST00000450056 CRB1P82279 1406 aa16.3■□□□□ 0.2
CHFR-205ENST00000450056 MARCKSP29966 332 aaPredicted RBP16.3■□□□□ 0.2
CHFR-205ENST00000450056 IRX3P78415 501 aaPredicted RBP16.3■□□□□ 0.2
CHFR-205ENST00000450056 POLA2Q14181 598 aa16.3■□□□□ 0.2
CHFR-205ENST00000450056 CREBRFQ8IUR6 639 aa16.3■□□□□ 0.2
CHFR-205ENST00000450056 AK7Q96M32 723 aa16.3■□□□□ 0.2
CHFR-205ENST00000450056 DNAJC5Q9H3Z4 198 aa16.3■□□□□ 0.2
CHFR-205ENST00000450056 ARFGAP3Q9NP61 516 aa16.3■□□□□ 0.2
CHFR-205ENST00000450056 ORC3Q9UBD5 711 aaPredicted RBP16.3■□□□□ 0.2
CHFR-205ENST00000450056 DIP2AQ14689 1571 aa16.3■□□□□ 0.2
CHFR-205ENST00000450056 CEP170BQ9Y4F5 1589 aaPredicted RBP16.3■□□□□ 0.2
CHFR-205ENST00000450056 H2AFXP16104 143 aaPredicted RBP16.3■□□□□ 0.2
CHFR-205ENST00000450056 UBASH3AP57075 661 aa16.3■□□□□ 0.2
CHFR-205ENST00000450056 SARM1Q6SZW1 724 aa16.3■□□□□ 0.2
CHFR-205ENST00000450056 CCDC150Q8NCX0 1101 aa16.3■□□□□ 0.2
CHFR-205ENST00000450056 LCMT1Q9UIC8 334 aa16.3■□□□□ 0.2
CHFR-205ENST00000450056 MON2Q7Z3U7 1717 aa16.3■□□□□ 0.2
CHFR-205ENST00000450056 TOPAZ1Q8N9V7 1692 aa16.29■□□□□ 0.2
CHFR-205ENST00000450056 HIP1O00291 1037 aa16.29■□□□□ 0.2
CHFR-205ENST00000450056 NDUFA8P51970 172 aa16.29■□□□□ 0.2
CHFR-205ENST00000450056 MRPS27Q92552 414 aaKnown RBP16.29■□□□□ 0.2
CHFR-205ENST00000450056 VPS18Q9P253 973 aa16.29■□□□□ 0.2
CHFR-205ENST00000450056 PUF60Q9UHX1 559 aaKnown RBP16.29■□□□□ 0.2
CHFR-205ENST00000450056 AKAP12Q02952 1782 aa16.29■□□□□ 0.2
CHFR-205ENST00000450056 ZNF142P52746 1687 aaPredicted RBP16.29■□□□□ 0.2
CHFR-205ENST00000450056 CWC15Q9P013 229 aaKnown RBP16.29■□□□□ 0.2
CHFR-205ENST00000450056 ERBB3P21860 1342 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms