RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 RRP1P56182 461 aaKnown RBP11.53□□□□□ -0.56
RFX3-207ENST00000449190 RPS8P62241 208 aaKnown RBP11.53□□□□□ -0.56
RFX3-207ENST00000449190 ITPRIPQ8IWB1 547 aa11.53□□□□□ -0.56
RFX3-207ENST00000449190 MPNDQ8N594 471 aa11.53□□□□□ -0.56
RFX3-207ENST00000449190 SUPT20HQ8NEM7 779 aa11.53□□□□□ -0.56
RFX3-207ENST00000449190 SBF1O95248 1867 aa11.53□□□□□ -0.56
RFX3-207ENST00000449190 GNAI3P08754 354 aa11.52□□□□□ -0.57
RFX3-207ENST00000449190 UBE3BQ7Z3V4 1068 aa11.52□□□□□ -0.57
RFX3-207ENST00000449190 C16orf71Q8IYS4 520 aaPredicted RBP11.52□□□□□ -0.57
RFX3-207ENST00000449190 TMEM57Q8N5G2 664 aa11.52□□□□□ -0.57
RFX3-207ENST00000449190 PANK1Q8TE04 598 aa11.52□□□□□ -0.57
RFX3-207ENST00000449190 JDP2Q8WYK2 163 aa11.52□□□□□ -0.57
RFX3-207ENST00000449190 JARID2Q92833 1246 aaPredicted RBP11.52□□□□□ -0.57
RFX3-207ENST00000449190 RTFDC1Q9BY42 306 aaPredicted RBP11.52□□□□□ -0.57
RFX3-207ENST00000449190 CACNA1FO60840 1977 aa11.52□□□□□ -0.57
RFX3-207ENST00000449190 FER1L6Q2WGJ9 1857 aa11.51□□□□□ -0.57
RFX3-207ENST00000449190 FZD9O00144 591 aa11.51□□□□□ -0.57
RFX3-207ENST00000449190 UBTFL1P0CB47 393 aaPredicted RBP11.51□□□□□ -0.57
RFX3-207ENST00000449190 CCDC152Q4G0S7 254 aa11.51□□□□□ -0.57
RFX3-207ENST00000449190 CELF1Q92879 486 aaKnown RBP11.51□□□□□ -0.57
RFX3-207ENST00000449190 TNNQ9UQP3 1299 aa11.51□□□□□ -0.57
RFX3-207ENST00000449190 SNED1Q8TER0 1413 aa11.51□□□□□ -0.57
RFX3-207ENST00000449190 TNRC6CQ9HCJ0 1690 aaKnown RBP11.5□□□□□ -0.57
RFX3-207ENST00000449190 POTECB2RU33 542 aa11.5□□□□□ -0.57
RFX3-207ENST00000449190 DDNO94850 711 aaPredicted RBP11.5□□□□□ -0.57
RFX3-207ENST00000449190 DPP8Q6V1X1 898 aaPredicted RBP11.5□□□□□ -0.57
RFX3-207ENST00000449190 LARGE2Q8N3Y3 721 aa11.5□□□□□ -0.57
RFX3-207ENST00000449190 RBM46Q8TBY0 533 aaKnown RBP11.5□□□□□ -0.57
RFX3-207ENST00000449190 PLA2G12BQ9BX93 195 aa11.5□□□□□ -0.57
RFX3-207ENST00000449190 DDX19BQ9UMR2 479 aa11.5□□□□□ -0.57
RFX3-207ENST00000449190 COG6Q9Y2V7 657 aa11.5□□□□□ -0.57
RFX3-207ENST00000449190 ANKRD36CQ5JPF3 1778 aa11.49□□□□□ -0.57
RFX3-207ENST00000449190 ARFGEF2Q9Y6D5 1785 aa11.49□□□□□ -0.57
RFX3-207ENST00000449190 RLBP1P12271 317 aa11.49□□□□□ -0.57
RFX3-207ENST00000449190 EIF6P56537 245 aaKnown RBP11.49□□□□□ -0.57
RFX3-207ENST00000449190 MVPQ14764 893 aaKnown RBP11.49□□□□□ -0.57
RFX3-207ENST00000449190 TTLL11Q8NHH1 800 aa11.49□□□□□ -0.57
RFX3-207ENST00000449190 USP44Q9H0E7 712 aa11.49□□□□□ -0.57
RFX3-207ENST00000449190 SEC31BQ9NQW1 1179 aa11.49□□□□□ -0.57
RFX3-207ENST00000449190 PPIP5K2O43314 1243 aa11.48□□□□□ -0.57
RFX3-207ENST00000449190 GNAI2P04899 355 aa11.48□□□□□ -0.57
RFX3-207ENST00000449190 CSF1RP07333 972 aa11.48□□□□□ -0.57
RFX3-207ENST00000449190 NBPF7P0C2Y1 421 aaPredicted RBP11.48□□□□□ -0.57
RFX3-207ENST00000449190 CASP7P55210 303 aa11.48□□□□□ -0.57
RFX3-207ENST00000449190 CTSWP56202 376 aa11.48□□□□□ -0.57
RFX3-207ENST00000449190 FSTL1Q12841 308 aa11.48□□□□□ -0.57
RFX3-207ENST00000449190 ANKRD18AQ8IVF6 992 aa11.48□□□□□ -0.57
RFX3-207ENST00000449190 NIM1KQ8IY84 436 aa11.48□□□□□ -0.57
RFX3-207ENST00000449190 L3MBTL3Q96JM7 780 aaPredicted RBP11.48□□□□□ -0.57
RFX3-207ENST00000449190 NSFL1CQ9UNZ2 370 aaKnown RBP11.48□□□□□ -0.57
RFX3-207ENST00000449190 UTYO14607 1347 aa11.48□□□□□ -0.57
RFX3-207ENST00000449190 IQCA1LA6NCM1 817 aa11.47□□□□□ -0.57
RFX3-207ENST00000449190 ZBTB7BO15156 539 aaPredicted RBP11.47□□□□□ -0.57
RFX3-207ENST00000449190 KIAA2012Q0VF49 1180 aa11.47□□□□□ -0.57
RFX3-207ENST00000449190 AOC3Q16853 763 aa11.47□□□□□ -0.57
RFX3-207ENST00000449190 C20orf194Q5TEA3 1177 aa11.47□□□□□ -0.57
RFX3-207ENST00000449190 SLC51AQ86UW1 340 aa11.47□□□□□ -0.57
RFX3-207ENST00000449190 GPC2Q8N158 579 aa11.47□□□□□ -0.57
RFX3-207ENST00000449190 SUCLG2Q96I99 432 aa11.47□□□□□ -0.57
RFX3-207ENST00000449190 CDC5LQ99459 802 aaKnown RBP11.47□□□□□ -0.57
RFX3-207ENST00000449190 MEIS3Q99687 375 aa11.47□□□□□ -0.57
RFX3-207ENST00000449190 PODXL2Q9NZ53 605 aa11.47□□□□□ -0.57
RFX3-207ENST00000449190 PCDH10Q9P2E7 1040 aa11.47□□□□□ -0.57
RFX3-207ENST00000449190 ZNRF3Q9ULT6 936 aa11.47□□□□□ -0.57
RFX3-207ENST00000449190 CHMP3Q9Y3E7 222 aa11.47□□□□□ -0.57
RFX3-207ENST00000449190 HSPA6P17066 643 aa11.46□□□□□ -0.57
RFX3-207ENST00000449190 GPSM2P81274 684 aa11.46□□□□□ -0.57
RFX3-207ENST00000449190 WASHC4Q2M389 1173 aa11.46□□□□□ -0.57
RFX3-207ENST00000449190 LMBR1LQ6UX01 489 aa11.46□□□□□ -0.57
RFX3-207ENST00000449190 SMC1BQ8NDV3 1235 aa11.46□□□□□ -0.57
RFX3-207ENST00000449190 CCDC85AQ96PX6 553 aaPredicted RBP11.46□□□□□ -0.57
RFX3-207ENST00000449190 PHF12Q96QT6 1004 aa11.46□□□□□ -0.57
RFX3-207ENST00000449190 EYA3Q99504 573 aa11.46□□□□□ -0.57
RFX3-207ENST00000449190 BSDC1Q9NW68 430 aaPredicted RBP11.46□□□□□ -0.57
RFX3-207ENST00000449190 UTRNP46939 3433 aa11.46□□□□□ -0.58
RFX3-207ENST00000449190 CCDC88AQ3V6T2 1871 aa11.46□□□□□ -0.58
RFX3-207ENST00000449190 RTL9Q8NET4 1388 aa11.45□□□□□ -0.58
RFX3-207ENST00000449190 ZNF541Q9H0D2 1346 aa11.45□□□□□ -0.58
RFX3-207ENST00000449190 C6orf229H3BNL8 230 aa11.45□□□□□ -0.58
RFX3-207ENST00000449190 FOXO4P98177 505 aa11.45□□□□□ -0.58
RFX3-207ENST00000449190 CCDC57Q2TAC2 916 aa11.45□□□□□ -0.58
RFX3-207ENST00000449190 TAF7LQ5H9L4 462 aa11.45□□□□□ -0.58
RFX3-207ENST00000449190 TBC1D16Q8TBP0 767 aa11.45□□□□□ -0.58
RFX3-207ENST00000449190 GREM2Q9H772 168 aa11.45□□□□□ -0.58
RFX3-207ENST00000449190 POLLQ9UGP5 575 aa11.45□□□□□ -0.58
RFX3-207ENST00000449190 LRRFIP2Q9Y608 721 aaKnown RBP11.45□□□□□ -0.58
RFX3-207ENST00000449190 DICER1Q9UPY3 1922 aaKnown RBP11.45□□□□□ -0.58
RFX3-207ENST00000449190 CACNA1SQ13698 1873 aa11.44□□□□□ -0.58
RFX3-207ENST00000449190 ANKRD18BA2A2Z9 1011 aa11.44□□□□□ -0.58
RFX3-207ENST00000449190 NEFLP07196 543 aa11.44□□□□□ -0.58
RFX3-207ENST00000449190 ATP2B4P23634 1241 aa11.44□□□□□ -0.58
RFX3-207ENST00000449190 IGHMBP2P38935 993 aaKnown RBP11.44□□□□□ -0.58
RFX3-207ENST00000449190 IFIT5Q13325 482 aaKnown RBP11.44□□□□□ -0.58
RFX3-207ENST00000449190 TNIP1Q15025 636 aa11.44□□□□□ -0.58
RFX3-207ENST00000449190 CRBNQ96SW2 442 aa11.44□□□□□ -0.58
RFX3-207ENST00000449190 ZC3H12CQ9C0D7 883 aaKnown RBP11.44□□□□□ -0.58
RFX3-207ENST00000449190 TAF1DQ9H5J8 278 aaPredicted RBP11.44□□□□□ -0.58
RFX3-207ENST00000449190 BICC1Q9H694 974 aaKnown RBP11.44□□□□□ -0.58
RFX3-207ENST00000449190 ANKIB1Q9P2G1 1089 aa11.44□□□□□ -0.58
RFX3-207ENST00000449190 HACL1Q9UJ83 578 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms