RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 VGLL2Q8N8G2 317 aa25.97■■□□□ 1.75
VPS13B-204ENST00000441350 OTUD7AQ8TE49 926 aaPredicted RBP25.97■■□□□ 1.75
VPS13B-204ENST00000441350 GPR108Q9NPR9 543 aa25.97■■□□□ 1.75
VPS13B-204ENST00000441350 SALL3Q9BXA9 1300 aa25.96■■□□□ 1.75
VPS13B-204ENST00000441350 RGS3P49796 1198 aa25.96■■□□□ 1.75
VPS13B-204ENST00000441350 METTL24Q5JXM2 366 aa25.96■■□□□ 1.75
VPS13B-204ENST00000441350 C2CD5Q86YS7 1000 aa25.96■■□□□ 1.75
VPS13B-204ENST00000441350 EAF2Q96CJ1 260 aaPredicted RBP25.96■■□□□ 1.75
VPS13B-204ENST00000441350 TNNI3KQ59H18 835 aa25.96■■□□□ 1.75
VPS13B-204ENST00000441350 MASTLQ96GX5 879 aa25.96■■□□□ 1.75
VPS13B-204ENST00000441350 BCL11AQ9H165 835 aa25.96■■□□□ 1.75
VPS13B-204ENST00000441350 FPGT-TNNI3KV9GXZ4 949 aa25.96■■□□□ 1.75
VPS13B-204ENST00000441350 H0YIN7 160 aa25.95■■□□□ 1.74
VPS13B-204ENST00000441350 BBOX1O75936 387 aa25.95■■□□□ 1.74
VPS13B-204ENST00000441350 PLEKHM2Q8IWE5 1019 aa25.95■■□□□ 1.74
VPS13B-204ENST00000441350 PDE8BO95263 885 aa25.94■■□□□ 1.74
VPS13B-204ENST00000441350 STYK1Q6J9G0 422 aa25.94■■□□□ 1.74
VPS13B-204ENST00000441350 MINPP1Q9UNW1 487 aa25.94■■□□□ 1.74
VPS13B-204ENST00000441350 A0A1B0GUL6 1792 aa25.94■■□□□ 1.74
VPS13B-204ENST00000441350 CHRNDQ07001 517 aa25.93■■□□□ 1.74
VPS13B-204ENST00000441350 AACSQ86V21 672 aa25.93■■□□□ 1.74
VPS13B-204ENST00000441350 ALDH1B1P30837 517 aa25.92■■□□□ 1.74
VPS13B-204ENST00000441350 AKAP2Q9Y2D5 859 aa25.92■■□□□ 1.74
VPS13B-204ENST00000441350 ZNF609O15014 1411 aa25.92■■□□□ 1.74
VPS13B-204ENST00000441350 CHRNA5P30532 468 aa25.92■■□□□ 1.74
VPS13B-204ENST00000441350 DLEC1Q9Y238 1755 aa25.91■■□□□ 1.74
VPS13B-204ENST00000441350 IFIT2P09913 472 aaKnown RBP25.91■■□□□ 1.74
VPS13B-204ENST00000441350 HELBQ8NG08 1087 aaPredicted RBP25.91■■□□□ 1.74
VPS13B-204ENST00000441350 STAP2Q9UGK3 403 aa25.91■■□□□ 1.74
VPS13B-204ENST00000441350 PDE1AP54750 535 aa25.9■■□□□ 1.74
VPS13B-204ENST00000441350 TMC4Q7Z404 712 aa25.9■■□□□ 1.74
VPS13B-204ENST00000441350 CCDC8Q9H0W5 538 aaPredicted RBP25.9■■□□□ 1.74
VPS13B-204ENST00000441350 OSBPL3Q9H4L5 887 aa25.9■■□□□ 1.74
VPS13B-204ENST00000441350 SPON1Q9HCB6 807 aa25.9■■□□□ 1.74
VPS13B-204ENST00000441350 A0A1B0GUL7 405 aa25.89■■□□□ 1.74
VPS13B-204ENST00000441350 MX1P20591 662 aa25.89■■□□□ 1.74
VPS13B-204ENST00000441350 TIMM10P62072 90 aa25.89■■□□□ 1.74
VPS13B-204ENST00000441350 ZNF622Q969S3 477 aaKnown RBP eCLIP25.89■■□□□ 1.748e-7■■■□□ 15.8
VPS13B-204ENST00000441350 KIAA1551Q9HCM1 1747 aa25.89■■□□□ 1.73
VPS13B-204ENST00000441350 TAF5LO75529 589 aa25.88■■□□□ 1.73
VPS13B-204ENST00000441350 FGFR2P21802 821 aa25.88■■□□□ 1.73
VPS13B-204ENST00000441350 ATP2B3Q16720 1220 aa25.88■■□□□ 1.73
VPS13B-204ENST00000441350 ANKRD2Q9GZV1 360 aa25.88■■□□□ 1.73
VPS13B-204ENST00000441350 TLR7Q9NYK1 1049 aaKnown RBP25.88■■□□□ 1.73
VPS13B-204ENST00000441350 DBNLQ9UJU6 430 aaKnown RBP25.88■■□□□ 1.73
VPS13B-204ENST00000441350 LRRC37AA6NMS7 1700 aa25.88■■□□□ 1.73
VPS13B-204ENST00000441350 SOCS7O14512 581 aa25.88■■□□□ 1.73
VPS13B-204ENST00000441350 PUM3Q15397 648 aaKnown RBP25.88■■□□□ 1.73
VPS13B-204ENST00000441350 PPEF1O14829 653 aaPredicted RBP25.87■■□□□ 1.73
VPS13B-204ENST00000441350 TGFB2P61812 414 aa25.87■■□□□ 1.73
VPS13B-204ENST00000441350 CNKSR1Q969H4 720 aa25.87■■□□□ 1.73
VPS13B-204ENST00000441350 KCNA3P22001 575 aa25.86■■□□□ 1.73
VPS13B-204ENST00000441350 SLC51AQ86UW1 340 aa25.86■■□□□ 1.73
VPS13B-204ENST00000441350 SP8Q8IXZ3 490 aa25.86■■□□□ 1.73
VPS13B-204ENST00000441350 NEUROD6Q96NK8 337 aa25.86■■□□□ 1.73
VPS13B-204ENST00000441350 DBNDD2Q9BQY9 259 aa25.86■■□□□ 1.73
VPS13B-204ENST00000441350 ATP6V0A2Q9Y487 856 aa25.86■■□□□ 1.73
VPS13B-204ENST00000441350 CD2APQ9Y5K6 639 aa25.86■■□□□ 1.73
VPS13B-204ENST00000441350 AOX1Q06278 1338 aa25.86■■□□□ 1.73
VPS13B-204ENST00000441350 DPEP1P16444 411 aa25.85■■□□□ 1.73
VPS13B-204ENST00000441350 LPIN2Q92539 896 aa25.85■■□□□ 1.73
VPS13B-204ENST00000441350 TTC41PQ6P2S7 1318 aa25.85■■□□□ 1.73
VPS13B-204ENST00000441350 CACNA1SQ13698 1873 aa25.85■■□□□ 1.73
VPS13B-204ENST00000441350 ARAP2Q8WZ64 1704 aa25.85■■□□□ 1.73
VPS13B-204ENST00000441350 SLX4Q8IY92 1834 aa25.85■■□□□ 1.73
VPS13B-204ENST00000441350 ECHDC1Q9NTX5 307 aa25.85■■□□□ 1.73
VPS13B-204ENST00000441350 A0A0G2JLW4 131 aa25.84■■□□□ 1.73
VPS13B-204ENST00000441350 SNAP23O00161 211 aa25.84■■□□□ 1.73
VPS13B-204ENST00000441350 UBE4AQ14139 1066 aa25.84■■□□□ 1.73
VPS13B-204ENST00000441350 TSHZ3Q63HK5 1081 aa25.84■■□□□ 1.73
VPS13B-204ENST00000441350 PRPF40BQ6NWY9 871 aaKnown RBP25.84■■□□□ 1.73
VPS13B-204ENST00000441350 XAGE2Q96GT9 111 aa25.84■■□□□ 1.73
VPS13B-204ENST00000441350 ADORA1P30542 326 aa25.83■■□□□ 1.73
VPS13B-204ENST00000441350 PI4K2BQ8TCG2 481 aa25.83■■□□□ 1.73
VPS13B-204ENST00000441350 GPATCH3Q96I76 525 aa25.83■■□□□ 1.73
VPS13B-204ENST00000441350 SLC5A1P13866 664 aa25.82■■□□□ 1.72
VPS13B-204ENST00000441350 XDHP47989 1333 aa25.82■■□□□ 1.72
VPS13B-204ENST00000441350 WTIPA6NIX2 430 aaPredicted RBP25.81■■□□□ 1.72
VPS13B-204ENST00000441350 GPSM2P81274 684 aa25.81■■□□□ 1.72
VPS13B-204ENST00000441350 TTC22Q5TAA0 569 aa25.81■■□□□ 1.72
VPS13B-204ENST00000441350 PODXL2Q9NZ53 605 aa25.81■■□□□ 1.72
VPS13B-204ENST00000441350 LTBP1Q14766 1721 aa25.81■■□□□ 1.72
VPS13B-204ENST00000441350 IFIT1P09914 478 aaKnown RBP25.81■■□□□ 1.72
VPS13B-204ENST00000441350 ANKIB1Q9P2G1 1089 aa25.81■■□□□ 1.72
VPS13B-204ENST00000441350 LEMD3Q9Y2U8 911 aa25.81■■□□□ 1.72
VPS13B-204ENST00000441350 TTLL6Q8N841 843 aa25.8■■□□□ 1.72
VPS13B-204ENST00000441350 C7orf43Q8WVR3 580 aa25.8■■□□□ 1.72
VPS13B-204ENST00000441350 ZNF804BA4D1E1 1349 aa25.79■■□□□ 1.72
VPS13B-204ENST00000441350 ERC2O15083 957 aa25.79■■□□□ 1.72
VPS13B-204ENST00000441350 GLRX3O76003 335 aaKnown RBP25.79■■□□□ 1.72
VPS13B-204ENST00000441350 GSPT1P15170 499 aaKnown RBP25.79■■□□□ 1.72
VPS13B-204ENST00000441350 BMP2KLQ5H9B9 411 aa25.79■■□□□ 1.72
VPS13B-204ENST00000441350 PPP1R1BQ9UD71 204 aaPredicted RBP25.79■■□□□ 1.72
VPS13B-204ENST00000441350 ATP5JP18859 108 aa25.78■■□□□ 1.72
VPS13B-204ENST00000441350 NSFL1CQ9UNZ2 370 aaKnown RBP25.78■■□□□ 1.72
VPS13B-204ENST00000441350 BRCA1P38398 1863 aaKnown RBP25.78■■□□□ 1.72
VPS13B-204ENST00000441350 KCNJ4P48050 445 aa25.77■■□□□ 1.72
VPS13B-204ENST00000441350 GORABQ5T7V8 394 aa25.77■■□□□ 1.72
VPS13B-204ENST00000441350 OLFM4Q6UX06 510 aa25.77■■□□□ 1.72
VPS13B-204ENST00000441350 IRS2Q9Y4H2 1338 aa25.77■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms