RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 BRPF1P55201 1214 aaPredicted RBP31.24■■■□□ 2.59
RAPGEF1-206ENST00000438647 FOXO4P98177 505 aa31.24■■■□□ 2.59
RAPGEF1-206ENST00000438647 MPHOSPH8Q99549 860 aa31.24■■■□□ 2.59
RAPGEF1-206ENST00000438647 ZC3H12CQ9C0D7 883 aaKnown RBP31.24■■■□□ 2.59
RAPGEF1-206ENST00000438647 CXCL9Q07325 125 aa31.23■■■□□ 2.59
RAPGEF1-206ENST00000438647 IFIT5Q13325 482 aaKnown RBP31.23■■■□□ 2.59
RAPGEF1-206ENST00000438647 CIAPIN1Q6FI81 312 aa31.23■■■□□ 2.59
RAPGEF1-206ENST00000438647 CHMP3Q9Y3E7 222 aa31.23■■■□□ 2.59
RAPGEF1-206ENST00000438647 RIMBP2O15034 1052 aa31.22■■■□□ 2.59
RAPGEF1-206ENST00000438647 ATP2B4P23634 1241 aa31.22■■■□□ 2.59
RAPGEF1-206ENST00000438647 EPHX2P34913 555 aa31.22■■■□□ 2.59
RAPGEF1-206ENST00000438647 TNIP1Q15025 636 aa31.22■■■□□ 2.59
RAPGEF1-206ENST00000438647 MINPP1Q9UNW1 487 aa31.22■■■□□ 2.59
RAPGEF1-206ENST00000438647 RARSP54136 660 aaKnown RBP31.21■■■□□ 2.59
RAPGEF1-206ENST00000438647 PNMA8AQ86V59 439 aaPredicted RBP31.21■■■□□ 2.59
RAPGEF1-206ENST00000438647 UTYO14607 1347 aa31.21■■■□□ 2.59
RAPGEF1-206ENST00000438647 APLP1P51693 650 aa31.2■■■□□ 2.59
RAPGEF1-206ENST00000438647 LMBR1LQ6UX01 489 aa31.2■■■□□ 2.59
RAPGEF1-206ENST00000438647 CCDC57Q2TAC2 916 aa31.19■■■□□ 2.58
RAPGEF1-206ENST00000438647 LDHDQ86WU2 507 aa31.19■■■□□ 2.58
RAPGEF1-206ENST00000438647 API5Q9BZZ5 524 aaKnown RBP31.19■■■□□ 2.58
RAPGEF1-206ENST00000438647 DBNDD1Q9H9R9 158 aa31.19■■■□□ 2.58
RAPGEF1-206ENST00000438647 NOB1Q9ULX3 412 aaKnown RBP31.19■■■□□ 2.58
RAPGEF1-206ENST00000438647 KIF16BQ96L93 1317 aa31.19■■■□□ 2.58
RAPGEF1-206ENST00000438647 YDJCA8MPS7 323 aa31.18■■■□□ 2.58
RAPGEF1-206ENST00000438647 G3V3G9 751 aa31.18■■■□□ 2.58
RAPGEF1-206ENST00000438647 RAD17O75943 681 aa31.18■■■□□ 2.58
RAPGEF1-206ENST00000438647 NBPF7P0C2Y1 421 aaPredicted RBP31.18■■■□□ 2.58
RAPGEF1-206ENST00000438647 SCNN1DP51172 638 aa31.18■■■□□ 2.58
RAPGEF1-206ENST00000438647 DCAF8Q5TAQ9 597 aa31.18■■■□□ 2.58
RAPGEF1-206ENST00000438647 CHADLQ6NUI6 762 aa31.18■■■□□ 2.58
RAPGEF1-206ENST00000438647 GPR101Q96P66 508 aaPredicted RBP31.18■■■□□ 2.58
RAPGEF1-206ENST00000438647 ANKRD2Q9GZV1 360 aa31.18■■■□□ 2.58
RAPGEF1-206ENST00000438647 ZBED9Q6R2W3 1325 aa31.18■■■□□ 2.58
RAPGEF1-206ENST00000438647 ECE2O60344 883 aa31.17■■■□□ 2.58
RAPGEF1-206ENST00000438647 EAPPQ56P03 285 aaPredicted RBP31.17■■■□□ 2.58
RAPGEF1-206ENST00000438647 EPHA10Q5JZY3 1008 aa31.17■■■□□ 2.58
RAPGEF1-206ENST00000438647 SPEF2Q9C093 1822 aa31.17■■■□□ 2.58
RAPGEF1-206ENST00000438647 CCT4P50991 539 aaKnown RBP31.16■■■□□ 2.58
RAPGEF1-206ENST00000438647 SUCLG2Q96I99 432 aa31.16■■■□□ 2.58
RAPGEF1-206ENST00000438647 CEP350Q5VT06 3117 aa31.16■■■□□ 2.58
RAPGEF1-206ENST00000438647 POTEIP0CG38 1075 aa31.15■■■□□ 2.58
RAPGEF1-206ENST00000438647 POTEJP0CG39 1038 aa31.15■■■□□ 2.58
RAPGEF1-206ENST00000438647 DOK7Q18PE1 504 aa31.15■■■□□ 2.58
RAPGEF1-206ENST00000438647 TAF7LQ5H9L4 462 aa31.15■■■□□ 2.58
RAPGEF1-206ENST00000438647 LEMD3Q9Y2U8 911 aa31.15■■■□□ 2.58
RAPGEF1-206ENST00000438647 GPRC5DQ9NZD1 345 aa31.14■■■□□ 2.58
RAPGEF1-206ENST00000438647 GMPSP49915 693 aaPredicted RBP31.13■■■□□ 2.57
RAPGEF1-206ENST00000438647 ARHGAP45Q92619 1136 aa31.13■■■□□ 2.57
RAPGEF1-206ENST00000438647 CLEC11AQ9Y240 323 aa31.13■■■□□ 2.57
RAPGEF1-206ENST00000438647 MED23Q9ULK4 1368 aa31.13■■■□□ 2.57
RAPGEF1-206ENST00000438647 EPS15P42566 896 aa31.12■■■□□ 2.57
RAPGEF1-206ENST00000438647 KAZALD1Q96I82 304 aa31.12■■■□□ 2.57
RAPGEF1-206ENST00000438647 USP44Q9H0E7 712 aa31.12■■■□□ 2.57
RAPGEF1-206ENST00000438647 CHRNDQ07001 517 aa31.11■■■□□ 2.57
RAPGEF1-206ENST00000438647 USP50Q70EL3 339 aaPredicted RBP31.11■■■□□ 2.57
RAPGEF1-206ENST00000438647 BICC1Q9H694 974 aaKnown RBP31.11■■■□□ 2.57
RAPGEF1-206ENST00000438647 ADARB2Q9NS39 739 aaKnown RBP31.11■■■□□ 2.57
RAPGEF1-206ENST00000438647 PSMD14O00487 310 aa31.1■■■□□ 2.57
RAPGEF1-206ENST00000438647 IPO8O15397 1037 aaKnown RBP31.1■■■□□ 2.57
RAPGEF1-206ENST00000438647 RABL6Q3YEC7 729 aaPredicted RBP31.1■■■□□ 2.57
RAPGEF1-206ENST00000438647 ZNF804BA4D1E1 1349 aa31.09■■■□□ 2.57
RAPGEF1-206ENST00000438647 KCNJ4P48050 445 aa31.09■■■□□ 2.57
RAPGEF1-206ENST00000438647 LDHAL6AQ6ZMR3 332 aa31.09■■■□□ 2.57
RAPGEF1-206ENST00000438647 PODNQ7Z5L7 613 aa31.09■■■□□ 2.57
RAPGEF1-206ENST00000438647 RPS12P25398 132 aaKnown RBP31.08■■■□□ 2.57
RAPGEF1-206ENST00000438647 DPF2Q92785 391 aa31.08■■■□□ 2.57
RAPGEF1-206ENST00000438647 CNNM1Q9NRU3 951 aa31.08■■■□□ 2.57
RAPGEF1-206ENST00000438647 ZNF594Q96JF6 807 aaPredicted RBP31.06■■■□□ 2.56
RAPGEF1-206ENST00000438647 HDAC5Q9UQL6 1122 aa31.06■■■□□ 2.56
RAPGEF1-206ENST00000438647 ADAMTSL1Q8N6G6 1762 aa31.06■■■□□ 2.56
RAPGEF1-206ENST00000438647 H7C1D1 291 aa31.05■■■□□ 2.56
RAPGEF1-206ENST00000438647 KCNQ5Q9NR82 932 aa31.05■■■□□ 2.56
RAPGEF1-206ENST00000438647 CNOT7Q9UIV1 285 aaKnown RBP31.05■■■□□ 2.56
RAPGEF1-206ENST00000438647 ZBTB12Q9Y330 459 aaPredicted RBP31.05■■■□□ 2.56
RAPGEF1-206ENST00000438647 WTIPA6NIX2 430 aaPredicted RBP31.04■■■□□ 2.56
RAPGEF1-206ENST00000438647 VIL1P09327 827 aaKnown RBP31.04■■■□□ 2.56
RAPGEF1-206ENST00000438647 UBTFL1P0CB47 393 aaPredicted RBP31.04■■■□□ 2.56
RAPGEF1-206ENST00000438647 ANKRD44Q8N8A2 993 aa31.04■■■□□ 2.56
RAPGEF1-206ENST00000438647 COA1Q9GZY4 146 aa31.04■■■□□ 2.56
RAPGEF1-206ENST00000438647 BCAR3O75815 825 aa31.03■■■□□ 2.56
RAPGEF1-206ENST00000438647 MICALL2Q8IY33 904 aa31.02■■■□□ 2.56
RAPGEF1-206ENST00000438647 FRAT1Q92837 279 aaPredicted RBP31.02■■■□□ 2.56
RAPGEF1-206ENST00000438647 TAF5LO75529 589 aa31.01■■■□□ 2.55
RAPGEF1-206ENST00000438647 MAP1SQ66K74 1059 aaPredicted RBP31.01■■■□□ 2.55
RAPGEF1-206ENST00000438647 INTS3Q68E01 1043 aaKnown RBP31.01■■■□□ 2.55
RAPGEF1-206ENST00000438647 ATF7IPQ6VMQ6 1270 aa31.01■■■□□ 2.55
RAPGEF1-206ENST00000438647 CNTROBQ8N137 903 aa31.01■■■□□ 2.55
RAPGEF1-206ENST00000438647 HELBQ8NG08 1087 aaPredicted RBP31.01■■■□□ 2.55
RAPGEF1-206ENST00000438647 SCN9AQ15858 1988 aa31.01■■■□□ 2.55
RAPGEF1-206ENST00000438647 USP17L3A6NCW0 530 aa31■■■□□ 2.55
RAPGEF1-206ENST00000438647 USP17L4A6NCW7 530 aa31■■■□□ 2.55
RAPGEF1-206ENST00000438647 TRIM27P14373 513 aa31■■■□□ 2.55
RAPGEF1-206ENST00000438647 USP17L1Q7RTZ2 530 aa31■■■□□ 2.55
RAPGEF1-206ENST00000438647 ITGBL1O95965 494 aaPredicted RBP30.99■■■□□ 2.55
RAPGEF1-206ENST00000438647 RSBN1LQ6PCB5 846 aaPredicted RBP30.99■■■□□ 2.55
RAPGEF1-206ENST00000438647 C15orf52Q6ZUT6 534 aaKnown RBP30.99■■■□□ 2.55
RAPGEF1-206ENST00000438647 AGBL3Q8NEM8 1001 aa30.99■■■□□ 2.55
RAPGEF1-206ENST00000438647 PASKQ96RG2 1323 aa30.98■■■□□ 2.55
RAPGEF1-206ENST00000438647 ZNF609O15014 1411 aa30.98■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms