RNA–Protein interactions for RNA: ENST00000438055.5

TTC3-209, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 3,606 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-209ENST00000438055 MED23Q9ULK4 1368 aa19.72■□□□□ 0.75
TTC3-209ENST00000438055 FAM177BA6PVY3 158 aa19.72■□□□□ 0.75
TTC3-209ENST00000438055 SF3A1Q15459 793 aaKnown RBP19.72■□□□□ 0.75
TTC3-209ENST00000438055 DDX19AQ9NUU7 478 aaKnown RBP19.72■□□□□ 0.75
TTC3-209ENST00000438055 CFAP45Q9UL16 551 aa19.72■□□□□ 0.75
TTC3-209ENST00000438055 NR1I2O75469 434 aa19.71■□□□□ 0.75
TTC3-209ENST00000438055 RFX5P48382 616 aaPredicted RBP19.71■□□□□ 0.75
TTC3-209ENST00000438055 EVA1CP58658 441 aa19.71■□□□□ 0.75
TTC3-209ENST00000438055 TTC39AQ5SRH9 613 aa19.71■□□□□ 0.75
TTC3-209ENST00000438055 CCDC73Q6ZRK6 1079 aa19.71■□□□□ 0.75
TTC3-209ENST00000438055 PDCL3Q9H2J4 239 aa19.71■□□□□ 0.75
TTC3-209ENST00000438055 KDM6AO15550 1401 aaPredicted RBP19.71■□□□□ 0.75
TTC3-209ENST00000438055 ME1P48163 572 aa19.71■□□□□ 0.75
TTC3-209ENST00000438055 PIBF1Q8WXW3 757 aa19.71■□□□□ 0.75
TTC3-209ENST00000438055 BECN2A8MW95 431 aa19.71■□□□□ 0.75
TTC3-209ENST00000438055 ZNF165P49910 485 aa19.71■□□□□ 0.75
TTC3-209ENST00000438055 BCL11BQ9C0K0 894 aaPredicted RBP19.71■□□□□ 0.75
TTC3-209ENST00000438055 DHX32Q7L7V1 743 aaKnown RBP19.7■□□□□ 0.74
TTC3-209ENST00000438055 ZCRB1Q8TBF4 217 aaKnown RBP19.7■□□□□ 0.74
TTC3-209ENST00000438055 A0A1B0GUL7 405 aa19.7■□□□□ 0.74
TTC3-209ENST00000438055 SCRN1Q12765 414 aa19.7■□□□□ 0.74
TTC3-209ENST00000438055 FTOQ9C0B1 505 aaKnown RBP eCLIP19.7■□□□□ 0.74
TTC3-209ENST00000438055 PTPDC1A2A3K4 754 aa19.7■□□□□ 0.74
TTC3-209ENST00000438055 IL15P40933 162 aaPredicted RBP19.7■□□□□ 0.74
TTC3-209ENST00000438055 CCDC158Q5M9N0 1113 aa19.7■□□□□ 0.74
TTC3-209ENST00000438055 PUS3Q9BZE2 481 aaKnown RBP19.7■□□□□ 0.74
TTC3-209ENST00000438055 PTGS1P23219 599 aa19.69■□□□□ 0.74
TTC3-209ENST00000438055 TTLL5Q6EMB2 1281 aa19.69■□□□□ 0.74
TTC3-209ENST00000438055 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.69■□□□□ 0.742e-8■■■□□ 18.7
TTC3-209ENST00000438055 C1orf167Q5SNV9 1468 aa19.69■□□□□ 0.74
TTC3-209ENST00000438055 NBPF26B4DH59 902 aa19.69■□□□□ 0.74
TTC3-209ENST00000438055 NBPF14Q5TI25 921 aa19.69■□□□□ 0.74
TTC3-209ENST00000438055 NBPF10Q6P3W6 841 aaKnown RBP19.69■□□□□ 0.74
TTC3-209ENST00000438055 NBPF15Q8N660 670 aa19.69■□□□□ 0.74
TTC3-209ENST00000438055 CBX8Q9HC52 389 aa19.69■□□□□ 0.74
TTC3-209ENST00000438055 MRVI1Q9Y6F6 885 aa19.69■□□□□ 0.74
TTC3-209ENST00000438055 TMEM94Q12767 1356 aa19.68■□□□□ 0.74
TTC3-209ENST00000438055 CPLX1O14810 134 aa19.68■□□□□ 0.74
TTC3-209ENST00000438055 CCDC186Q7Z3E2 898 aa19.68■□□□□ 0.74
TTC3-209ENST00000438055 ZNF609O15014 1411 aa19.68■□□□□ 0.74
TTC3-209ENST00000438055 KINO60870 393 aaKnown RBP19.68■□□□□ 0.74
TTC3-209ENST00000438055 APPP05067 770 aa19.68■□□□□ 0.74
TTC3-209ENST00000438055 HMGB1P09429 215 aaKnown RBP19.68■□□□□ 0.74
TTC3-209ENST00000438055 MED1Q15648 1581 aaPredicted RBP19.68■□□□□ 0.74
TTC3-209ENST00000438055 MEGF6O75095 1541 aa19.68■□□□□ 0.74
TTC3-209ENST00000438055 EYA2O00167 538 aa19.68■□□□□ 0.74
TTC3-209ENST00000438055 AP5Z1O43299 807 aa19.68■□□□□ 0.74
TTC3-209ENST00000438055 STOX1Q6ZVD7 989 aa19.68■□□□□ 0.74
TTC3-209ENST00000438055 A0A0G2JLW4 131 aa19.67■□□□□ 0.74
TTC3-209ENST00000438055 TERF1P54274 439 aa19.67■□□□□ 0.74
TTC3-209ENST00000438055 RABL6Q3YEC7 729 aaPredicted RBP19.67■□□□□ 0.74
TTC3-209ENST00000438055 CCAR1Q8IX12 1150 aaKnown RBP19.67■□□□□ 0.74
TTC3-209ENST00000438055 GPTP24298 496 aa19.66■□□□□ 0.74
TTC3-209ENST00000438055 RALYLQ86SE5 291 aaKnown RBP19.66■□□□□ 0.74
TTC3-209ENST00000438055 CADPS2Q86UW7 1296 aa19.66■□□□□ 0.74
TTC3-209ENST00000438055 SDF4Q9BRK5 362 aa19.66■□□□□ 0.74
TTC3-209ENST00000438055 FUCA2Q9BTY2 467 aa19.66■□□□□ 0.74
TTC3-209ENST00000438055 PYCARDQ9ULZ3 195 aa19.66■□□□□ 0.74
TTC3-209ENST00000438055 DYNC1I1O14576 645 aa19.66■□□□□ 0.74
TTC3-209ENST00000438055 ZSCAN16Q9H4T2 348 aaPredicted RBP19.66■□□□□ 0.74
TTC3-209ENST00000438055 OTUD7BQ6GQQ9 843 aa19.66■□□□□ 0.74
TTC3-209ENST00000438055 FAM89AQ96GI7 184 aa19.66■□□□□ 0.74
TTC3-209ENST00000438055 PGBD1Q96JS3 809 aa19.66■□□□□ 0.74
TTC3-209ENST00000438055 CLSTN2Q9H4D0 955 aa19.66■□□□□ 0.74
TTC3-209ENST00000438055 ELP1O95163 1332 aa19.66■□□□□ 0.74
TTC3-209ENST00000438055 A0A087WWV3 80 aa19.65■□□□□ 0.74
TTC3-209ENST00000438055 ERCC4Q92889 916 aaPredicted RBP19.65■□□□□ 0.74
TTC3-209ENST00000438055 OVOS2A0A0G2JMS6 1433 aa19.65■□□□□ 0.74
TTC3-209ENST00000438055 MARF1Q9Y4F3 1742 aaKnown RBP19.65■□□□□ 0.74
TTC3-209ENST00000438055 RNF113AO15541 343 aaKnown RBP19.65■□□□□ 0.74
TTC3-209ENST00000438055 HSPD1P10809 573 aaKnown RBP19.65■□□□□ 0.74
TTC3-209ENST00000438055 HMGN5P82970 282 aaKnown RBP19.65■□□□□ 0.74
TTC3-209ENST00000438055 SYTL4Q96C24 671 aaPredicted RBP19.65■□□□□ 0.74
TTC3-209ENST00000438055 COL15A1P39059 1388 aa19.65■□□□□ 0.74
TTC3-209ENST00000438055 E7EWF7 191 aa19.65■□□□□ 0.74
TTC3-209ENST00000438055 POLR3DP05423 398 aaPredicted RBP19.65■□□□□ 0.74
TTC3-209ENST00000438055 TPM3P06753 285 aa19.65■□□□□ 0.74
TTC3-209ENST00000438055 USPL1Q5W0Q7 1092 aa19.65■□□□□ 0.74
TTC3-209ENST00000438055 ZNF396Q96N95 335 aaPredicted RBP19.64■□□□□ 0.74
TTC3-209ENST00000438055 FOXO4P98177 505 aa19.64■□□□□ 0.73
TTC3-209ENST00000438055 ZNF592Q92610 1267 aa19.64■□□□□ 0.73
TTC3-209ENST00000438055 KDM3BQ7LBC6 1761 aa19.64■□□□□ 0.73
TTC3-209ENST00000438055 RESTQ13127 1097 aa19.64■□□□□ 0.73
TTC3-209ENST00000438055 GNL2Q13823 731 aaKnown RBP19.64■□□□□ 0.73
TTC3-209ENST00000438055 LRRFIP1Q32MZ4 808 aaKnown RBP19.64■□□□□ 0.73
TTC3-209ENST00000438055 TSGA10IPQ3SY00 556 aa19.64■□□□□ 0.73
TTC3-209ENST00000438055 GPHNQ9NQX3 736 aaPredicted RBP19.64■□□□□ 0.73
TTC3-209ENST00000438055 HELLSQ9NRZ9 838 aa19.64■□□□□ 0.73
TTC3-209ENST00000438055 ATG9AQ7Z3C6 839 aa19.63■□□□□ 0.73
TTC3-209ENST00000438055 FSIP1Q8NA03 581 aa19.63■□□□□ 0.73
TTC3-209ENST00000438055 H7C1W4 665 aa19.63■□□□□ 0.73
TTC3-209ENST00000438055 HSPA2P54652 639 aa19.63■□□□□ 0.73
TTC3-209ENST00000438055 STK38Q15208 465 aa19.63■□□□□ 0.73
TTC3-209ENST00000438055 LRMPQ12912 555 aa19.63■□□□□ 0.73
TTC3-209ENST00000438055 IMMTQ16891 758 aaKnown RBP19.63■□□□□ 0.73
TTC3-209ENST00000438055 NSUN7Q8NE18 718 aaKnown RBP19.63■□□□□ 0.73
TTC3-209ENST00000438055 CLIP2Q9UDT6 1046 aa19.63■□□□□ 0.73
TTC3-209ENST00000438055 KAT6BQ8WYB5 2073 aa19.62■□□□□ 0.73
TTC3-209ENST00000438055 ADORA1P30542 326 aa19.62■□□□□ 0.73
TTC3-209ENST00000438055 FILIP1Q7Z7B0 1213 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms