RNA–Protein interactions for RNA: ENST00000431275.1

SPTLC3-202, Transcript of serine palmitoyltransferase long chain base subunit 3, humanhuman

TSL 2

Gene SPTLC3, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3-202ENST00000431275 CHD4Q14839 1912 aa13.9□□□□□ -0.18
SPTLC3-202ENST00000431275 C6orf229H3BNL8 230 aa13.89□□□□□ -0.19
SPTLC3-202ENST00000431275 MVPQ14764 893 aaKnown RBP13.89□□□□□ -0.19
SPTLC3-202ENST00000431275 TBC1D16Q8TBP0 767 aa13.89□□□□□ -0.19
SPTLC3-202ENST00000431275 VPS33BQ9H267 617 aa13.89□□□□□ -0.19
SPTLC3-202ENST00000431275 CNNM1Q9NRU3 951 aa13.89□□□□□ -0.19
SPTLC3-202ENST00000431275 XDHP47989 1333 aa13.89□□□□□ -0.19
SPTLC3-202ENST00000431275 LRRC37AA6NMS7 1700 aa13.88□□□□□ -0.19
SPTLC3-202ENST00000431275 RFX5P48382 616 aaPredicted RBP13.88□□□□□ -0.19
SPTLC3-202ENST00000431275 LARGE2Q8N3Y3 721 aa13.88□□□□□ -0.19
SPTLC3-202ENST00000431275 KLHDC4Q8TBB5 520 aa13.88□□□□□ -0.19
SPTLC3-202ENST00000431275 PUS3Q9BZE2 481 aaKnown RBP13.88□□□□□ -0.19
SPTLC3-202ENST00000431275 ANKRD2Q9GZV1 360 aa13.88□□□□□ -0.19
SPTLC3-202ENST00000431275 GGA1Q9UJY5 639 aa13.88□□□□□ -0.19
SPTLC3-202ENST00000431275 SBF1O95248 1867 aa13.88□□□□□ -0.19
SPTLC3-202ENST00000431275 WTIPA6NIX2 430 aaPredicted RBP13.87□□□□□ -0.19
SPTLC3-202ENST00000431275 PPIP5K2O43314 1243 aa13.87□□□□□ -0.19
SPTLC3-202ENST00000431275 UFL1O94874 794 aa13.87□□□□□ -0.19
SPTLC3-202ENST00000431275 ATP2B4P23634 1241 aa13.87□□□□□ -0.19
SPTLC3-202ENST00000431275 RRP1P56182 461 aaKnown RBP13.87□□□□□ -0.19
SPTLC3-202ENST00000431275 CHRNDQ07001 517 aa13.87□□□□□ -0.19
SPTLC3-202ENST00000431275 KIAA2012Q0VF49 1180 aa13.87□□□□□ -0.19
SPTLC3-202ENST00000431275 AOC3Q16853 763 aa13.87□□□□□ -0.19
SPTLC3-202ENST00000431275 WASHC4Q2M389 1173 aa13.87□□□□□ -0.19
SPTLC3-202ENST00000431275 JDP2Q8WYK2 163 aa13.87□□□□□ -0.19
SPTLC3-202ENST00000431275 EYA3Q99504 573 aa13.87□□□□□ -0.19
SPTLC3-202ENST00000431275 UTRNP46939 3433 aa13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 RIMBP2O15034 1052 aa13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 SRGAP3O43295 1099 aa13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 TAF5LO75529 589 aa13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 PTPN12Q05209 780 aaKnown RBP13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 MTX1Q13505 466 aa13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 LRRC24Q50LG9 513 aa13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 HELBQ8NG08 1087 aaPredicted RBP13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 GPR101Q96P66 508 aaPredicted RBP13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 ZC3H12CQ9C0D7 883 aaKnown RBP13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 C1orf115Q9H7X2 142 aa13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 DDX19BQ9UMR2 479 aa13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 LEMD3Q9Y2U8 911 aa13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 RIPOR2Q9Y4F9 1068 aa13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 DUOX1Q9NRD9 1551 aa13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 ZC3H4Q9UPT8 1303 aaKnown RBP13.86□□□□□ -0.19
SPTLC3-202ENST00000431275 FZD9O00144 591 aa13.85□□□□□ -0.19
SPTLC3-202ENST00000431275 NIM1KQ8IY84 436 aa13.85□□□□□ -0.19
SPTLC3-202ENST00000431275 CHMP4BQ9H444 224 aaKnown RBP13.85□□□□□ -0.19
SPTLC3-202ENST00000431275 CCDC88AQ3V6T2 1871 aa13.84□□□□□ -0.19
SPTLC3-202ENST00000431275 PNMA6EA0A0J9YXQ4 647 aa13.84□□□□□ -0.19
SPTLC3-202ENST00000431275 EYA2O00167 538 aa13.84□□□□□ -0.19
SPTLC3-202ENST00000431275 ATP8B2P98198 1209 aa13.84□□□□□ -0.19
SPTLC3-202ENST00000431275 DPY19L2Q6NUT2 758 aa13.84□□□□□ -0.19
SPTLC3-202ENST00000431275 ZNF784Q8NCA9 323 aaPredicted RBP13.84□□□□□ -0.19
SPTLC3-202ENST00000431275 COPRSQ9NQ92 184 aa13.84□□□□□ -0.19
SPTLC3-202ENST00000431275 ZBTB40Q9NUA8 1239 aa13.84□□□□□ -0.19
SPTLC3-202ENST00000431275 ZNRF3Q9ULT6 936 aa13.84□□□□□ -0.19
SPTLC3-202ENST00000431275 PA2G4Q9UQ80 394 aaKnown RBP13.84□□□□□ -0.19
SPTLC3-202ENST00000431275 SPEF2Q9C093 1822 aa13.84□□□□□ -0.19
SPTLC3-202ENST00000431275 ZNF804BA4D1E1 1349 aa13.84□□□□□ -0.19
SPTLC3-202ENST00000431275 MROH5Q6ZUA9 1318 aa13.84□□□□□ -0.19
SPTLC3-202ENST00000431275 LTBP1Q14766 1721 aa13.84□□□□□ -0.19
SPTLC3-202ENST00000431275 COL4A5P29400 1685 aa13.83□□□□□ -0.2
SPTLC3-202ENST00000431275 GLTPD2A6NH11 291 aa13.83□□□□□ -0.2
SPTLC3-202ENST00000431275 SNAP23O00161 211 aa13.83□□□□□ -0.2
SPTLC3-202ENST00000431275 KCNJ4P48050 445 aa13.83□□□□□ -0.2
SPTLC3-202ENST00000431275 DOK7Q18PE1 504 aa13.83□□□□□ -0.2
SPTLC3-202ENST00000431275 ZNF526Q8TF50 670 aaPredicted RBP13.83□□□□□ -0.2
SPTLC3-202ENST00000431275 SIL1Q9H173 461 aa13.83□□□□□ -0.2
SPTLC3-202ENST00000431275 FBXO3Q9UK99 471 aa13.83□□□□□ -0.2
SPTLC3-202ENST00000431275 CIAO1O76071 339 aa13.82□□□□□ -0.2
SPTLC3-202ENST00000431275 EIF6P56537 245 aaKnown RBP13.82□□□□□ -0.2
SPTLC3-202ENST00000431275 POLA2Q14181 598 aa13.82□□□□□ -0.2
SPTLC3-202ENST00000431275 METTL24Q5JXM2 366 aa13.82□□□□□ -0.2
SPTLC3-202ENST00000431275 ATG9AQ7Z3C6 839 aa13.82□□□□□ -0.2
SPTLC3-202ENST00000431275 DBNDD1Q9H9R9 158 aa13.82□□□□□ -0.2
SPTLC3-202ENST00000431275 SUPT16HQ9Y5B9 1047 aaKnown RBP13.82□□□□□ -0.2
SPTLC3-202ENST00000431275 DICER1Q9UPY3 1922 aaKnown RBP13.82□□□□□ -0.2
SPTLC3-202ENST00000431275 G3V3G9 751 aa13.81□□□□□ -0.2
SPTLC3-202ENST00000431275 DDNO94850 711 aaPredicted RBP13.81□□□□□ -0.2
SPTLC3-202ENST00000431275 PDE8BO95263 885 aa13.81□□□□□ -0.2
SPTLC3-202ENST00000431275 UBE4AQ14139 1066 aa13.81□□□□□ -0.2
SPTLC3-202ENST00000431275 DCAF8Q5TAQ9 597 aa13.81□□□□□ -0.2
SPTLC3-202ENST00000431275 CEP85Q6P2H3 762 aa13.81□□□□□ -0.2
SPTLC3-202ENST00000431275 TXNRD3Q86VQ6 643 aa13.81□□□□□ -0.2
SPTLC3-202ENST00000431275 VGLL2Q8N8G2 317 aa13.81□□□□□ -0.2
SPTLC3-202ENST00000431275 SSH3Q8TE77 659 aa13.81□□□□□ -0.2
SPTLC3-202ENST00000431275 KDM2BQ8NHM5 1336 aa13.81□□□□□ -0.2
SPTLC3-202ENST00000431275 ZNF541Q9H0D2 1346 aa13.81□□□□□ -0.2
SPTLC3-202ENST00000431275 MED23Q9ULK4 1368 aa13.81□□□□□ -0.2
SPTLC3-202ENST00000431275 YDJCA8MPS7 323 aa13.8□□□□□ -0.2
SPTLC3-202ENST00000431275 ECE2O60344 883 aa13.8□□□□□ -0.2
SPTLC3-202ENST00000431275 KLRK1P26718 216 aa13.8□□□□□ -0.2
SPTLC3-202ENST00000431275 IL15P40933 162 aaPredicted RBP13.8□□□□□ -0.2
SPTLC3-202ENST00000431275 CXCL9Q07325 125 aa13.8□□□□□ -0.2
SPTLC3-202ENST00000431275 C15orf52Q6ZUT6 534 aaKnown RBP13.8□□□□□ -0.2
SPTLC3-202ENST00000431275 GPBP1L1Q9HC44 474 aaPredicted RBP13.8□□□□□ -0.2
SPTLC3-202ENST00000431275 TIAM2Q8IVF5 1701 aa13.8□□□□□ -0.2
SPTLC3-202ENST00000431275 RAD17O75943 681 aa13.79□□□□□ -0.2
SPTLC3-202ENST00000431275 G3BP1Q13283 466 aaKnown RBP eCLIP13.79□□□□□ -0.2
SPTLC3-202ENST00000431275 RPAP2Q8IXW5 612 aaPredicted RBP13.79□□□□□ -0.2
SPTLC3-202ENST00000431275 GPC2Q8N158 579 aa13.79□□□□□ -0.2
SPTLC3-202ENST00000431275 RRAGCQ9HB90 399 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms