RNA–Protein interactions for RNA: ENST00000430038.5

CPSF4-203, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 735 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-203ENST00000430038 CNOT7Q9UIV1 285 aaKnown RBP22■■□□□ 1.11
CPSF4-203ENST00000430038 RASSF10A6NK89 507 aa21.99■■□□□ 1.11
CPSF4-203ENST00000430038 TNIP1Q15025 636 aa21.99■■□□□ 1.11
CPSF4-203ENST00000430038 PODXL2Q9NZ53 605 aa21.99■■□□□ 1.11
CPSF4-203ENST00000430038 CDHR2Q9BYE9 1310 aa21.99■■□□□ 1.11
CPSF4-203ENST00000430038 NEURL1BA8MQ27 555 aa21.98■■□□□ 1.11
CPSF4-203ENST00000430038 DEFB115Q30KQ5 88 aa21.98■■□□□ 1.11
CPSF4-203ENST00000430038 CCDC152Q4G0S7 254 aa21.98■■□□□ 1.11
CPSF4-203ENST00000430038 TTLL11Q8NHH1 800 aa21.98■■□□□ 1.11
CPSF4-203ENST00000430038 BCL2L13Q9BXK5 485 aa21.98■■□□□ 1.11
CPSF4-203ENST00000430038 GLIS2Q9BZE0 524 aaPredicted RBP21.98■■□□□ 1.11
CPSF4-203ENST00000430038 H7C1W4 665 aa21.97■■□□□ 1.11
CPSF4-203ENST00000430038 FOXN1O15353 648 aa21.97■■□□□ 1.11
CPSF4-203ENST00000430038 ECE2O60344 883 aa21.97■■□□□ 1.11
CPSF4-203ENST00000430038 EXOSC9Q06265 439 aaKnown RBP21.97■■□□□ 1.11
CPSF4-203ENST00000430038 STK31Q9BXU1 1019 aa21.97■■□□□ 1.11
CPSF4-203ENST00000430038 CTSWP56202 376 aa21.96■■□□□ 1.11
CPSF4-203ENST00000430038 FLIIQ13045 1269 aa21.96■■□□□ 1.11
CPSF4-203ENST00000430038 SAMD7Q7Z3H4 446 aa21.96■■□□□ 1.11
CPSF4-203ENST00000430038 WDR63Q8IWG1 891 aa21.96■■□□□ 1.11
CPSF4-203ENST00000430038 MICALL2Q8IY33 904 aa21.96■■□□□ 1.11
CPSF4-203ENST00000430038 GREM2Q9H772 168 aa21.96■■□□□ 1.11
CPSF4-203ENST00000430038 PSME4Q14997 1843 aa21.95■■□□□ 1.1
CPSF4-203ENST00000430038 CASP7P55210 303 aa21.95■■□□□ 1.1
CPSF4-203ENST00000430038 ABT1Q9ULW3 272 aaKnown RBP21.95■■□□□ 1.1
CPSF4-203ENST00000430038 UFL1O94874 794 aa21.94■■□□□ 1.1
CPSF4-203ENST00000430038 FAM9BQ8IZU0 186 aa21.94■■□□□ 1.1
CPSF4-203ENST00000430038 DPF2Q92785 391 aa21.94■■□□□ 1.1
CPSF4-203ENST00000430038 CHMP4AQ9BY43 222 aa21.94■■□□□ 1.1
CPSF4-203ENST00000430038 ANKIB1Q9P2G1 1089 aa21.94■■□□□ 1.1
CPSF4-203ENST00000430038 UBE3BQ7Z3V4 1068 aa21.93■■□□□ 1.1
CPSF4-203ENST00000430038 ANKRD18AQ8IVF6 992 aa21.93■■□□□ 1.1
CPSF4-203ENST00000430038 WDR33Q9C0J8 1336 aaKnown RBP21.93■■□□□ 1.1
CPSF4-203ENST00000430038 WBP1LQ9NX94 342 aa21.93■■□□□ 1.1
CPSF4-203ENST00000430038 ZNF646O15015 1829 aaPredicted RBP21.92■■□□□ 1.1
CPSF4-203ENST00000430038 VIL1P09327 827 aaKnown RBP21.92■■□□□ 1.1
CPSF4-203ENST00000430038 GCKRQ14397 625 aa21.92■■□□□ 1.1
CPSF4-203ENST00000430038 TBC1D10BQ4KMP7 808 aaPredicted RBP21.92■■□□□ 1.1
CPSF4-203ENST00000430038 EYA3Q99504 573 aa21.92■■□□□ 1.1
CPSF4-203ENST00000430038 ZC3H12CQ9C0D7 883 aaKnown RBP21.92■■□□□ 1.1
CPSF4-203ENST00000430038 GGA1Q9UJY5 639 aa21.92■■□□□ 1.1
CPSF4-203ENST00000430038 HSP90B1P14625 803 aaKnown RBP21.91■■□□□ 1.1
CPSF4-203ENST00000430038 NEXNQ0ZGT2 675 aa21.91■■□□□ 1.1
CPSF4-203ENST00000430038 CYP4F22Q6NT55 531 aa21.91■■□□□ 1.1
CPSF4-203ENST00000430038 MINPP1Q9UNW1 487 aa21.91■■□□□ 1.1
CPSF4-203ENST00000430038 TLL2Q9Y6L7 1015 aa21.91■■□□□ 1.1
CPSF4-203ENST00000430038 ASTN2O75129 1339 aaPredicted RBP21.9■■□□□ 1.1
CPSF4-203ENST00000430038 F6X3S4 739 aa21.9■■□□□ 1.1
CPSF4-203ENST00000430038 H7C1D1 291 aa21.9■■□□□ 1.1
CPSF4-203ENST00000430038 CELF2O95319 508 aaKnown RBP21.9■■□□□ 1.1
CPSF4-203ENST00000430038 FKBP5Q13451 457 aaPredicted RBP21.9■■□□□ 1.1
CPSF4-203ENST00000430038 USP48Q86UV5 1035 aa21.9■■□□□ 1.1
CPSF4-203ENST00000430038 TNS4Q8IZW8 715 aa21.9■■□□□ 1.1
CPSF4-203ENST00000430038 ZC3H15Q8WU90 426 aaKnown RBP21.9■■□□□ 1.1
CPSF4-203ENST00000430038 DNAAF4Q8WXU2 420 aa21.9■■□□□ 1.1
CPSF4-203ENST00000430038 XDHP47989 1333 aa21.89■■□□□ 1.1
CPSF4-203ENST00000430038 RBM26Q5T8P6 1007 aaKnown RBP21.89■■□□□ 1.09
CPSF4-203ENST00000430038 BSDC1Q9NW68 430 aaPredicted RBP21.89■■□□□ 1.09
CPSF4-203ENST00000430038 THSD7BQ9C0I4 1608 aa21.88■■□□□ 1.09
CPSF4-203ENST00000430038 CSF1RP07333 972 aa21.88■■□□□ 1.09
CPSF4-203ENST00000430038 SAPCD2Q86UD0 394 aa21.88■■□□□ 1.09
CPSF4-203ENST00000430038 TXNRD3Q86VQ6 643 aa21.88■■□□□ 1.09
CPSF4-203ENST00000430038 CAPNS2Q96L46 248 aa21.88■■□□□ 1.09
CPSF4-203ENST00000430038 PLA2G12BQ9BX93 195 aa21.88■■□□□ 1.09
CPSF4-203ENST00000430038 CDC37L1Q7L3B6 337 aa21.87■■□□□ 1.09
CPSF4-203ENST00000430038 LINS1Q8NG48 757 aa21.87■■□□□ 1.09
CPSF4-203ENST00000430038 GMLQ99445 158 aa21.87■■□□□ 1.09
CPSF4-203ENST00000430038 ZNF521Q96K83 1311 aa21.86■■□□□ 1.09
CPSF4-203ENST00000430038 AOC2O75106 756 aa21.86■■□□□ 1.09
CPSF4-203ENST00000430038 ATP2B4P23634 1241 aa21.86■■□□□ 1.09
CPSF4-203ENST00000430038 RPS12P25398 132 aaKnown RBP21.86■■□□□ 1.09
CPSF4-203ENST00000430038 GRM1Q13255 1194 aa21.86■■□□□ 1.09
CPSF4-203ENST00000430038 FAM161AQ3B820 660 aa21.86■■□□□ 1.09
CPSF4-203ENST00000430038 BEND3Q5T5X7 828 aa21.86■■□□□ 1.09
CPSF4-203ENST00000430038 CDC5LQ99459 802 aaKnown RBP21.86■■□□□ 1.09
CPSF4-203ENST00000430038 ZNF408Q9H9D4 720 aa21.86■■□□□ 1.09
CPSF4-203ENST00000430038 ADM5C9JUS6 153 aa21.85■■□□□ 1.09
CPSF4-203ENST00000430038 ITGA6P23229 1130 aa21.85■■□□□ 1.09
CPSF4-203ENST00000430038 KLRK1P26718 216 aa21.85■■□□□ 1.09
CPSF4-203ENST00000430038 FOXO4P98177 505 aa21.85■■□□□ 1.09
CPSF4-203ENST00000430038 MXD3Q9BW11 206 aa21.85■■□□□ 1.09
CPSF4-203ENST00000430038 CAPN15O75808 1086 aa21.84■■□□□ 1.09
CPSF4-203ENST00000430038 CCT4P50991 539 aaKnown RBP21.84■■□□□ 1.09
CPSF4-203ENST00000430038 LBX1P52954 281 aa21.84■■□□□ 1.09
CPSF4-203ENST00000430038 EPHA10Q5JZY3 1008 aa21.84■■□□□ 1.09
CPSF4-203ENST00000430038 RSBN1LQ6PCB5 846 aaPredicted RBP21.84■■□□□ 1.09
CPSF4-203ENST00000430038 SNAP23O00161 211 aa21.83■■□□□ 1.09
CPSF4-203ENST00000430038 HSPA8P11142 646 aaKnown RBP21.83■■□□□ 1.09
CPSF4-203ENST00000430038 PAXIP1Q6ZW49 1069 aaPredicted RBP21.83■■□□□ 1.09
CPSF4-203ENST00000430038 ZIC5Q96T25 663 aa21.83■■□□□ 1.09
CPSF4-203ENST00000430038 A0A1B0GUL6 1792 aa21.83■■□□□ 1.09
CPSF4-203ENST00000430038 G3V3G9 751 aa21.82■■□□□ 1.08
CPSF4-203ENST00000430038 ZNF280AP59817 542 aaPredicted RBP21.82■■□□□ 1.08
CPSF4-203ENST00000430038 KIF4BQ2VIQ3 1234 aa21.82■■□□□ 1.08
CPSF4-203ENST00000430038 DCAF8Q5TAQ9 597 aa21.82■■□□□ 1.08
CPSF4-203ENST00000430038 ZNF609O15014 1411 aa21.81■■□□□ 1.08
CPSF4-203ENST00000430038 CTCFP49711 727 aaPredicted RBP21.81■■□□□ 1.08
CPSF4-203ENST00000430038 KRT26Q7Z3Y9 468 aa21.81■■□□□ 1.08
CPSF4-203ENST00000430038 PRDM10Q9NQV6 1147 aa21.81■■□□□ 1.08
CPSF4-203ENST00000430038 SCAF8Q9UPN6 1271 aaKnown RBP21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms