RNA–Protein interactions for RNA: ENST00000428683.5

ZNF3-208, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 999 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-208ENST00000428683 ECE2O60344 883 aa13.19□□□□□ -0.3
ZNF3-208ENST00000428683 RBM26Q5T8P6 1007 aaKnown RBP13.19□□□□□ -0.3
ZNF3-208ENST00000428683 SAMD7Q7Z3H4 446 aa13.19□□□□□ -0.3
ZNF3-208ENST00000428683 MICALL2Q8IY33 904 aa13.19□□□□□ -0.3
ZNF3-208ENST00000428683 FAM9BQ8IZU0 186 aa13.19□□□□□ -0.3
ZNF3-208ENST00000428683 GLIS2Q9BZE0 524 aaPredicted RBP13.19□□□□□ -0.3
ZNF3-208ENST00000428683 COL4A1P02462 1669 aa13.18□□□□□ -0.3
ZNF3-208ENST00000428683 IL16Q14005 1332 aa13.18□□□□□ -0.3
ZNF3-208ENST00000428683 WDR33Q9C0J8 1336 aaKnown RBP13.18□□□□□ -0.3
ZNF3-208ENST00000428683 ADAMTSL1Q8N6G6 1762 aa13.18□□□□□ -0.3
ZNF3-208ENST00000428683 UFL1O94874 794 aa13.18□□□□□ -0.3
ZNF3-208ENST00000428683 TBC1D10BQ4KMP7 808 aaPredicted RBP13.18□□□□□ -0.3
ZNF3-208ENST00000428683 ANKRD18AQ8IVF6 992 aa13.18□□□□□ -0.3
ZNF3-208ENST00000428683 ZNF408Q9H9D4 720 aa13.18□□□□□ -0.3
ZNF3-208ENST00000428683 GGA1Q9UJY5 639 aa13.18□□□□□ -0.3
ZNF3-208ENST00000428683 DDX60Q8IY21 1712 aaKnown RBP13.18□□□□□ -0.3
ZNF3-208ENST00000428683 CDHR2Q9BYE9 1310 aa13.17□□□□□ -0.3
ZNF3-208ENST00000428683 FANCIQ9NVI1 1328 aa13.17□□□□□ -0.3
ZNF3-208ENST00000428683 NEURL1BA8MQ27 555 aa13.17□□□□□ -0.3
ZNF3-208ENST00000428683 VAMP4O75379 141 aa13.17□□□□□ -0.3
ZNF3-208ENST00000428683 CELF2O95319 508 aaKnown RBP13.17□□□□□ -0.3
ZNF3-208ENST00000428683 EXOSC9Q06265 439 aaKnown RBP13.17□□□□□ -0.3
ZNF3-208ENST00000428683 CYP4F22Q6NT55 531 aa13.17□□□□□ -0.3
ZNF3-208ENST00000428683 DLK2Q6UY11 383 aa13.17□□□□□ -0.3
ZNF3-208ENST00000428683 USP48Q86UV5 1035 aa13.17□□□□□ -0.3
ZNF3-208ENST00000428683 WDR63Q8IWG1 891 aa13.17□□□□□ -0.3
ZNF3-208ENST00000428683 TTLL11Q8NHH1 800 aa13.17□□□□□ -0.3
ZNF3-208ENST00000428683 DPF2Q92785 391 aa13.17□□□□□ -0.3
ZNF3-208ENST00000428683 AIDAQ96BJ3 306 aa13.17□□□□□ -0.3
ZNF3-208ENST00000428683 PODXL2Q9NZ53 605 aa13.17□□□□□ -0.3
ZNF3-208ENST00000428683 PGAP2Q9UHJ9 254 aa13.17□□□□□ -0.3
ZNF3-208ENST00000428683 DUOX1Q9NRD9 1551 aa13.16□□□□□ -0.3
ZNF3-208ENST00000428683 WTIPA6NIX2 430 aaPredicted RBP13.16□□□□□ -0.3
ZNF3-208ENST00000428683 H7C1W4 665 aa13.16□□□□□ -0.3
ZNF3-208ENST00000428683 CTSWP56202 376 aa13.16□□□□□ -0.3
ZNF3-208ENST00000428683 FLIIQ13045 1269 aa13.16□□□□□ -0.3
ZNF3-208ENST00000428683 FKBP5Q13451 457 aaPredicted RBP13.16□□□□□ -0.3
ZNF3-208ENST00000428683 NCBP3Q53F19 620 aaKnown RBP13.16□□□□□ -0.3
ZNF3-208ENST00000428683 CDC37L1Q7L3B6 337 aa13.16□□□□□ -0.3
ZNF3-208ENST00000428683 UBE3BQ7Z3V4 1068 aa13.16□□□□□ -0.3
ZNF3-208ENST00000428683 ZC3H15Q8WU90 426 aaKnown RBP13.16□□□□□ -0.3
ZNF3-208ENST00000428683 GREM2Q9H772 168 aa13.16□□□□□ -0.3
ZNF3-208ENST00000428683 SPINK5Q9NQ38 1064 aaPredicted RBP13.16□□□□□ -0.3
ZNF3-208ENST00000428683 WBP1LQ9NX94 342 aa13.16□□□□□ -0.3
ZNF3-208ENST00000428683 EGFRP00533 1210 aa13.15□□□□□ -0.3
ZNF3-208ENST00000428683 CAPNS2Q96L46 248 aa13.15□□□□□ -0.3
ZNF3-208ENST00000428683 CDC5LQ99459 802 aaKnown RBP13.15□□□□□ -0.3
ZNF3-208ENST00000428683 TLL2Q9Y6L7 1015 aa13.15□□□□□ -0.3
ZNF3-208ENST00000428683 RTL9Q8NET4 1388 aa13.15□□□□□ -0.3
ZNF3-208ENST00000428683 XDHP47989 1333 aa13.14□□□□□ -0.31
ZNF3-208ENST00000428683 VIL1P09327 827 aaKnown RBP13.14□□□□□ -0.31
ZNF3-208ENST00000428683 ATP2B4P23634 1241 aa13.14□□□□□ -0.31
ZNF3-208ENST00000428683 CTCFP49711 727 aaPredicted RBP13.14□□□□□ -0.31
ZNF3-208ENST00000428683 LBX1P52954 281 aa13.14□□□□□ -0.31
ZNF3-208ENST00000428683 GCKRQ14397 625 aa13.14□□□□□ -0.31
ZNF3-208ENST00000428683 DNAAF4Q8WXU2 420 aa13.14□□□□□ -0.31
ZNF3-208ENST00000428683 MINPP1Q9UNW1 487 aa13.14□□□□□ -0.31
ZNF3-208ENST00000428683 AOC2O75106 756 aa13.13□□□□□ -0.31
ZNF3-208ENST00000428683 RPS12P25398 132 aaKnown RBP13.13□□□□□ -0.31
ZNF3-208ENST00000428683 ECE1P42892 770 aa13.13□□□□□ -0.31
ZNF3-208ENST00000428683 MAP2K1Q02750 393 aaPredicted RBP13.13□□□□□ -0.31
ZNF3-208ENST00000428683 SAPCD2Q86UD0 394 aa13.13□□□□□ -0.31
ZNF3-208ENST00000428683 BSDC1Q9NW68 430 aaPredicted RBP13.13□□□□□ -0.31
ZNF3-208ENST00000428683 PCNTO95613 3336 aa13.13□□□□□ -0.31
ZNF3-208ENST00000428683 F6X3S4 739 aa13.12□□□□□ -0.31
ZNF3-208ENST00000428683 IGHMBP2P38935 993 aaKnown RBP13.12□□□□□ -0.31
ZNF3-208ENST00000428683 DCPSQ96C86 337 aaKnown RBP13.12□□□□□ -0.31
ZNF3-208ENST00000428683 MYH16Q9H6N6 1097 aa13.12□□□□□ -0.31
ZNF3-208ENST00000428683 LRRC37AA6NMS7 1700 aa13.11□□□□□ -0.31
ZNF3-208ENST00000428683 ADM5C9JUS6 153 aa13.11□□□□□ -0.31
ZNF3-208ENST00000428683 ITGA6P23229 1130 aa13.11□□□□□ -0.31
ZNF3-208ENST00000428683 CCT4P50991 539 aaKnown RBP13.11□□□□□ -0.31
ZNF3-208ENST00000428683 CASP7P55210 303 aa13.11□□□□□ -0.31
ZNF3-208ENST00000428683 KIF4BQ2VIQ3 1234 aa13.11□□□□□ -0.31
ZNF3-208ENST00000428683 RSBN1LQ6PCB5 846 aaPredicted RBP13.11□□□□□ -0.31
ZNF3-208ENST00000428683 KRT26Q7Z3Y9 468 aa13.11□□□□□ -0.31
ZNF3-208ENST00000428683 LINS1Q8NG48 757 aa13.11□□□□□ -0.31
ZNF3-208ENST00000428683 FBXW7Q969H0 707 aa13.11□□□□□ -0.31
ZNF3-208ENST00000428683 PRDM10Q9NQV6 1147 aa13.11□□□□□ -0.31
ZNF3-208ENST00000428683 ASTN2O75129 1339 aaPredicted RBP13.11□□□□□ -0.31
ZNF3-208ENST00000428683 USP17L3A6NCW0 530 aa13.1□□□□□ -0.31
ZNF3-208ENST00000428683 USP17L4A6NCW7 530 aa13.1□□□□□ -0.31
ZNF3-208ENST00000428683 CSF1RP07333 972 aa13.1□□□□□ -0.31
ZNF3-208ENST00000428683 HSPA8P11142 646 aaKnown RBP13.1□□□□□ -0.31
ZNF3-208ENST00000428683 FAM161AQ3B820 660 aa13.1□□□□□ -0.31
ZNF3-208ENST00000428683 USP17L1Q7RTZ2 530 aa13.1□□□□□ -0.31
ZNF3-208ENST00000428683 PODNQ7Z5L7 613 aa13.1□□□□□ -0.31
ZNF3-208ENST00000428683 MPHOSPH8Q99549 860 aa13.1□□□□□ -0.31
ZNF3-208ENST00000428683 BEGAINQ9BUH8 593 aa13.1□□□□□ -0.31
ZNF3-208ENST00000428683 MXD3Q9BW11 206 aa13.1□□□□□ -0.31
ZNF3-208ENST00000428683 PLA2G12BQ9BX93 195 aa13.1□□□□□ -0.31
ZNF3-208ENST00000428683 HUNKP57058 714 aa13.09□□□□□ -0.31
ZNF3-208ENST00000428683 SCARF1Q14162 830 aa13.09□□□□□ -0.31
ZNF3-208ENST00000428683 BEND3Q5T5X7 828 aa13.09□□□□□ -0.31
ZNF3-208ENST00000428683 TXNRD3Q86VQ6 643 aa13.09□□□□□ -0.31
ZNF3-208ENST00000428683 AGBL3Q8NEM8 1001 aa13.09□□□□□ -0.31
ZNF3-208ENST00000428683 TSKSQ9UJT2 592 aa13.09□□□□□ -0.31
ZNF3-208ENST00000428683 CHMP3Q9Y3E7 222 aa13.09□□□□□ -0.31
ZNF3-208ENST00000428683 ANKRD18BA2A2Z9 1011 aa13.08□□□□□ -0.32
ZNF3-208ENST00000428683 USP17L8P0C7I0 530 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 269.1 ms