RNA–Protein interactions for RNA: ENST00000425430.5

HDAC11-210, Transcript of histone deacetylase 11, humanhuman

TSL 2

Gene HDAC11, Length 1,021 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-210ENST00000425430 ZIC5Q96T25 663 aa19.72■□□□□ 0.75
HDAC11-210ENST00000425430 ATP5J2-PTCD1G3V325 749 aa19.71■□□□□ 0.75
HDAC11-210ENST00000425430 ECE2O60344 883 aa19.71■□□□□ 0.75
HDAC11-210ENST00000425430 RBM26Q5T8P6 1007 aaKnown RBP19.71■□□□□ 0.75
HDAC11-210ENST00000425430 TSPYL6Q8N831 410 aa19.71■□□□□ 0.75
HDAC11-210ENST00000425430 PLBD2Q8NHP8 589 aa19.71■□□□□ 0.75
HDAC11-210ENST00000425430 DPF2Q92785 391 aa19.71■□□□□ 0.75
HDAC11-210ENST00000425430 ADM5C9JUS6 153 aa19.7■□□□□ 0.74
HDAC11-210ENST00000425430 EGFRP00533 1210 aa19.7■□□□□ 0.74
HDAC11-210ENST00000425430 HOXB7P09629 217 aa19.7■□□□□ 0.74
HDAC11-210ENST00000425430 GPSM2P81274 684 aa19.7■□□□□ 0.74
HDAC11-210ENST00000425430 DOK7Q18PE1 504 aa19.7■□□□□ 0.74
HDAC11-210ENST00000425430 RGS19P49795 217 aa19.69■□□□□ 0.74
HDAC11-210ENST00000425430 CALD1Q05682 793 aaKnown RBP19.69■□□□□ 0.74
HDAC11-210ENST00000425430 EYA3Q99504 573 aa19.69■□□□□ 0.74
HDAC11-210ENST00000425430 ISCA1Q9BUE6 129 aa19.69■□□□□ 0.74
HDAC11-210ENST00000425430 GBA2Q9HCG7 927 aaPredicted RBP19.69■□□□□ 0.74
HDAC11-210ENST00000425430 POLLQ9UGP5 575 aa19.69■□□□□ 0.74
HDAC11-210ENST00000425430 POLR2AP24928 1970 aaKnown RBP19.69■□□□□ 0.74
HDAC11-210ENST00000425430 RPS12P25398 132 aaKnown RBP19.68■□□□□ 0.74
HDAC11-210ENST00000425430 SF3B3Q15393 1217 aaKnown RBP19.68■□□□□ 0.74
HDAC11-210ENST00000425430 RGMBQ6NW40 437 aa19.68■□□□□ 0.74
HDAC11-210ENST00000425430 ANKRD13DQ6ZTN6 518 aa19.68■□□□□ 0.74
HDAC11-210ENST00000425430 C2orf69Q8N8R5 385 aa19.68■□□□□ 0.74
HDAC11-210ENST00000425430 DCPSQ96C86 337 aaKnown RBP19.68■□□□□ 0.74
HDAC11-210ENST00000425430 RTL9Q8NET4 1388 aa19.68■□□□□ 0.74
HDAC11-210ENST00000425430 KIF4BQ2VIQ3 1234 aa19.67■□□□□ 0.74
HDAC11-210ENST00000425430 KCNQ5Q9NR82 932 aa19.67■□□□□ 0.74
HDAC11-210ENST00000425430 DBF4Q9UBU7 674 aaPredicted RBP19.67■□□□□ 0.74
HDAC11-210ENST00000425430 SCN9AQ15858 1988 aa19.66■□□□□ 0.74
HDAC11-210ENST00000425430 IRS4O14654 1257 aaPredicted RBP19.66■□□□□ 0.74
HDAC11-210ENST00000425430 TBC1D16Q8TBP0 767 aa19.66■□□□□ 0.74
HDAC11-210ENST00000425430 SPINK5Q9NQ38 1064 aaPredicted RBP19.66■□□□□ 0.74
HDAC11-210ENST00000425430 GGA3Q9NZ52 723 aa19.66■□□□□ 0.74
HDAC11-210ENST00000425430 FAM155AB1AL88 458 aaPredicted RBP19.65■□□□□ 0.74
HDAC11-210ENST00000425430 G3V3G9 751 aa19.65■□□□□ 0.74
HDAC11-210ENST00000425430 ZNF157P51786 506 aaPredicted RBP19.65■□□□□ 0.74
HDAC11-210ENST00000425430 NCBP3Q53F19 620 aaKnown RBP19.65■□□□□ 0.74
HDAC11-210ENST00000425430 DCAF8Q5TAQ9 597 aa19.65■□□□□ 0.74
HDAC11-210ENST00000425430 PHAXQ9H814 394 aaKnown RBP19.65■□□□□ 0.74
HDAC11-210ENST00000425430 KIF23Q02241 960 aaPredicted RBP19.64■□□□□ 0.73
HDAC11-210ENST00000425430 SULF1Q8IWU6 871 aa19.64■□□□□ 0.73
HDAC11-210ENST00000425430 CCDC102AQ96A19 550 aa19.64■□□□□ 0.73
HDAC11-210ENST00000425430 ZC3H12CQ9C0D7 883 aaKnown RBP19.64■□□□□ 0.73
HDAC11-210ENST00000425430 HYPKQ9NX55 129 aa19.64■□□□□ 0.73
HDAC11-210ENST00000425430 AKAP11Q9UKA4 1901 aa19.63■□□□□ 0.73
HDAC11-210ENST00000425430 ASTN2O75129 1339 aaPredicted RBP19.63■□□□□ 0.73
HDAC11-210ENST00000425430 IL16Q14005 1332 aa19.63■□□□□ 0.73
HDAC11-210ENST00000425430 UFL1O94874 794 aa19.63■□□□□ 0.73
HDAC11-210ENST00000425430 RPS8P62241 208 aaKnown RBP19.63■□□□□ 0.73
HDAC11-210ENST00000425430 ANKIB1Q9P2G1 1089 aa19.63■□□□□ 0.73
HDAC11-210ENST00000425430 FANCIQ9NVI1 1328 aa19.62■□□□□ 0.73
HDAC11-210ENST00000425430 GOLGA2Q08379 1002 aa19.62■□□□□ 0.73
HDAC11-210ENST00000425430 SEC31BQ9NQW1 1179 aa19.62■□□□□ 0.73
HDAC11-210ENST00000425430 SAGE1Q9NXZ1 904 aa19.62■□□□□ 0.73
HDAC11-210ENST00000425430 TRPA1O75762 1119 aa19.61■□□□□ 0.73
HDAC11-210ENST00000425430 RIC3Q7Z5B4 369 aa19.61■□□□□ 0.73
HDAC11-210ENST00000425430 CDCA5Q96FF9 252 aa19.61■□□□□ 0.73
HDAC11-210ENST00000425430 GGA1Q9UJY5 639 aa19.61■□□□□ 0.73
HDAC11-210ENST00000425430 SLC10A3P09131 477 aa19.6■□□□□ 0.73
HDAC11-210ENST00000425430 VIL1P09327 827 aaKnown RBP19.6■□□□□ 0.73
HDAC11-210ENST00000425430 WDR63Q8IWG1 891 aa19.6■□□□□ 0.73
HDAC11-210ENST00000425430 PSME4Q14997 1843 aa19.6■□□□□ 0.73
HDAC11-210ENST00000425430 SOX10P56693 466 aa19.59■□□□□ 0.73
HDAC11-210ENST00000425430 TRIM28Q13263 835 aaKnown RBP19.59■□□□□ 0.73
HDAC11-210ENST00000425430 ANGEL2Q5VTE6 544 aaKnown RBP19.59■□□□□ 0.73
HDAC11-210ENST00000425430 ZBTB38Q8NAP3 1195 aaPredicted RBP19.59■□□□□ 0.73
HDAC11-210ENST00000425430 CCDC85AQ96PX6 553 aaPredicted RBP19.59■□□□□ 0.73
HDAC11-210ENST00000425430 RNF186Q9NXI6 227 aa19.59■□□□□ 0.73
HDAC11-210ENST00000425430 PODXL2Q9NZ53 605 aa19.59■□□□□ 0.73
HDAC11-210ENST00000425430 ZNF521Q96K83 1311 aa19.58■□□□□ 0.73
HDAC11-210ENST00000425430 HSP90B1P14625 803 aaKnown RBP19.58■□□□□ 0.72
HDAC11-210ENST00000425430 TWISTNBQ3B726 338 aaPredicted RBP19.58■□□□□ 0.72
HDAC11-210ENST00000425430 CCDC152Q4G0S7 254 aa19.58■□□□□ 0.72
HDAC11-210ENST00000425430 RSBN1LQ6PCB5 846 aaPredicted RBP19.58■□□□□ 0.72
HDAC11-210ENST00000425430 MYD88Q99836 296 aa19.58■□□□□ 0.72
HDAC11-210ENST00000425430 PAPPA2Q9BXP8 1791 aa19.57■□□□□ 0.72
HDAC11-210ENST00000425430 CCDC30Q5VVM6 783 aa19.57■□□□□ 0.72
HDAC11-210ENST00000425430 RASAL3Q86YV0 1011 aa19.57■□□□□ 0.72
HDAC11-210ENST00000425430 EXOSC9Q06265 439 aaKnown RBP19.56■□□□□ 0.72
HDAC11-210ENST00000425430 SCARF1Q14162 830 aa19.56■□□□□ 0.72
HDAC11-210ENST00000425430 G2E3Q7L622 706 aa19.56■□□□□ 0.72
HDAC11-210ENST00000425430 JARID2Q92833 1246 aaPredicted RBP19.56■□□□□ 0.72
HDAC11-210ENST00000425430 ZNF609O15014 1411 aa19.56■□□□□ 0.72
HDAC11-210ENST00000425430 SPEF2Q9C093 1822 aa19.55■□□□□ 0.72
HDAC11-210ENST00000425430 ZNF280AP59817 542 aaPredicted RBP19.55■□□□□ 0.72
HDAC11-210ENST00000425430 AGBL3Q8NEM8 1001 aa19.55■□□□□ 0.72
HDAC11-210ENST00000425430 CSRNP1Q96S65 589 aa19.55■□□□□ 0.72
HDAC11-210ENST00000425430 XDHP47989 1333 aa19.54■□□□□ 0.72
HDAC11-210ENST00000425430 PDE8AO60658 829 aa19.54■□□□□ 0.72
HDAC11-210ENST00000425430 VAMP4O75379 141 aa19.54■□□□□ 0.72
HDAC11-210ENST00000425430 PCCAP05165 728 aaPredicted RBP19.54■□□□□ 0.72
HDAC11-210ENST00000425430 ANKRD18AQ8IVF6 992 aa19.54■□□□□ 0.72
HDAC11-210ENST00000425430 MYOZ2Q9NPC6 264 aa19.54■□□□□ 0.72
HDAC11-210ENST00000425430 CWC25Q9NXE8 425 aaPredicted RBP19.54■□□□□ 0.72
HDAC11-210ENST00000425430 SCAF8Q9UPN6 1271 aaKnown RBP19.54■□□□□ 0.72
HDAC11-210ENST00000425430 CCER2I3L3R5 266 aa19.53■□□□□ 0.72
HDAC11-210ENST00000425430 TNRC18O15417 2968 aaPredicted RBP19.53■□□□□ 0.72
HDAC11-210ENST00000425430 USP17L8P0C7I0 530 aa19.53■□□□□ 0.72
HDAC11-210ENST00000425430 CCDC191Q8NCU4 936 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms