RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 AIDAQ96BJ3 306 aa22.81■■□□□ 1.24
GPC1-203ENST00000425056 TLL2Q9Y6L7 1015 aa22.81■■□□□ 1.24
GPC1-203ENST00000425056 CACNA1FO60840 1977 aa22.8■■□□□ 1.24
GPC1-203ENST00000425056 H7C1D1 291 aa22.8■■□□□ 1.24
GPC1-203ENST00000425056 IGKV5-2P06315 115 aa22.8■■□□□ 1.24
GPC1-203ENST00000425056 JARID2Q92833 1246 aaPredicted RBP22.8■■□□□ 1.24
GPC1-203ENST00000425056 GLIS2Q9BZE0 524 aaPredicted RBP22.8■■□□□ 1.24
GPC1-203ENST00000425056 MRS2Q9HD23 443 aa22.8■■□□□ 1.24
GPC1-203ENST00000425056 ZBTB12Q9Y330 459 aaPredicted RBP22.8■■□□□ 1.24
GPC1-203ENST00000425056 UFL1O94874 794 aa22.79■■□□□ 1.24
GPC1-203ENST00000425056 RPS12P25398 132 aaKnown RBP22.79■■□□□ 1.24
GPC1-203ENST00000425056 CTCFP49711 727 aaPredicted RBP22.79■■□□□ 1.24
GPC1-203ENST00000425056 GPR101Q96P66 508 aaPredicted RBP22.79■■□□□ 1.24
GPC1-203ENST00000425056 PRDM10Q9NQV6 1147 aa22.79■■□□□ 1.24
GPC1-203ENST00000425056 SPEF2Q9C093 1822 aa22.78■■□□□ 1.24
GPC1-203ENST00000425056 CTSWP56202 376 aa22.78■■□□□ 1.24
GPC1-203ENST00000425056 DOK7Q18PE1 504 aa22.78■■□□□ 1.24
GPC1-203ENST00000425056 CAPNS2Q96L46 248 aa22.78■■□□□ 1.24
GPC1-203ENST00000425056 ANKIB1Q9P2G1 1089 aa22.78■■□□□ 1.24
GPC1-203ENST00000425056 GGA1Q9UJY5 639 aa22.78■■□□□ 1.24
GPC1-203ENST00000425056 ZNF609O15014 1411 aa22.77■■□□□ 1.24
GPC1-203ENST00000425056 ECE1P42892 770 aa22.77■■□□□ 1.24
GPC1-203ENST00000425056 MAP2K1Q02750 393 aaPredicted RBP22.77■■□□□ 1.24
GPC1-203ENST00000425056 NEXNQ0ZGT2 675 aa22.77■■□□□ 1.24
GPC1-203ENST00000425056 ANKRD18AQ8IVF6 992 aa22.77■■□□□ 1.24
GPC1-203ENST00000425056 CCDC85AQ96PX6 553 aaPredicted RBP22.77■■□□□ 1.24
GPC1-203ENST00000425056 ZC3H12CQ9C0D7 883 aaKnown RBP22.77■■□□□ 1.24
GPC1-203ENST00000425056 FANCIQ9NVI1 1328 aa22.77■■□□□ 1.24
GPC1-203ENST00000425056 NEURL1BA8MQ27 555 aa22.76■■□□□ 1.23
GPC1-203ENST00000425056 CELF2O95319 508 aaKnown RBP22.76■■□□□ 1.23
GPC1-203ENST00000425056 CDC37L1Q7L3B6 337 aa22.76■■□□□ 1.23
GPC1-203ENST00000425056 G2E3Q7L622 706 aa22.76■■□□□ 1.23
GPC1-203ENST00000425056 KCNQ5Q9NR82 932 aa22.76■■□□□ 1.23
GPC1-203ENST00000425056 XDHP47989 1333 aa22.76■■□□□ 1.23
GPC1-203ENST00000425056 ANP32CO43423 234 aa22.75■■□□□ 1.23
GPC1-203ENST00000425056 SLC4A2P04920 1241 aa22.75■■□□□ 1.23
GPC1-203ENST00000425056 CWF19L2Q2TBE0 894 aaKnown RBP22.75■■□□□ 1.23
GPC1-203ENST00000425056 CYP4F22Q6NT55 531 aa22.75■■□□□ 1.23
GPC1-203ENST00000425056 PAXIP1Q6ZW49 1069 aaPredicted RBP22.75■■□□□ 1.23
GPC1-203ENST00000425056 SAMD7Q7Z3H4 446 aa22.75■■□□□ 1.23
GPC1-203ENST00000425056 SAPCD2Q86UD0 394 aa22.75■■□□□ 1.23
GPC1-203ENST00000425056 CDC5LQ99459 802 aaKnown RBP22.75■■□□□ 1.23
GPC1-203ENST00000425056 EGFRP00533 1210 aa22.74■■□□□ 1.23
GPC1-203ENST00000425056 VIL1P09327 827 aaKnown RBP22.74■■□□□ 1.23
GPC1-203ENST00000425056 TTLL11Q8NHH1 800 aa22.74■■□□□ 1.23
GPC1-203ENST00000425056 HHIPL1Q96JK4 782 aa22.74■■□□□ 1.23
GPC1-203ENST00000425056 ZNF316A6NFI3 1004 aaPredicted RBP22.73■■□□□ 1.23
GPC1-203ENST00000425056 FLIIQ13045 1269 aa22.73■■□□□ 1.23
GPC1-203ENST00000425056 POLR2AP24928 1970 aaKnown RBP22.72■■□□□ 1.23
GPC1-203ENST00000425056 CAPN15O75808 1086 aa22.72■■□□□ 1.23
GPC1-203ENST00000425056 HSPA8P11142 646 aaKnown RBP22.72■■□□□ 1.23
GPC1-203ENST00000425056 TBC1D10BQ4KMP7 808 aaPredicted RBP22.72■■□□□ 1.23
GPC1-203ENST00000425056 WDR63Q8IWG1 891 aa22.72■■□□□ 1.23
GPC1-203ENST00000425056 GREM2Q9H772 168 aa22.72■■□□□ 1.23
GPC1-203ENST00000425056 G3V3G9 751 aa22.71■■□□□ 1.23
GPC1-203ENST00000425056 H7C1W4 665 aa22.71■■□□□ 1.23
GPC1-203ENST00000425056 ATP2B4P23634 1241 aa22.71■■□□□ 1.23
GPC1-203ENST00000425056 LBX1P52954 281 aa22.71■■□□□ 1.23
GPC1-203ENST00000425056 DCAF8Q5TAQ9 597 aa22.71■■□□□ 1.23
GPC1-203ENST00000425056 UBE3BQ7Z3V4 1068 aa22.71■■□□□ 1.23
GPC1-203ENST00000425056 ZNF408Q9H9D4 720 aa22.71■■□□□ 1.23
GPC1-203ENST00000425056 BSDC1Q9NW68 430 aaPredicted RBP22.71■■□□□ 1.23
GPC1-203ENST00000425056 ZNF646O15015 1829 aaPredicted RBP22.71■■□□□ 1.23
GPC1-203ENST00000425056 GRM1Q13255 1194 aa22.7■■□□□ 1.22
GPC1-203ENST00000425056 MED23Q9ULK4 1368 aa22.7■■□□□ 1.22
GPC1-203ENST00000425056 MAP2K2P36507 400 aa22.69■■□□□ 1.22
GPC1-203ENST00000425056 GCKRQ14397 625 aa22.69■■□□□ 1.22
GPC1-203ENST00000425056 KIF4BQ2VIQ3 1234 aa22.69■■□□□ 1.22
GPC1-203ENST00000425056 KRT26Q7Z3Y9 468 aa22.69■■□□□ 1.22
GPC1-203ENST00000425056 USP48Q86UV5 1035 aa22.69■■□□□ 1.22
GPC1-203ENST00000425056 PLA2G12BQ9BX93 195 aa22.69■■□□□ 1.22
GPC1-203ENST00000425056 VAMP4O75379 141 aa22.68■■□□□ 1.22
GPC1-203ENST00000425056 CASP7P55210 303 aa22.68■■□□□ 1.22
GPC1-203ENST00000425056 FKBP5Q13451 457 aaPredicted RBP22.68■■□□□ 1.22
GPC1-203ENST00000425056 RSBN1LQ6PCB5 846 aaPredicted RBP22.68■■□□□ 1.22
GPC1-203ENST00000425056 AGBL3Q8NEM8 1001 aa22.68■■□□□ 1.22
GPC1-203ENST00000425056 DNAAF4Q8WXU2 420 aa22.68■■□□□ 1.22
GPC1-203ENST00000425056 MINPP1Q9UNW1 487 aa22.68■■□□□ 1.22
GPC1-203ENST00000425056 AOC2O75106 756 aa22.67■■□□□ 1.22
GPC1-203ENST00000425056 ZNF280AP59817 542 aaPredicted RBP22.67■■□□□ 1.22
GPC1-203ENST00000425056 PODNQ7Z5L7 613 aa22.67■■□□□ 1.22
GPC1-203ENST00000425056 LINS1Q8NG48 757 aa22.67■■□□□ 1.22
GPC1-203ENST00000425056 DCPSQ96C86 337 aaKnown RBP22.67■■□□□ 1.22
GPC1-203ENST00000425056 MYH16Q9H6N6 1097 aa22.67■■□□□ 1.22
GPC1-203ENST00000425056 EXOSC9Q06265 439 aaKnown RBP22.66■■□□□ 1.22
GPC1-203ENST00000425056 RBM26Q5T8P6 1007 aaKnown RBP22.66■■□□□ 1.22
GPC1-203ENST00000425056 GMLQ99445 158 aa22.66■■□□□ 1.22
GPC1-203ENST00000425056 BEGAINQ9BUH8 593 aa22.66■■□□□ 1.22
GPC1-203ENST00000425056 GGA3Q9NZ52 723 aa22.66■■□□□ 1.22
GPC1-203ENST00000425056 SALL2Q9Y467 1007 aaPredicted RBP22.66■■□□□ 1.22
GPC1-203ENST00000425056 ADM5C9JUS6 153 aa22.65■■□□□ 1.22
GPC1-203ENST00000425056 DLK2Q6UY11 383 aa22.65■■□□□ 1.22
GPC1-203ENST00000425056 USP17L3A6NCW0 530 aa22.64■■□□□ 1.21
GPC1-203ENST00000425056 USP17L4A6NCW7 530 aa22.64■■□□□ 1.21
GPC1-203ENST00000425056 WTIPA6NIX2 430 aaPredicted RBP22.64■■□□□ 1.21
GPC1-203ENST00000425056 IGHMBP2P38935 993 aaKnown RBP22.64■■□□□ 1.21
GPC1-203ENST00000425056 CCT4P50991 539 aaKnown RBP22.64■■□□□ 1.21
GPC1-203ENST00000425056 FAM161AQ3B820 660 aa22.64■■□□□ 1.21
GPC1-203ENST00000425056 USP17L1Q7RTZ2 530 aa22.64■■□□□ 1.21
GPC1-203ENST00000425056 A0A1B0GUL6 1792 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms