RNA–Protein interactions for RNA: ENST00000424964.6

TMEM248-204, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-204ENST00000424964 COG6Q9Y2V7 657 aa18.54■□□□□ 0.56
TMEM248-204ENST00000424964 LRRC37AA6NMS7 1700 aa18.54■□□□□ 0.56
TMEM248-204ENST00000424964 ZBTB7BO15156 539 aaPredicted RBP18.53■□□□□ 0.56
TMEM248-204ENST00000424964 PDE3AQ14432 1141 aa18.53■□□□□ 0.56
TMEM248-204ENST00000424964 PPIP5K2O43314 1243 aa18.52■□□□□ 0.56
TMEM248-204ENST00000424964 MVPQ14764 893 aaKnown RBP18.52■□□□□ 0.56
TMEM248-204ENST00000424964 C20orf194Q5TEA3 1177 aa18.52■□□□□ 0.56
TMEM248-204ENST00000424964 LARGE2Q8N3Y3 721 aa18.52■□□□□ 0.56
TMEM248-204ENST00000424964 RTFDC1Q9BY42 306 aaPredicted RBP18.52■□□□□ 0.56
TMEM248-204ENST00000424964 GGA1Q9UJY5 639 aa18.52■□□□□ 0.56
TMEM248-204ENST00000424964 XDHP47989 1333 aa18.51■□□□□ 0.55
TMEM248-204ENST00000424964 DICER1Q9UPY3 1922 aaKnown RBP18.51■□□□□ 0.55
TMEM248-204ENST00000424964 UFL1O94874 794 aa18.51■□□□□ 0.55
TMEM248-204ENST00000424964 AOC3Q16853 763 aa18.51■□□□□ 0.55
TMEM248-204ENST00000424964 TBC1D16Q8TBP0 767 aa18.51■□□□□ 0.55
TMEM248-204ENST00000424964 ANKRD2Q9GZV1 360 aa18.51■□□□□ 0.55
TMEM248-204ENST00000424964 PODXL2Q9NZ53 605 aa18.51■□□□□ 0.55
TMEM248-204ENST00000424964 POLLQ9UGP5 575 aa18.51■□□□□ 0.55
TMEM248-204ENST00000424964 DDX19BQ9UMR2 479 aa18.51■□□□□ 0.55
TMEM248-204ENST00000424964 ATP2B4P23634 1241 aa18.5■□□□□ 0.55
TMEM248-204ENST00000424964 RRP1P56182 461 aaKnown RBP18.5■□□□□ 0.55
TMEM248-204ENST00000424964 CHRNDQ07001 517 aa18.5■□□□□ 0.55
TMEM248-204ENST00000424964 KLHDC4Q8TBB5 520 aa18.5■□□□□ 0.55
TMEM248-204ENST00000424964 JDP2Q8WYK2 163 aa18.5■□□□□ 0.55
TMEM248-204ENST00000424964 EYA3Q99504 573 aa18.5■□□□□ 0.55
TMEM248-204ENST00000424964 VPS33BQ9H267 617 aa18.5■□□□□ 0.55
TMEM248-204ENST00000424964 C1orf115Q9H7X2 142 aa18.5■□□□□ 0.55
TMEM248-204ENST00000424964 RIMBP2O15034 1052 aa18.49■□□□□ 0.55
TMEM248-204ENST00000424964 WASHC4Q2M389 1173 aa18.49■□□□□ 0.55
TMEM248-204ENST00000424964 HELBQ8NG08 1087 aaPredicted RBP18.49■□□□□ 0.55
TMEM248-204ENST00000424964 GPR101Q96P66 508 aaPredicted RBP18.49■□□□□ 0.55
TMEM248-204ENST00000424964 PUS3Q9BZE2 481 aaKnown RBP18.49■□□□□ 0.55
TMEM248-204ENST00000424964 SRGAP3O43295 1099 aa18.48■□□□□ 0.55
TMEM248-204ENST00000424964 KCNJ4P48050 445 aa18.48■□□□□ 0.55
TMEM248-204ENST00000424964 RFX5P48382 616 aaPredicted RBP18.48■□□□□ 0.55
TMEM248-204ENST00000424964 KIAA2012Q0VF49 1180 aa18.48■□□□□ 0.55
TMEM248-204ENST00000424964 NIM1KQ8IY84 436 aa18.48■□□□□ 0.55
TMEM248-204ENST00000424964 ZNF526Q8TF50 670 aaPredicted RBP18.48■□□□□ 0.55
TMEM248-204ENST00000424964 ZC3H12CQ9C0D7 883 aaKnown RBP18.48■□□□□ 0.55
TMEM248-204ENST00000424964 CHMP4BQ9H444 224 aaKnown RBP18.48■□□□□ 0.55
TMEM248-204ENST00000424964 ZC3H4Q9UPT8 1303 aaKnown RBP18.48■□□□□ 0.55
TMEM248-204ENST00000424964 DUOX1Q9NRD9 1551 aa18.47■□□□□ 0.55
TMEM248-204ENST00000424964 G3V3G9 751 aa18.47■□□□□ 0.55
TMEM248-204ENST00000424964 TAF5LO75529 589 aa18.47■□□□□ 0.55
TMEM248-204ENST00000424964 PTPN12Q05209 780 aaKnown RBP18.47■□□□□ 0.55
TMEM248-204ENST00000424964 LRRC24Q50LG9 513 aa18.47■□□□□ 0.55
TMEM248-204ENST00000424964 DCAF8Q5TAQ9 597 aa18.47■□□□□ 0.55
TMEM248-204ENST00000424964 LEMD3Q9Y2U8 911 aa18.47■□□□□ 0.55
TMEM248-204ENST00000424964 TIAM2Q8IVF5 1701 aa18.46■□□□□ 0.55
TMEM248-204ENST00000424964 WTIPA6NIX2 430 aaPredicted RBP18.46■□□□□ 0.55
TMEM248-204ENST00000424964 MTX1Q13505 466 aa18.46■□□□□ 0.55
TMEM248-204ENST00000424964 DPY19L2Q6NUT2 758 aa18.46■□□□□ 0.55
TMEM248-204ENST00000424964 SIL1Q9H173 461 aa18.46■□□□□ 0.55
TMEM248-204ENST00000424964 RIPOR2Q9Y4F9 1068 aa18.46■□□□□ 0.55
TMEM248-204ENST00000424964 LTBP1Q14766 1721 aa18.46■□□□□ 0.55
TMEM248-204ENST00000424964 EYA2O00167 538 aa18.45■□□□□ 0.54
TMEM248-204ENST00000424964 ATP8B2P98198 1209 aa18.45■□□□□ 0.54
TMEM248-204ENST00000424964 METTL24Q5JXM2 366 aa18.45■□□□□ 0.54
TMEM248-204ENST00000424964 PA2G4Q9UQ80 394 aaKnown RBP18.45■□□□□ 0.54
TMEM248-204ENST00000424964 ZNF804BA4D1E1 1349 aa18.45■□□□□ 0.54
TMEM248-204ENST00000424964 MROH5Q6ZUA9 1318 aa18.45■□□□□ 0.54
TMEM248-204ENST00000424964 PNMA6EA0A0J9YXQ4 647 aa18.44■□□□□ 0.54
TMEM248-204ENST00000424964 EIF6P56537 245 aaKnown RBP18.44■□□□□ 0.54
TMEM248-204ENST00000424964 DOK7Q18PE1 504 aa18.44■□□□□ 0.54
TMEM248-204ENST00000424964 ZNF784Q8NCA9 323 aaPredicted RBP18.44■□□□□ 0.54
TMEM248-204ENST00000424964 ZBTB40Q9NUA8 1239 aa18.44■□□□□ 0.54
TMEM248-204ENST00000424964 FZD9O00144 591 aa18.43■□□□□ 0.54
TMEM248-204ENST00000424964 SNAP23O00161 211 aa18.43■□□□□ 0.54
TMEM248-204ENST00000424964 DBNDD1Q9H9R9 158 aa18.43■□□□□ 0.54
TMEM248-204ENST00000424964 COPRSQ9NQ92 184 aa18.43■□□□□ 0.54
TMEM248-204ENST00000424964 FBXO3Q9UK99 471 aa18.43■□□□□ 0.54
TMEM248-204ENST00000424964 ZNRF3Q9ULT6 936 aa18.43■□□□□ 0.54
TMEM248-204ENST00000424964 SUPT16HQ9Y5B9 1047 aaKnown RBP18.43■□□□□ 0.54
TMEM248-204ENST00000424964 COL4A5P29400 1685 aa18.43■□□□□ 0.54
TMEM248-204ENST00000424964 KDM2BQ8NHM5 1336 aa18.43■□□□□ 0.54
TMEM248-204ENST00000424964 GLTPD2A6NH11 291 aa18.42■□□□□ 0.54
TMEM248-204ENST00000424964 CIAO1O76071 339 aa18.42■□□□□ 0.54
TMEM248-204ENST00000424964 GPBP1L1Q9HC44 474 aaPredicted RBP18.42■□□□□ 0.54
TMEM248-204ENST00000424964 A0A1B0GUL6 1792 aa18.41■□□□□ 0.54
TMEM248-204ENST00000424964 ECE2O60344 883 aa18.41■□□□□ 0.54
TMEM248-204ENST00000424964 DDNO94850 711 aaPredicted RBP18.41■□□□□ 0.54
TMEM248-204ENST00000424964 CEP85Q6P2H3 762 aa18.41■□□□□ 0.54
TMEM248-204ENST00000424964 ATG9AQ7Z3C6 839 aa18.41■□□□□ 0.54
TMEM248-204ENST00000424964 ZNF541Q9H0D2 1346 aa18.41■□□□□ 0.54
TMEM248-204ENST00000424964 MED23Q9ULK4 1368 aa18.41■□□□□ 0.54
TMEM248-204ENST00000424964 PDE8BO95263 885 aa18.4■□□□□ 0.54
TMEM248-204ENST00000424964 IL15P40933 162 aaPredicted RBP18.4■□□□□ 0.54
TMEM248-204ENST00000424964 UBE4AQ14139 1066 aa18.4■□□□□ 0.54
TMEM248-204ENST00000424964 POLA2Q14181 598 aa18.4■□□□□ 0.54
TMEM248-204ENST00000424964 SSH3Q8TE77 659 aa18.4■□□□□ 0.54
TMEM248-204ENST00000424964 CEP126Q9P2H0 1117 aa18.4■□□□□ 0.54
TMEM248-204ENST00000424964 GJA3Q9Y6H8 435 aa18.4■□□□□ 0.54
TMEM248-204ENST00000424964 YDJCA8MPS7 323 aa18.39■□□□□ 0.53
TMEM248-204ENST00000424964 RAD17O75943 681 aa18.39■□□□□ 0.53
TMEM248-204ENST00000424964 KLRK1P26718 216 aa18.39■□□□□ 0.53
TMEM248-204ENST00000424964 G3BP1Q13283 466 aaKnown RBP eCLIP18.39■□□□□ 0.53
TMEM248-204ENST00000424964 TXNRD3Q86VQ6 643 aa18.39■□□□□ 0.53
TMEM248-204ENST00000424964 CRBNQ96SW2 442 aa18.39■□□□□ 0.53
TMEM248-204ENST00000424964 CXCL9Q07325 125 aa18.38■□□□□ 0.53
TMEM248-204ENST00000424964 TNIP1Q15025 636 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms