RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 FPGT-TNNI3KV9GXZ4 949 aa17.88■□□□□ 0.45
C9orf3-204ENST00000424143 SPEF2Q9C093 1822 aa17.88■□□□□ 0.45
C9orf3-204ENST00000424143 GSDMDP57764 484 aa17.87■□□□□ 0.45
C9orf3-204ENST00000424143 Q6ZUG5 572 aa17.87■□□□□ 0.45
C9orf3-204ENST00000424143 DHX32Q7L7V1 743 aaKnown RBP17.87■□□□□ 0.45
C9orf3-204ENST00000424143 CCDC112Q8NEF3 446 aa17.87■□□□□ 0.45
C9orf3-204ENST00000424143 ENGASEQ8NFI3 743 aa17.87■□□□□ 0.45
C9orf3-204ENST00000424143 BPIFA3Q9BQP9 254 aa17.87■□□□□ 0.45
C9orf3-204ENST00000424143 DNAJC25Q9H1X3 360 aa17.87■□□□□ 0.45
C9orf3-204ENST00000424143 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.87■□□□□ 0.451e-6■■■■□ 21.1
C9orf3-204ENST00000424143 IMPACTQ9P2X3 320 aa17.87■□□□□ 0.45
C9orf3-204ENST00000424143 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.87■□□□□ 0.45
C9orf3-204ENST00000424143 EXOSC10Q01780 885 aaKnown RBP17.87■□□□□ 0.45
C9orf3-204ENST00000424143 GABPB1Q06547 395 aaPredicted RBP17.87■□□□□ 0.45
C9orf3-204ENST00000424143 NYAP1Q6ZVC0 841 aa17.87■□□□□ 0.45
C9orf3-204ENST00000424143 RIC3Q7Z5B4 369 aa17.87■□□□□ 0.45
C9orf3-204ENST00000424143 JARID2Q92833 1246 aaPredicted RBP17.87■□□□□ 0.45
C9orf3-204ENST00000424143 ZNF274Q96GC6 653 aaPredicted RBP17.87■□□□□ 0.45
C9orf3-204ENST00000424143 CTNNA3Q9UI47 895 aa17.87■□□□□ 0.45
C9orf3-204ENST00000424143 TAF6LQ9Y6J9 622 aa17.87■□□□□ 0.45
C9orf3-204ENST00000424143 ZNF609O15014 1411 aa17.86■□□□□ 0.45
C9orf3-204ENST00000424143 A0A1W2PQ27 194 aa17.86■□□□□ 0.45
C9orf3-204ENST00000424143 A0A1W2PQ64 194 aa17.86■□□□□ 0.45
C9orf3-204ENST00000424143 A0A1W2PQD8 194 aa17.86■□□□□ 0.45
C9orf3-204ENST00000424143 EVCP57679 992 aa17.86■□□□□ 0.45
C9orf3-204ENST00000424143 FAM160A1Q05DH4 1040 aa17.86■□□□□ 0.45
C9orf3-204ENST00000424143 LRMPQ12912 555 aa17.86■□□□□ 0.45
C9orf3-204ENST00000424143 SLFNL1Q499Z3 407 aa17.86■□□□□ 0.45
C9orf3-204ENST00000424143 KBTBD3Q8NAB2 608 aa17.86■□□□□ 0.45
C9orf3-204ENST00000424143 NSUN7Q8NE18 718 aaKnown RBP17.86■□□□□ 0.45
C9orf3-204ENST00000424143 DDX54Q8TDD1 881 aaKnown RBP17.86■□□□□ 0.45
C9orf3-204ENST00000424143 NAT10Q9H0A0 1025 aaKnown RBP17.86■□□□□ 0.45
C9orf3-204ENST00000424143 DBNLQ9UJU6 430 aaKnown RBP17.86■□□□□ 0.45
C9orf3-204ENST00000424143 SALL1Q9NSC2 1324 aa17.86■□□□□ 0.45
C9orf3-204ENST00000424143 JAK2O60674 1132 aa17.85■□□□□ 0.45
C9orf3-204ENST00000424143 CEBPAP49715 358 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-204ENST00000424143 PTPN12Q05209 780 aaKnown RBP17.85■□□□□ 0.45
C9orf3-204ENST00000424143 PSME1Q06323 249 aa17.85■□□□□ 0.45
C9orf3-204ENST00000424143 SNW1Q13573 536 aaKnown RBP17.85■□□□□ 0.45
C9orf3-204ENST00000424143 COL9A3Q14050 684 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-204ENST00000424143 CCDC73Q6ZRK6 1079 aa17.85■□□□□ 0.45
C9orf3-204ENST00000424143 OSBPL5Q9H0X9 879 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-204ENST00000424143 NRBP1Q9UHY1 535 aa17.85■□□□□ 0.45
C9orf3-204ENST00000424143 MORC2Q9Y6X9 1032 aaPredicted RBP17.85■□□□□ 0.45
C9orf3-204ENST00000424143 LAMA4Q16363 1823 aa17.85■□□□□ 0.45
C9orf3-204ENST00000424143 GCP02774 474 aa17.84■□□□□ 0.45
C9orf3-204ENST00000424143 CYP21A2P08686 494 aa17.84■□□□□ 0.45
C9orf3-204ENST00000424143 CBX1P83916 185 aa17.84■□□□□ 0.45
C9orf3-204ENST00000424143 SCRN1Q12765 414 aa17.84■□□□□ 0.45
C9orf3-204ENST00000424143 TPD52L1Q16890 204 aaPredicted RBP17.84■□□□□ 0.45
C9orf3-204ENST00000424143 CEP135Q66GS9 1140 aa17.84■□□□□ 0.45
C9orf3-204ENST00000424143 CCAR1Q8IX12 1150 aaKnown RBP17.84■□□□□ 0.45
C9orf3-204ENST00000424143 DDX41Q9UJV9 622 aaKnown RBP17.84■□□□□ 0.45
C9orf3-204ENST00000424143 C5P01031 1676 aa17.84■□□□□ 0.45
C9orf3-204ENST00000424143 ZNF790Q6PG37 636 aa17.83■□□□□ 0.45
C9orf3-204ENST00000424143 LRP10Q7Z4F1 713 aa17.83■□□□□ 0.45
C9orf3-204ENST00000424143 ANKRD24Q8TF21 1146 aa17.83■□□□□ 0.45
C9orf3-204ENST00000424143 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.83■□□□□ 0.45
C9orf3-204ENST00000424143 LRRC59Q96AG4 307 aaKnown RBP17.83■□□□□ 0.45
C9orf3-204ENST00000424143 CHMP3Q9Y3E7 222 aa17.83■□□□□ 0.45
C9orf3-204ENST00000424143 KINO60870 393 aaKnown RBP17.83■□□□□ 0.44
C9orf3-204ENST00000424143 CCDC144BQ3MJ40 725 aa17.83■□□□□ 0.44
C9orf3-204ENST00000424143 TPRNQ4KMQ1 711 aa17.83■□□□□ 0.44
C9orf3-204ENST00000424143 C14orf37Q86TY3 774 aa17.83■□□□□ 0.44
C9orf3-204ENST00000424143 CCDC144CPQ8IYA2 1237 aa17.83■□□□□ 0.44
C9orf3-204ENST00000424143 CEP57L1Q8IYX8 460 aa17.83■□□□□ 0.44
C9orf3-204ENST00000424143 RTEL1Q9NZ71 1219 aa17.83■□□□□ 0.44
C9orf3-204ENST00000424143 STK3Q13188 491 aa17.82■□□□□ 0.44
C9orf3-204ENST00000424143 EPHA10Q5JZY3 1008 aa17.82■□□□□ 0.44
C9orf3-204ENST00000424143 TAF3Q5VWG9 929 aa17.82■□□□□ 0.44
C9orf3-204ENST00000424143 CREBRFQ8IUR6 639 aa17.82■□□□□ 0.44
C9orf3-204ENST00000424143 DHX40Q8IX18 779 aaKnown RBP17.82■□□□□ 0.44
C9orf3-204ENST00000424143 C16orf45Q96MC5 204 aaPredicted RBP17.82■□□□□ 0.44
C9orf3-204ENST00000424143 TCEANC2Q96MN5 208 aa17.82■□□□□ 0.44
C9orf3-204ENST00000424143 SLC52A2Q9HAB3 445 aa17.82■□□□□ 0.44
C9orf3-204ENST00000424143 FAM53CQ9NYF3 392 aa17.82■□□□□ 0.44
C9orf3-204ENST00000424143 TRPM3Q9HCF6 1732 aaPredicted RBP17.82■□□□□ 0.44
C9orf3-204ENST00000424143 SETD1BQ9UPS6 1966 aaKnown RBP17.81■□□□□ 0.44
C9orf3-204ENST00000424143 ZMYM1Q5SVZ6 1142 aa17.81■□□□□ 0.44
C9orf3-204ENST00000424143 ADALQ6DHV7 355 aa17.81■□□□□ 0.44
C9orf3-204ENST00000424143 ANKRD13DQ6ZTN6 518 aa17.81■□□□□ 0.44
C9orf3-204ENST00000424143 ERO1AQ96HE7 468 aa17.81■□□□□ 0.44
C9orf3-204ENST00000424143 BECN2A8MW95 431 aa17.8■□□□□ 0.44
C9orf3-204ENST00000424143 CTDNEP1O95476 244 aa17.8■□□□□ 0.44
C9orf3-204ENST00000424143 HSP90B1P14625 803 aaKnown RBP17.8■□□□□ 0.44
C9orf3-204ENST00000424143 CCZ1BP86790 482 aa17.8■□□□□ 0.44
C9orf3-204ENST00000424143 CCZ1P86791 482 aaPredicted RBP17.8■□□□□ 0.44
C9orf3-204ENST00000424143 TFCP2Q12800 502 aa17.8■□□□□ 0.44
C9orf3-204ENST00000424143 PTPN14Q15678 1187 aa17.8■□□□□ 0.44
C9orf3-204ENST00000424143 ZNF397Q8NF99 534 aaPredicted RBP17.8■□□□□ 0.44
C9orf3-204ENST00000424143 XAGE3Q8WTP9 111 aa17.8■□□□□ 0.44
C9orf3-204ENST00000424143 SIL1Q9H173 461 aa17.8■□□□□ 0.44
C9orf3-204ENST00000424143 AFDNP55196 1824 aaKnown RBP17.8■□□□□ 0.44
C9orf3-204ENST00000424143 PTPDC1A2A3K4 754 aa17.8■□□□□ 0.44
C9orf3-204ENST00000424143 U2AF2P26368 475 aaKnown RBP eCLIP17.8■□□□□ 0.443e-8■□□□□ 10.3
C9orf3-204ENST00000424143 CASP7P55210 303 aa17.8■□□□□ 0.44
C9orf3-204ENST00000424143 C11orf57Q6ZUT1 292 aaPredicted RBP17.8■□□□□ 0.44
C9orf3-204ENST00000424143 CCAR2Q8N163 923 aaKnown RBP17.8■□□□□ 0.44
C9orf3-204ENST00000424143 CCDC150Q8NCX0 1101 aa17.8■□□□□ 0.44
C9orf3-204ENST00000424143 PRAMEF22A3QJZ6 481 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms