RNA–Protein interactions for RNA: ENST00000423701.6

SEC22C-207, Transcript of SEC22 homolog C, vesicle trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene SEC22C, Length 1,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22C-207ENST00000423701 RNF181Q9P0P0 153 aa27.12■■□□□ 1.93
SEC22C-207ENST00000423701 TIAM2Q8IVF5 1701 aa27.11■■□□□ 1.93
SEC22C-207ENST00000423701 RTFDC1Q9BY42 306 aaPredicted RBP27.11■■□□□ 1.93
SEC22C-207ENST00000423701 DDX19BQ9UMR2 479 aa27.11■■□□□ 1.93
SEC22C-207ENST00000423701 MINPP1Q9UNW1 487 aa27.11■■□□□ 1.93
SEC22C-207ENST00000423701 A0A1B0GUL6 1792 aa27.1■■□□□ 1.93
SEC22C-207ENST00000423701 RFX5P48382 616 aaPredicted RBP27.09■■□□□ 1.93
SEC22C-207ENST00000423701 C1orf115Q9H7X2 142 aa27.09■■□□□ 1.93
SEC22C-207ENST00000423701 PODXL2Q9NZ53 605 aa27.09■■□□□ 1.93
SEC22C-207ENST00000423701 DICER1Q9UPY3 1922 aaKnown RBP27.09■■□□□ 1.93
SEC22C-207ENST00000423701 MTX1Q13505 466 aa27.08■■□□□ 1.93
SEC22C-207ENST00000423701 LDHAL6AQ6ZMR3 332 aa27.08■■□□□ 1.93
SEC22C-207ENST00000423701 KLHDC4Q8TBB5 520 aa27.08■■□□□ 1.93
SEC22C-207ENST00000423701 ANKIB1Q9P2G1 1089 aa27.08■■□□□ 1.93
SEC22C-207ENST00000423701 XDHP47989 1333 aa27.07■■□□□ 1.92
SEC22C-207ENST00000423701 IARSP41252 1262 aaKnown RBP27.07■■□□□ 1.92
SEC22C-207ENST00000423701 SUPT20HQ8NEM7 779 aa27.07■■□□□ 1.92
SEC22C-207ENST00000423701 CNNM1Q9NRU3 951 aa27.06■■□□□ 1.92
SEC22C-207ENST00000423701 POLLQ9UGP5 575 aa27.06■■□□□ 1.92
SEC22C-207ENST00000423701 COL4A5P29400 1685 aa27.06■■□□□ 1.92
SEC22C-207ENST00000423701 CHRNDQ07001 517 aa27.06■■□□□ 1.92
SEC22C-207ENST00000423701 TBC1D16Q8TBP0 767 aa27.06■■□□□ 1.92
SEC22C-207ENST00000423701 PUS3Q9BZE2 481 aaKnown RBP27.06■■□□□ 1.92
SEC22C-207ENST00000423701 SRGAP3O43295 1099 aa27.05■■□□□ 1.92
SEC22C-207ENST00000423701 UFL1O94874 794 aa27.05■■□□□ 1.92
SEC22C-207ENST00000423701 PTPN12Q05209 780 aaKnown RBP27.05■■□□□ 1.92
SEC22C-207ENST00000423701 GGA1Q9UJY5 639 aa27.05■■□□□ 1.92
SEC22C-207ENST00000423701 C6orf229H3BNL8 230 aa27.04■■□□□ 1.92
SEC22C-207ENST00000423701 YY1P25490 414 aa27.04■■□□□ 1.92
SEC22C-207ENST00000423701 ZBTB40Q9NUA8 1239 aa27.04■■□□□ 1.92
SEC22C-207ENST00000423701 PNMA6EA0A0J9YXQ4 647 aa27.03■■□□□ 1.92
SEC22C-207ENST00000423701 PPIP5K2O43314 1243 aa27.03■■□□□ 1.92
SEC22C-207ENST00000423701 AOC3Q16853 763 aa27.03■■□□□ 1.92
SEC22C-207ENST00000423701 ANKRD2Q9GZV1 360 aa27.03■■□□□ 1.92
SEC22C-207ENST00000423701 LRRC24Q50LG9 513 aa27.02■■□□□ 1.92
SEC22C-207ENST00000423701 GPR101Q96P66 508 aaPredicted RBP27.02■■□□□ 1.92
SEC22C-207ENST00000423701 VPS33BQ9H267 617 aa27.02■■□□□ 1.92
SEC22C-207ENST00000423701 CHMP4BQ9H444 224 aaKnown RBP27.02■■□□□ 1.92
SEC22C-207ENST00000423701 RIPOR2Q9Y4F9 1068 aa27.02■■□□□ 1.92
SEC22C-207ENST00000423701 ZC3H4Q9UPT8 1303 aaKnown RBP27.02■■□□□ 1.92
SEC22C-207ENST00000423701 WTIPA6NIX2 430 aaPredicted RBP27.01■■□□□ 1.91
SEC22C-207ENST00000423701 ATP2B4P23634 1241 aa27.01■■□□□ 1.91
SEC22C-207ENST00000423701 KIAA2012Q0VF49 1180 aa27.01■■□□□ 1.91
SEC22C-207ENST00000423701 LARGE2Q8N3Y3 721 aa27.01■■□□□ 1.91
SEC22C-207ENST00000423701 SUPT16HQ9Y5B9 1047 aaKnown RBP27.01■■□□□ 1.91
SEC22C-207ENST00000423701 WASHC4Q2M389 1173 aa27■■□□□ 1.91
SEC22C-207ENST00000423701 HELBQ8NG08 1087 aaPredicted RBP27■■□□□ 1.91
SEC22C-207ENST00000423701 PA2G4Q9UQ80 394 aaKnown RBP27■■□□□ 1.91
SEC22C-207ENST00000423701 EYA2O00167 538 aa27■■□□□ 1.91
SEC22C-207ENST00000423701 TAF5LO75529 589 aa27■■□□□ 1.91
SEC22C-207ENST00000423701 EYA3Q99504 573 aa27■■□□□ 1.91
SEC22C-207ENST00000423701 SIL1Q9H173 461 aa27■■□□□ 1.91
SEC22C-207ENST00000423701 COPRSQ9NQ92 184 aa27■■□□□ 1.91
SEC22C-207ENST00000423701 MROH5Q6ZUA9 1318 aa26.99■■□□□ 1.91
SEC22C-207ENST00000423701 ATP8B2P98198 1209 aa26.99■■□□□ 1.91
SEC22C-207ENST00000423701 CEP85Q6P2H3 762 aa26.99■■□□□ 1.91
SEC22C-207ENST00000423701 LEMD3Q9Y2U8 911 aa26.99■■□□□ 1.91
SEC22C-207ENST00000423701 RIMBP2O15034 1052 aa26.98■■□□□ 1.91
SEC22C-207ENST00000423701 JDP2Q8WYK2 163 aa26.98■■□□□ 1.91
SEC22C-207ENST00000423701 FBXO3Q9UK99 471 aa26.98■■□□□ 1.91
SEC22C-207ENST00000423701 ZNF804BA4D1E1 1349 aa26.97■■□□□ 1.91
SEC22C-207ENST00000423701 POLA2Q14181 598 aa26.97■■□□□ 1.91
SEC22C-207ENST00000423701 ATG9AQ7Z3C6 839 aa26.97■■□□□ 1.91
SEC22C-207ENST00000423701 NIM1KQ8IY84 436 aa26.97■■□□□ 1.91
SEC22C-207ENST00000423701 MED23Q9ULK4 1368 aa26.96■■□□□ 1.91
SEC22C-207ENST00000423701 SNAP23O00161 211 aa26.96■■□□□ 1.91
SEC22C-207ENST00000423701 CIAO1O76071 339 aa26.96■■□□□ 1.91
SEC22C-207ENST00000423701 KCNJ4P48050 445 aa26.96■■□□□ 1.91
SEC22C-207ENST00000423701 METTL24Q5JXM2 366 aa26.96■■□□□ 1.91
SEC22C-207ENST00000423701 SSH3Q8TE77 659 aa26.96■■□□□ 1.91
SEC22C-207ENST00000423701 ZC3H12CQ9C0D7 883 aaKnown RBP26.96■■□□□ 1.91
SEC22C-207ENST00000423701 VGLL2Q8N8G2 317 aa26.95■■□□□ 1.91
SEC22C-207ENST00000423701 CRBNQ96SW2 442 aa26.95■■□□□ 1.91
SEC22C-207ENST00000423701 FZD9O00144 591 aa26.94■■□□□ 1.9
SEC22C-207ENST00000423701 KLRK1P26718 216 aa26.94■■□□□ 1.9
SEC22C-207ENST00000423701 DBNDD1Q9H9R9 158 aa26.93■■□□□ 1.9
SEC22C-207ENST00000423701 ZNF541Q9H0D2 1346 aa26.93■■□□□ 1.9
SEC22C-207ENST00000423701 PDE8BO95263 885 aa26.92■■□□□ 1.9
SEC22C-207ENST00000423701 IL15P40933 162 aaPredicted RBP26.92■■□□□ 1.9
SEC22C-207ENST00000423701 TXNRD3Q86VQ6 643 aa26.92■■□□□ 1.9
SEC22C-207ENST00000423701 ZNRF3Q9ULT6 936 aa26.92■■□□□ 1.9
SEC22C-207ENST00000423701 IRS2Q9Y4H2 1338 aa26.92■■□□□ 1.9
SEC22C-207ENST00000423701 UBE4AQ14139 1066 aa26.91■■□□□ 1.9
SEC22C-207ENST00000423701 DOK7Q18PE1 504 aa26.91■■□□□ 1.9
SEC22C-207ENST00000423701 RPAP2Q8IXW5 612 aaPredicted RBP26.91■■□□□ 1.9
SEC22C-207ENST00000423701 ECE2O60344 883 aa26.9■■□□□ 1.9
SEC22C-207ENST00000423701 SIRT2Q8IXJ6 389 aa26.9■■□□□ 1.9
SEC22C-207ENST00000423701 ZNF526Q8TF50 670 aaPredicted RBP26.9■■□□□ 1.9
SEC22C-207ENST00000423701 GLTPD2A6NH11 291 aa26.89■■□□□ 1.9
SEC22C-207ENST00000423701 YDJCA8MPS7 323 aa26.89■■□□□ 1.9
SEC22C-207ENST00000423701 EIF6P56537 245 aaKnown RBP26.88■■□□□ 1.89
SEC22C-207ENST00000423701 C15orf52Q6ZUT6 534 aaKnown RBP26.88■■□□□ 1.89
SEC22C-207ENST00000423701 ZNF784Q8NCA9 323 aaPredicted RBP26.88■■□□□ 1.89
SEC22C-207ENST00000423701 G3V3G9 751 aa26.87■■□□□ 1.89
SEC22C-207ENST00000423701 PUM3Q15397 648 aaKnown RBP26.87■■□□□ 1.89
SEC22C-207ENST00000423701 DCAF8Q5TAQ9 597 aa26.87■■□□□ 1.89
SEC22C-207ENST00000423701 DPY19L2Q6NUT2 758 aa26.87■■□□□ 1.89
SEC22C-207ENST00000423701 CEP126Q9P2H0 1117 aa26.87■■□□□ 1.89
SEC22C-207ENST00000423701 SURF6O75683 361 aaKnown RBP26.87■■□□□ 1.89
SEC22C-207ENST00000423701 G3BP1Q13283 466 aaKnown RBP eCLIP26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms