RNA–Protein interactions for RNA: ENST00000416671.5

CHEK2-210, Transcript of checkpoint kinase 2, humanhuman

TSL 1 (best)

Gene CHEK2, Length 2,560 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-210ENST00000416671 ERC1Q8IUD2 1116 aa16.31■□□□□ 0.2
CHEK2-210ENST00000416671 LSG1Q9H089 658 aaKnown RBP16.31■□□□□ 0.2
CHEK2-210ENST00000416671 NUP62CLQ9H1M0 184 aa16.31■□□□□ 0.2
CHEK2-210ENST00000416671 MTMR6Q9Y217 621 aa16.31■□□□□ 0.2
CHEK2-210ENST00000416671 USP42Q9H9J4 1324 aaKnown RBP16.3■□□□□ 0.2
CHEK2-210ENST00000416671 MRC1P22897 1456 aa16.3■□□□□ 0.2
CHEK2-210ENST00000416671 KCNJ4P48050 445 aa16.3■□□□□ 0.2
CHEK2-210ENST00000416671 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.3■□□□□ 0.2
CHEK2-210ENST00000416671 RASEFQ8IZ41 740 aa16.3■□□□□ 0.2
CHEK2-210ENST00000416671 TRIM5Q9C035 493 aa16.3■□□□□ 0.2
CHEK2-210ENST00000416671 COL14A1Q05707 1796 aaKnown RBP16.3■□□□□ 0.2
CHEK2-210ENST00000416671 NBPF26B4DH59 902 aa16.3■□□□□ 0.2
CHEK2-210ENST00000416671 NBPF14Q5TI25 921 aa16.3■□□□□ 0.2
CHEK2-210ENST00000416671 NBPF10Q6P3W6 841 aaKnown RBP16.3■□□□□ 0.2
CHEK2-210ENST00000416671 NBPF15Q8N660 670 aa16.3■□□□□ 0.2
CHEK2-210ENST00000416671 ZNF397Q8NF99 534 aaPredicted RBP16.3■□□□□ 0.2
CHEK2-210ENST00000416671 BOLA2Q9H3K6 86 aa16.3■□□□□ 0.2
CHEK2-210ENST00000416671 A0A087WZG4 1122 aa16.29■□□□□ 0.2
CHEK2-210ENST00000416671 A1BGP04217 495 aa16.29■□□□□ 0.2
CHEK2-210ENST00000416671 CPA1P15085 419 aa16.29■□□□□ 0.2
CHEK2-210ENST00000416671 CEP135Q66GS9 1140 aa16.29■□□□□ 0.2
CHEK2-210ENST00000416671 SHANK3Q9BYB0 1731 aa16.29■□□□□ 0.2
CHEK2-210ENST00000416671 ZNF75DP51815 510 aa16.29■□□□□ 0.2
CHEK2-210ENST00000416671 PTH1RQ03431 593 aa16.29■□□□□ 0.2
CHEK2-210ENST00000416671 CAMK4Q16566 473 aa16.29■□□□□ 0.2
CHEK2-210ENST00000416671 TTLL7Q6ZT98 887 aa16.29■□□□□ 0.2
CHEK2-210ENST00000416671 PLA2G4DQ86XP0 818 aa16.29■□□□□ 0.2
CHEK2-210ENST00000416671 GPATCH3Q96I76 525 aa16.29■□□□□ 0.2
CHEK2-210ENST00000416671 CBX8Q9HC52 389 aa16.29■□□□□ 0.2
CHEK2-210ENST00000416671 NAP1L2Q9ULW6 460 aaPredicted RBP16.29■□□□□ 0.2
CHEK2-210ENST00000416671 VPS37CA5D8V6 355 aaPredicted RBP16.28■□□□□ 0.2
CHEK2-210ENST00000416671 CCDC83Q8IWF9 413 aa16.28■□□□□ 0.2
CHEK2-210ENST00000416671 ZNF592Q92610 1267 aa16.28■□□□□ 0.2
CHEK2-210ENST00000416671 CHMP3Q9Y3E7 222 aa16.28■□□□□ 0.2
CHEK2-210ENST00000416671 DTNBO60941 627 aa16.28■□□□□ 0.2
CHEK2-210ENST00000416671 IRX5P78411 483 aaPredicted RBP16.28■□□□□ 0.2
CHEK2-210ENST00000416671 ANO6Q4KMQ2 910 aa16.28■□□□□ 0.2
CHEK2-210ENST00000416671 EDC3Q96F86 508 aaKnown RBP16.28■□□□□ 0.2
CHEK2-210ENST00000416671 FAM227BQ96M60 508 aa16.28■□□□□ 0.2
CHEK2-210ENST00000416671 TIGD1Q96MW7 591 aa16.28■□□□□ 0.2
CHEK2-210ENST00000416671 NDUFB9Q9Y6M9 179 aa16.28■□□□□ 0.2
CHEK2-210ENST00000416671 TNMDQ9H2S6 317 aa16.27■□□□□ 0.2
CHEK2-210ENST00000416671 LARGE1O95461 756 aa16.27■□□□□ 0.19
CHEK2-210ENST00000416671 KMT5BQ4FZB7 885 aa16.27■□□□□ 0.19
CHEK2-210ENST00000416671 ZNF330Q9Y3S2 320 aaPredicted RBP16.27■□□□□ 0.19
CHEK2-210ENST00000416671 CCDC9Q9Y3X0 531 aaKnown RBP16.27■□□□□ 0.19
CHEK2-210ENST00000416671 KAT6BQ8WYB5 2073 aa16.26■□□□□ 0.19
CHEK2-210ENST00000416671 AFDNP55196 1824 aaKnown RBP16.26■□□□□ 0.19
CHEK2-210ENST00000416671 CASTP20810 708 aaKnown RBP16.26■□□□□ 0.19
CHEK2-210ENST00000416671 KRT85P78386 507 aa16.26■□□□□ 0.19
CHEK2-210ENST00000416671 CKAP2LQ8IYA6 745 aa16.26■□□□□ 0.19
CHEK2-210ENST00000416671 CACTINQ8WUQ7 758 aaKnown RBP16.26■□□□□ 0.19
CHEK2-210ENST00000416671 ZBTB3Q9H5J0 574 aa16.26■□□□□ 0.19
CHEK2-210ENST00000416671 CLIP2Q9UDT6 1046 aa16.26■□□□□ 0.19
CHEK2-210ENST00000416671 GLI3P10071 1580 aa16.26■□□□□ 0.19
CHEK2-210ENST00000416671 LIG1P18858 919 aa16.26■□□□□ 0.19
CHEK2-210ENST00000416671 PTPN12Q05209 780 aaKnown RBP16.26■□□□□ 0.19
CHEK2-210ENST00000416671 NKX1-1Q15270 411 aaPredicted RBP16.26■□□□□ 0.19
CHEK2-210ENST00000416671 TTC6Q86TZ1 520 aa16.26■□□□□ 0.19
CHEK2-210ENST00000416671 PLBD2Q8NHP8 589 aa16.26■□□□□ 0.19
CHEK2-210ENST00000416671 VGLL3A8MV65 326 aa16.25■□□□□ 0.19
CHEK2-210ENST00000416671 TDRD7Q8NHU6 1098 aaKnown RBP16.25■□□□□ 0.19
CHEK2-210ENST00000416671 EVI5LQ96CN4 794 aa16.25■□□□□ 0.19
CHEK2-210ENST00000416671 ZSCAN31Q96LW9 406 aaPredicted RBP16.25■□□□□ 0.19
CHEK2-210ENST00000416671 BCL11BQ9C0K0 894 aaPredicted RBP16.25■□□□□ 0.19
CHEK2-210ENST00000416671 FAM53CQ9NYF3 392 aa16.25■□□□□ 0.19
CHEK2-210ENST00000416671 ELP1O95163 1332 aa16.25■□□□□ 0.19
CHEK2-210ENST00000416671 CCDC171Q6TFL3 1326 aa16.25■□□□□ 0.19
CHEK2-210ENST00000416671 ARFGEF2Q9Y6D5 1785 aa16.25■□□□□ 0.19
CHEK2-210ENST00000416671 RFX5P48382 616 aaPredicted RBP16.25■□□□□ 0.19
CHEK2-210ENST00000416671 FAM193AP78312 1265 aa16.25■□□□□ 0.19
CHEK2-210ENST00000416671 TFCP2Q12800 502 aa16.25■□□□□ 0.19
CHEK2-210ENST00000416671 PRPF40BQ6NWY9 871 aaKnown RBP16.25■□□□□ 0.19
CHEK2-210ENST00000416671 SH2B1Q9NRF2 756 aaPredicted RBP16.25■□□□□ 0.19
CHEK2-210ENST00000416671 CALCOCO1Q9P1Z2 691 aa16.25■□□□□ 0.19
CHEK2-210ENST00000416671 PLCH1Q4KWH8 1693 aa16.24■□□□□ 0.19
CHEK2-210ENST00000416671 ADCK5Q3MIX3 580 aa16.24■□□□□ 0.19
CHEK2-210ENST00000416671 C8orf37Q96NL8 207 aa16.24■□□□□ 0.19
CHEK2-210ENST00000416671 ZNF215Q9UL58 517 aaPredicted RBP16.24■□□□□ 0.19
CHEK2-210ENST00000416671 ERVV-2B6SEH9 535 aa16.24■□□□□ 0.19
CHEK2-210ENST00000416671 NMIQ13287 307 aaPredicted RBP16.24■□□□□ 0.19
CHEK2-210ENST00000416671 LMBR1LQ6UX01 489 aa16.24■□□□□ 0.19
CHEK2-210ENST00000416671 IPO4Q8TEX9 1081 aaKnown RBP16.24■□□□□ 0.19
CHEK2-210ENST00000416671 DISP2A7MBM2 1401 aa16.23■□□□□ 0.19
CHEK2-210ENST00000416671 CHGBP05060 677 aa16.23■□□□□ 0.19
CHEK2-210ENST00000416671 CERKQ8TCT0 537 aa16.23■□□□□ 0.19
CHEK2-210ENST00000416671 FSD1Q9BTV5 496 aa16.23■□□□□ 0.19
CHEK2-210ENST00000416671 DACT1Q9NYF0 836 aa16.23■□□□□ 0.19
CHEK2-210ENST00000416671 PLEKHG2Q9H7P9 1386 aa16.23■□□□□ 0.19
CHEK2-210ENST00000416671 GOLGA6L4A6NEF3 574 aa16.23■□□□□ 0.19
CHEK2-210ENST00000416671 PTPN14Q15678 1187 aa16.23■□□□□ 0.19
CHEK2-210ENST00000416671 RUFY2Q8WXA3 655 aa16.23■□□□□ 0.19
CHEK2-210ENST00000416671 PDRG1Q9NUG6 133 aa16.23■□□□□ 0.19
CHEK2-210ENST00000416671 DBNLQ9UJU6 430 aaKnown RBP16.23■□□□□ 0.19
CHEK2-210ENST00000416671 TOGARAM1Q9Y4F4 1720 aa16.22■□□□□ 0.19
CHEK2-210ENST00000416671 A0A0D9SFI3 127 aa16.22■□□□□ 0.19
CHEK2-210ENST00000416671 ERICH4A6NGS2 130 aa16.22■□□□□ 0.19
CHEK2-210ENST00000416671 CDC25BP30305 580 aa16.22■□□□□ 0.19
CHEK2-210ENST00000416671 ZNF165P49910 485 aa16.22■□□□□ 0.19
CHEK2-210ENST00000416671 CASP7P55210 303 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 1966 ms