RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 SUPT16HQ9Y5B9 1047 aaKnown RBP14.87□□□□□ -0.03
ATG4B-207ENST00000415107 XDHP47989 1333 aa14.87□□□□□ -0.03
ATG4B-207ENST00000415107 ZC3H4Q9UPT8 1303 aaKnown RBP14.87□□□□□ -0.03
ATG4B-207ENST00000415107 CHD4Q14839 1912 aa14.86□□□□□ -0.03
ATG4B-207ENST00000415107 DICER1Q9UPY3 1922 aaKnown RBP14.86□□□□□ -0.03
ATG4B-207ENST00000415107 SRGAP3O43295 1099 aa14.86□□□□□ -0.03
ATG4B-207ENST00000415107 MPNDQ8N594 471 aa14.86□□□□□ -0.03
ATG4B-207ENST00000415107 SUPT20HQ8NEM7 779 aa14.86□□□□□ -0.03
ATG4B-207ENST00000415107 ANKRD2Q9GZV1 360 aa14.86□□□□□ -0.03
ATG4B-207ENST00000415107 MINPP1Q9UNW1 487 aa14.86□□□□□ -0.03
ATG4B-207ENST00000415107 RIPOR2Q9Y4F9 1068 aa14.86□□□□□ -0.03
ATG4B-207ENST00000415107 MROH5Q6ZUA9 1318 aa14.86□□□□□ -0.03
ATG4B-207ENST00000415107 EYA2O00167 538 aa14.85□□□□□ -0.03
ATG4B-207ENST00000415107 CENPBP07199 599 aaPredicted RBP14.85□□□□□ -0.03
ATG4B-207ENST00000415107 TAF7LQ5H9L4 462 aa14.85□□□□□ -0.03
ATG4B-207ENST00000415107 LDHAL6AQ6ZMR3 332 aa14.85□□□□□ -0.03
ATG4B-207ENST00000415107 PELP1Q8IZL8 1130 aaKnown RBP14.85□□□□□ -0.03
ATG4B-207ENST00000415107 WWC3Q9ULE0 1092 aa14.85□□□□□ -0.03
ATG4B-207ENST00000415107 PNMA6EA0A0J9YXQ4 647 aa14.84□□□□□ -0.03
ATG4B-207ENST00000415107 LMNB1P20700 586 aa14.84□□□□□ -0.03
ATG4B-207ENST00000415107 OLFM4Q6UX06 510 aa14.84□□□□□ -0.03
ATG4B-207ENST00000415107 DPP8Q6V1X1 898 aaPredicted RBP14.84□□□□□ -0.03
ATG4B-207ENST00000415107 ARHGAP27Q6ZUM4 889 aa14.84□□□□□ -0.03
ATG4B-207ENST00000415107 VGLL2Q8N8G2 317 aa14.84□□□□□ -0.03
ATG4B-207ENST00000415107 LEMD3Q9Y2U8 911 aa14.84□□□□□ -0.03
ATG4B-207ENST00000415107 NOP58Q9Y2X3 529 aaKnown RBP14.84□□□□□ -0.03
ATG4B-207ENST00000415107 ATP2B4P23634 1241 aa14.83□□□□□ -0.04
ATG4B-207ENST00000415107 IL15P40933 162 aaPredicted RBP14.83□□□□□ -0.04
ATG4B-207ENST00000415107 GPSM2P81274 684 aa14.83□□□□□ -0.04
ATG4B-207ENST00000415107 CHRNDQ07001 517 aa14.83□□□□□ -0.04
ATG4B-207ENST00000415107 C15orf52Q6ZUT6 534 aaKnown RBP14.83□□□□□ -0.04
ATG4B-207ENST00000415107 ZNF594Q96JF6 807 aaPredicted RBP14.83□□□□□ -0.04
ATG4B-207ENST00000415107 CRBNQ96SW2 442 aa14.83□□□□□ -0.04
ATG4B-207ENST00000415107 C1orf115Q9H7X2 142 aa14.83□□□□□ -0.04
ATG4B-207ENST00000415107 CNNM1Q9NRU3 951 aa14.83□□□□□ -0.04
ATG4B-207ENST00000415107 MED23Q9ULK4 1368 aa14.83□□□□□ -0.04
ATG4B-207ENST00000415107 HMMRO75330 724 aa14.82□□□□□ -0.04
ATG4B-207ENST00000415107 KIAA2012Q0VF49 1180 aa14.82□□□□□ -0.04
ATG4B-207ENST00000415107 ATG9AQ7Z3C6 839 aa14.82□□□□□ -0.04
ATG4B-207ENST00000415107 SLC51AQ86UW1 340 aa14.82□□□□□ -0.04
ATG4B-207ENST00000415107 TBC1D16Q8TBP0 767 aa14.82□□□□□ -0.04
ATG4B-207ENST00000415107 EYA3Q99504 573 aa14.82□□□□□ -0.04
ATG4B-207ENST00000415107 GGA1Q9UJY5 639 aa14.82□□□□□ -0.04
ATG4B-207ENST00000415107 NSFL1CQ9UNZ2 370 aaKnown RBP14.82□□□□□ -0.04
ATG4B-207ENST00000415107 TIAM2Q8IVF5 1701 aa14.82□□□□□ -0.04
ATG4B-207ENST00000415107 ZBTB22O15209 634 aa14.81□□□□□ -0.04
ATG4B-207ENST00000415107 IARSP41252 1262 aaKnown RBP14.81□□□□□ -0.04
ATG4B-207ENST00000415107 PRELPP51888 382 aa14.81□□□□□ -0.04
ATG4B-207ENST00000415107 RASSF7Q02833 373 aa14.81□□□□□ -0.04
ATG4B-207ENST00000415107 UBE4AQ14139 1066 aa14.81□□□□□ -0.04
ATG4B-207ENST00000415107 LRRC24Q50LG9 513 aa14.81□□□□□ -0.04
ATG4B-207ENST00000415107 KLHDC4Q8TBB5 520 aa14.81□□□□□ -0.04
ATG4B-207ENST00000415107 PUS3Q9BZE2 481 aaKnown RBP14.81□□□□□ -0.04
ATG4B-207ENST00000415107 ANKIB1Q9P2G1 1089 aa14.81□□□□□ -0.04
ATG4B-207ENST00000415107 ZNF219Q9P2Y4 722 aaPredicted RBP14.81□□□□□ -0.04
ATG4B-207ENST00000415107 POLLQ9UGP5 575 aa14.81□□□□□ -0.04
ATG4B-207ENST00000415107 IRS2Q9Y4H2 1338 aa14.81□□□□□ -0.04
ATG4B-207ENST00000415107 PDE8BO95263 885 aa14.8□□□□□ -0.04
ATG4B-207ENST00000415107 SIRT2Q8IXJ6 389 aa14.8□□□□□ -0.04
ATG4B-207ENST00000415107 ZNF804BA4D1E1 1349 aa14.8□□□□□ -0.04
ATG4B-207ENST00000415107 COL4A5P29400 1685 aa14.8□□□□□ -0.04
ATG4B-207ENST00000415107 ARAP2Q8WZ64 1704 aa14.8□□□□□ -0.04
ATG4B-207ENST00000415107 CCDC88AQ3V6T2 1871 aa14.8□□□□□ -0.04
ATG4B-207ENST00000415107 UFL1O94874 794 aa14.79□□□□□ -0.04
ATG4B-207ENST00000415107 PA2G4Q9UQ80 394 aaKnown RBP14.79□□□□□ -0.04
ATG4B-207ENST00000415107 ZNF609O15014 1411 aa14.78□□□□□ -0.04
ATG4B-207ENST00000415107 FGFR2P21802 821 aa14.78□□□□□ -0.04
ATG4B-207ENST00000415107 WASHC4Q2M389 1173 aa14.78□□□□□ -0.04
ATG4B-207ENST00000415107 HSP90AB4PQ58FF6 505 aa14.78□□□□□ -0.04
ATG4B-207ENST00000415107 METTL24Q5JXM2 366 aa14.78□□□□□ -0.04
ATG4B-207ENST00000415107 GPR108Q9NPR9 543 aa14.78□□□□□ -0.04
ATG4B-207ENST00000415107 FZD9O00144 591 aa14.77□□□□□ -0.05
ATG4B-207ENST00000415107 PPIP5K2O43314 1243 aa14.77□□□□□ -0.05
ATG4B-207ENST00000415107 PUM3Q15397 648 aaKnown RBP14.77□□□□□ -0.05
ATG4B-207ENST00000415107 C9orf131Q5VYM1 1079 aa14.77□□□□□ -0.05
ATG4B-207ENST00000415107 ERC1Q8IUD2 1116 aa14.77□□□□□ -0.05
ATG4B-207ENST00000415107 ZNF277Q9NRM2 450 aaPredicted RBP14.77□□□□□ -0.05
ATG4B-207ENST00000415107 RNF181Q9P0P0 153 aa14.77□□□□□ -0.05
ATG4B-207ENST00000415107 PSME4Q14997 1843 aa14.77□□□□□ -0.05
ATG4B-207ENST00000415107 C6orf229H3BNL8 230 aa14.76□□□□□ -0.05
ATG4B-207ENST00000415107 G3BP1Q13283 466 aaKnown RBP eCLIP14.76□□□□□ -0.05
ATG4B-207ENST00000415107 HDAC1Q13547 482 aaPredicted RBP14.76□□□□□ -0.05
ATG4B-207ENST00000415107 EXOC6Q8TAG9 804 aa14.76□□□□□ -0.05
ATG4B-207ENST00000415107 JDP2Q8WYK2 163 aa14.76□□□□□ -0.05
ATG4B-207ENST00000415107 LPIN2Q92539 896 aa14.76□□□□□ -0.05
ATG4B-207ENST00000415107 ZC3H12CQ9C0D7 883 aaKnown RBP14.76□□□□□ -0.05
ATG4B-207ENST00000415107 SIL1Q9H173 461 aa14.76□□□□□ -0.05
ATG4B-207ENST00000415107 CEP126Q9P2H0 1117 aa14.76□□□□□ -0.05
ATG4B-207ENST00000415107 PCDHB15Q9Y5E8 787 aa14.76□□□□□ -0.05
ATG4B-207ENST00000415107 RAB11FIP3O75154 756 aa14.75□□□□□ -0.05
ATG4B-207ENST00000415107 TAF5LO75529 589 aa14.75□□□□□ -0.05
ATG4B-207ENST00000415107 SURF6O75683 361 aaKnown RBP14.75□□□□□ -0.05
ATG4B-207ENST00000415107 SASH1O94885 1247 aa14.75□□□□□ -0.05
ATG4B-207ENST00000415107 AOC3Q16853 763 aa14.75□□□□□ -0.05
ATG4B-207ENST00000415107 PODNQ7Z5L7 613 aa14.75□□□□□ -0.05
ATG4B-207ENST00000415107 LARGE2Q8N3Y3 721 aa14.75□□□□□ -0.05
ATG4B-207ENST00000415107 COA1Q9GZY4 146 aa14.75□□□□□ -0.05
ATG4B-207ENST00000415107 AKAP2Q9Y2D5 859 aa14.75□□□□□ -0.05
ATG4B-207ENST00000415107 ZNF646O15015 1829 aaPredicted RBP14.74□□□□□ -0.05
ATG4B-207ENST00000415107 IFIT1P09914 478 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms