RNA–Protein interactions for RNA: ENST00000414620.1

ACTB-202, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 561 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-202ENST00000414620 PSMD14O00487 310 aa19.93■□□□□ 0.78
ACTB-202ENST00000414620 UFL1O94874 794 aa19.93■□□□□ 0.78
ACTB-202ENST00000414620 ANKIB1Q9P2G1 1089 aa19.93■□□□□ 0.78
ACTB-202ENST00000414620 NEURL1BA8MQ27 555 aa19.92■□□□□ 0.78
ACTB-202ENST00000414620 CTSWP56202 376 aa19.92■□□□□ 0.78
ACTB-202ENST00000414620 EXOSC9Q06265 439 aaKnown RBP19.92■□□□□ 0.78
ACTB-202ENST00000414620 ANKRD18AQ8IVF6 992 aa19.92■□□□□ 0.78
ACTB-202ENST00000414620 MICALL2Q8IY33 904 aa19.92■□□□□ 0.78
ACTB-202ENST00000414620 KCNQ5Q9NR82 932 aa19.92■□□□□ 0.78
ACTB-202ENST00000414620 CNOT7Q9UIV1 285 aaKnown RBP19.92■□□□□ 0.78
ACTB-202ENST00000414620 FLIIQ13045 1269 aa19.91■□□□□ 0.78
ACTB-202ENST00000414620 FKBP5Q13451 457 aaPredicted RBP19.91■□□□□ 0.78
ACTB-202ENST00000414620 DEFB115Q30KQ5 88 aa19.91■□□□□ 0.78
ACTB-202ENST00000414620 NCBP3Q53F19 620 aaKnown RBP19.91■□□□□ 0.78
ACTB-202ENST00000414620 GLIS2Q9BZE0 524 aaPredicted RBP19.91■□□□□ 0.78
ACTB-202ENST00000414620 GGA1Q9UJY5 639 aa19.91■□□□□ 0.78
ACTB-202ENST00000414620 RTL9Q8NET4 1388 aa19.91■□□□□ 0.78
ACTB-202ENST00000414620 RASSF10A6NK89 507 aa19.9■□□□□ 0.78
ACTB-202ENST00000414620 HIRAP54198 1017 aaPredicted RBP19.9■□□□□ 0.78
ACTB-202ENST00000414620 PAXIP1Q6ZW49 1069 aaPredicted RBP19.9■□□□□ 0.78
ACTB-202ENST00000414620 UBE3BQ7Z3V4 1068 aa19.9■□□□□ 0.78
ACTB-202ENST00000414620 WDR63Q8IWG1 891 aa19.9■□□□□ 0.78
ACTB-202ENST00000414620 SPINK5Q9NQ38 1064 aaPredicted RBP19.9■□□□□ 0.78
ACTB-202ENST00000414620 PCNTO95613 3336 aa19.9■□□□□ 0.78
ACTB-202ENST00000414620 A0A1B0GUL6 1792 aa19.9■□□□□ 0.78
ACTB-202ENST00000414620 G3V3G9 751 aa19.89■□□□□ 0.77
ACTB-202ENST00000414620 H7C1D1 291 aa19.89■□□□□ 0.77
ACTB-202ENST00000414620 VAMP4O75379 141 aa19.89■□□□□ 0.77
ACTB-202ENST00000414620 DCAF8Q5TAQ9 597 aa19.89■□□□□ 0.77
ACTB-202ENST00000414620 ZC3H12CQ9C0D7 883 aaKnown RBP19.89■□□□□ 0.77
ACTB-202ENST00000414620 THSD7BQ9C0I4 1608 aa19.89■□□□□ 0.77
ACTB-202ENST00000414620 GREM2Q9H772 168 aa19.89■□□□□ 0.77
ACTB-202ENST00000414620 PODXL2Q9NZ53 605 aa19.89■□□□□ 0.77
ACTB-202ENST00000414620 ZNF646O15015 1829 aaPredicted RBP19.88■□□□□ 0.77
ACTB-202ENST00000414620 FOXN1O15353 648 aa19.88■□□□□ 0.77
ACTB-202ENST00000414620 GRM1Q13255 1194 aa19.88■□□□□ 0.77
ACTB-202ENST00000414620 CST9Q5W186 159 aa19.88■□□□□ 0.77
ACTB-202ENST00000414620 SAMD7Q7Z3H4 446 aa19.88■□□□□ 0.77
ACTB-202ENST00000414620 TTLL11Q8NHH1 800 aa19.88■□□□□ 0.77
ACTB-202ENST00000414620 CDC5LQ99459 802 aaKnown RBP19.88■□□□□ 0.77
ACTB-202ENST00000414620 XDHP47989 1333 aa19.87■□□□□ 0.77
ACTB-202ENST00000414620 WDR33Q9C0J8 1336 aaKnown RBP19.87■□□□□ 0.77
ACTB-202ENST00000414620 TBC1D10BQ4KMP7 808 aaPredicted RBP19.87■□□□□ 0.77
ACTB-202ENST00000414620 TNS4Q8IZW8 715 aa19.87■□□□□ 0.77
ACTB-202ENST00000414620 DNAAF4Q8WXU2 420 aa19.87■□□□□ 0.77
ACTB-202ENST00000414620 ZNF408Q9H9D4 720 aa19.87■□□□□ 0.77
ACTB-202ENST00000414620 H7C1W4 665 aa19.86■□□□□ 0.77
ACTB-202ENST00000414620 CELF2O95319 508 aaKnown RBP19.86■□□□□ 0.77
ACTB-202ENST00000414620 EGFRP00533 1210 aa19.86■□□□□ 0.77
ACTB-202ENST00000414620 GCKRQ14397 625 aa19.86■□□□□ 0.77
ACTB-202ENST00000414620 RBM26Q5T8P6 1007 aaKnown RBP19.86■□□□□ 0.77
ACTB-202ENST00000414620 WTIPA6NIX2 430 aaPredicted RBP19.85■□□□□ 0.77
ACTB-202ENST00000414620 CYP4F22Q6NT55 531 aa19.85■□□□□ 0.77
ACTB-202ENST00000414620 DPF2Q92785 391 aa19.85■□□□□ 0.77
ACTB-202ENST00000414620 AIDAQ96BJ3 306 aa19.85■□□□□ 0.77
ACTB-202ENST00000414620 PGAP2Q9UHJ9 254 aa19.85■□□□□ 0.77
ACTB-202ENST00000414620 F6X3S4 739 aa19.84■□□□□ 0.77
ACTB-202ENST00000414620 CAPN15O75808 1086 aa19.84■□□□□ 0.77
ACTB-202ENST00000414620 ATP2B4P23634 1241 aa19.84■□□□□ 0.77
ACTB-202ENST00000414620 FAM161AQ3B820 660 aa19.84■□□□□ 0.77
ACTB-202ENST00000414620 DLK2Q6UY11 383 aa19.84■□□□□ 0.77
ACTB-202ENST00000414620 CAPNS2Q96L46 248 aa19.84■□□□□ 0.77
ACTB-202ENST00000414620 MYH16Q9H6N6 1097 aa19.84■□□□□ 0.77
ACTB-202ENST00000414620 TLL2Q9Y6L7 1015 aa19.84■□□□□ 0.77
ACTB-202ENST00000414620 RPS12P25398 132 aaKnown RBP19.83■□□□□ 0.77
ACTB-202ENST00000414620 CASP7P55210 303 aa19.83■□□□□ 0.77
ACTB-202ENST00000414620 USP48Q86UV5 1035 aa19.83■□□□□ 0.77
ACTB-202ENST00000414620 ZC3H15Q8WU90 426 aaKnown RBP19.83■□□□□ 0.77
ACTB-202ENST00000414620 VIL1P09327 827 aaKnown RBP19.82■□□□□ 0.76
ACTB-202ENST00000414620 KIF4BQ2VIQ3 1234 aa19.82■□□□□ 0.76
ACTB-202ENST00000414620 CDC37L1Q7L3B6 337 aa19.82■□□□□ 0.76
ACTB-202ENST00000414620 LINS1Q8NG48 757 aa19.82■□□□□ 0.76
ACTB-202ENST00000414620 BSDC1Q9NW68 430 aaPredicted RBP19.82■□□□□ 0.76
ACTB-202ENST00000414620 MINPP1Q9UNW1 487 aa19.82■□□□□ 0.76
ACTB-202ENST00000414620 ITGA6P23229 1130 aa19.81■□□□□ 0.76
ACTB-202ENST00000414620 IGHMBP2P38935 993 aaKnown RBP19.81■□□□□ 0.76
ACTB-202ENST00000414620 PLA2G12BQ9BX93 195 aa19.81■□□□□ 0.76
ACTB-202ENST00000414620 WBP1LQ9NX94 342 aa19.81■□□□□ 0.76
ACTB-202ENST00000414620 MED23Q9ULK4 1368 aa19.81■□□□□ 0.76
ACTB-202ENST00000414620 ADM5C9JUS6 153 aa19.8■□□□□ 0.76
ACTB-202ENST00000414620 ECE1P42892 770 aa19.8■□□□□ 0.76
ACTB-202ENST00000414620 CCT4P50991 539 aaKnown RBP19.8■□□□□ 0.76
ACTB-202ENST00000414620 ASTN2O75129 1339 aaPredicted RBP19.79■□□□□ 0.76
ACTB-202ENST00000414620 CTCFP49711 727 aaPredicted RBP19.79■□□□□ 0.76
ACTB-202ENST00000414620 RSBN1LQ6PCB5 846 aaPredicted RBP19.79■□□□□ 0.76
ACTB-202ENST00000414620 FBXW7Q969H0 707 aa19.79■□□□□ 0.76
ACTB-202ENST00000414620 AOC2O75106 756 aa19.78■□□□□ 0.76
ACTB-202ENST00000414620 LBX1P52954 281 aa19.78■□□□□ 0.76
ACTB-202ENST00000414620 KRT26Q7Z3Y9 468 aa19.78■□□□□ 0.76
ACTB-202ENST00000414620 SAPCD2Q86UD0 394 aa19.78■□□□□ 0.76
ACTB-202ENST00000414620 DCPSQ96C86 337 aaKnown RBP19.78■□□□□ 0.76
ACTB-202ENST00000414620 MPHOSPH8Q99549 860 aa19.78■□□□□ 0.76
ACTB-202ENST00000414620 GGA3Q9NZ52 723 aa19.78■□□□□ 0.76
ACTB-202ENST00000414620 CHMP3Q9Y3E7 222 aa19.78■□□□□ 0.76
ACTB-202ENST00000414620 ZNF609O15014 1411 aa19.77■□□□□ 0.76
ACTB-202ENST00000414620 CSF1RP07333 972 aa19.77■□□□□ 0.76
ACTB-202ENST00000414620 KLRK1P26718 216 aa19.77■□□□□ 0.76
ACTB-202ENST00000414620 MAP2K1Q02750 393 aaPredicted RBP19.77■□□□□ 0.76
ACTB-202ENST00000414620 BEND3Q5T5X7 828 aa19.77■□□□□ 0.76
ACTB-202ENST00000414620 MXD3Q9BW11 206 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms