RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 ZNF594Q96JF6 807 aaPredicted RBP9.72□□□□□ -0.85
CPSF4-202ENST00000412686 LTBP3Q9NS15 1303 aa9.72□□□□□ -0.85
CPSF4-202ENST00000412686 UTRNP46939 3433 aa9.72□□□□□ -0.85
CPSF4-202ENST00000412686 WTIPA6NIX2 430 aaPredicted RBP9.71□□□□□ -0.86
CPSF4-202ENST00000412686 UBTFL1P0CB47 393 aaPredicted RBP9.71□□□□□ -0.86
CPSF4-202ENST00000412686 IARSP41252 1262 aaKnown RBP9.71□□□□□ -0.86
CPSF4-202ENST00000412686 RABL6Q3YEC7 729 aaPredicted RBP9.71□□□□□ -0.86
CPSF4-202ENST00000412686 CC2D2BQ6DHV5 1058 aa9.71□□□□□ -0.86
CPSF4-202ENST00000412686 RTKN2Q8IZC4 609 aa9.71□□□□□ -0.86
CPSF4-202ENST00000412686 CDC5LQ99459 802 aaKnown RBP9.71□□□□□ -0.86
CPSF4-202ENST00000412686 NSFL1CQ9UNZ2 370 aaKnown RBP9.71□□□□□ -0.86
CPSF4-202ENST00000412686 LRRFIP2Q9Y608 721 aaKnown RBP9.71□□□□□ -0.86
CPSF4-202ENST00000412686 ANKRD18BA2A2Z9 1011 aa9.7□□□□□ -0.86
CPSF4-202ENST00000412686 IFIT5Q13325 482 aaKnown RBP9.7□□□□□ -0.86
CPSF4-202ENST00000412686 AOC3Q16853 763 aa9.7□□□□□ -0.86
CPSF4-202ENST00000412686 C20orf194Q5TEA3 1177 aa9.7□□□□□ -0.86
CPSF4-202ENST00000412686 DPP8Q6V1X1 898 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-202ENST00000412686 ITPRIPQ8IWB1 547 aa9.7□□□□□ -0.86
CPSF4-202ENST00000412686 FTSJ3Q8IY81 847 aaKnown RBP9.7□□□□□ -0.86
CPSF4-202ENST00000412686 REM2Q8IYK8 340 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-202ENST00000412686 DZIP1LQ8IYY4 767 aaKnown RBP9.7□□□□□ -0.86
CPSF4-202ENST00000412686 MPNDQ8N594 471 aa9.7□□□□□ -0.86
CPSF4-202ENST00000412686 ZNF784Q8NCA9 323 aaPredicted RBP9.7□□□□□ -0.86
CPSF4-202ENST00000412686 KLHDC4Q8TBB5 520 aa9.7□□□□□ -0.86
CPSF4-202ENST00000412686 PSMD1Q99460 953 aa9.7□□□□□ -0.86
CPSF4-202ENST00000412686 POLLQ9UGP5 575 aa9.7□□□□□ -0.86
CPSF4-202ENST00000412686 PPIP5K2O43314 1243 aa9.69□□□□□ -0.86
CPSF4-202ENST00000412686 IGHMBP2P38935 993 aaKnown RBP9.69□□□□□ -0.86
CPSF4-202ENST00000412686 TMC4Q7Z404 712 aa9.69□□□□□ -0.86
CPSF4-202ENST00000412686 MPHOSPH8Q99549 860 aa9.69□□□□□ -0.86
CPSF4-202ENST00000412686 RTFDC1Q9BY42 306 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-202ENST00000412686 PUS3Q9BZE2 481 aaKnown RBP9.69□□□□□ -0.86
CPSF4-202ENST00000412686 TMX4Q9H1E5 349 aaPredicted RBP9.69□□□□□ -0.86
CPSF4-202ENST00000412686 C1orf115Q9H7X2 142 aa9.69□□□□□ -0.86
CPSF4-202ENST00000412686 MINPP1Q9UNW1 487 aa9.69□□□□□ -0.86
CPSF4-202ENST00000412686 ZNF541Q9H0D2 1346 aa9.68□□□□□ -0.86
CPSF4-202ENST00000412686 C6orf229H3BNL8 230 aa9.68□□□□□ -0.86
CPSF4-202ENST00000412686 SNAP23O00161 211 aa9.68□□□□□ -0.86
CPSF4-202ENST00000412686 RIMBP2O15034 1052 aa9.68□□□□□ -0.86
CPSF4-202ENST00000412686 UFL1O94874 794 aa9.68□□□□□ -0.86
CPSF4-202ENST00000412686 KLRK1P26718 216 aa9.68□□□□□ -0.86
CPSF4-202ENST00000412686 CCDC57Q2TAC2 916 aa9.68□□□□□ -0.86
CPSF4-202ENST00000412686 TAF7LQ5H9L4 462 aa9.68□□□□□ -0.86
CPSF4-202ENST00000412686 LARGE2Q8N3Y3 721 aa9.68□□□□□ -0.86
CPSF4-202ENST00000412686 HELBQ8NG08 1087 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-202ENST00000412686 TBC1D16Q8TBP0 767 aa9.68□□□□□ -0.86
CPSF4-202ENST00000412686 BSDC1Q9NW68 430 aaPredicted RBP9.68□□□□□ -0.86
CPSF4-202ENST00000412686 ANKIB1Q9P2G1 1089 aa9.68□□□□□ -0.86
CPSF4-202ENST00000412686 COG6Q9Y2V7 657 aa9.68□□□□□ -0.86
CPSF4-202ENST00000412686 TAF5LO75529 589 aa9.67□□□□□ -0.86
CPSF4-202ENST00000412686 RFX5P48382 616 aaPredicted RBP9.67□□□□□ -0.86
CPSF4-202ENST00000412686 CHRNDQ07001 517 aa9.67□□□□□ -0.86
CPSF4-202ENST00000412686 LRRC24Q50LG9 513 aa9.67□□□□□ -0.86
CPSF4-202ENST00000412686 PODXL2Q9NZ53 605 aa9.67□□□□□ -0.86
CPSF4-202ENST00000412686 XDHP47989 1333 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 YDJCA8MPS7 323 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 ZBTB7BO15156 539 aaPredicted RBP9.66□□□□□ -0.86
CPSF4-202ENST00000412686 DDNO94850 711 aaPredicted RBP9.66□□□□□ -0.86
CPSF4-202ENST00000412686 GNAI3P08754 354 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 KIAA2012Q0VF49 1180 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 MVPQ14764 893 aaKnown RBP9.66□□□□□ -0.86
CPSF4-202ENST00000412686 DOK7Q18PE1 504 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 WASHC4Q2M389 1173 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 GRIPAP1Q4V328 841 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 LDHAL6AQ6ZMR3 332 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 TXNRD3Q86VQ6 643 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 NIM1KQ8IY84 436 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 SUPT20HQ8NEM7 779 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 DBNDD1Q9H9R9 158 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 NMRK2Q9NPI5 230 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 CNNM1Q9NRU3 951 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 GGA1Q9UJY5 639 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 PA2G4Q9UQ80 394 aaKnown RBP9.66□□□□□ -0.86
CPSF4-202ENST00000412686 SCN9AQ15858 1988 aa9.66□□□□□ -0.86
CPSF4-202ENST00000412686 ZC3H4Q9UPT8 1303 aaKnown RBP9.65□□□□□ -0.86
CPSF4-202ENST00000412686 PNMA6EA0A0J9YXQ4 647 aa9.65□□□□□ -0.86
CPSF4-202ENST00000412686 FZD9O00144 591 aa9.65□□□□□ -0.86
CPSF4-202ENST00000412686 GNAI2P04899 355 aa9.65□□□□□ -0.86
CPSF4-202ENST00000412686 ATP2B4P23634 1241 aa9.65□□□□□ -0.86
CPSF4-202ENST00000412686 PTPN12Q05209 780 aaKnown RBP9.65□□□□□ -0.86
CPSF4-202ENST00000412686 SIL1Q9H173 461 aa9.65□□□□□ -0.86
CPSF4-202ENST00000412686 GPBP1L1Q9HC44 474 aaPredicted RBP9.65□□□□□ -0.86
CPSF4-202ENST00000412686 RIPOR2Q9Y4F9 1068 aa9.65□□□□□ -0.86
CPSF4-202ENST00000412686 ZNF804BA4D1E1 1349 aa9.64□□□□□ -0.87
CPSF4-202ENST00000412686 ZNF646O15015 1829 aaPredicted RBP9.64□□□□□ -0.87
CPSF4-202ENST00000412686 GLTPD2A6NH11 291 aa9.64□□□□□ -0.87
CPSF4-202ENST00000412686 SRGAP3O43295 1099 aa9.64□□□□□ -0.87
CPSF4-202ENST00000412686 RRP1P56182 461 aaKnown RBP9.64□□□□□ -0.87
CPSF4-202ENST00000412686 JDP2Q8WYK2 163 aa9.64□□□□□ -0.87
CPSF4-202ENST00000412686 EYA3Q99504 573 aa9.64□□□□□ -0.87
CPSF4-202ENST00000412686 KCNQ5Q9NR82 932 aa9.64□□□□□ -0.87
CPSF4-202ENST00000412686 GJA3Q9Y6H8 435 aa9.64□□□□□ -0.87
CPSF4-202ENST00000412686 WDR90Q96KV7 1748 aa9.64□□□□□ -0.87
CPSF4-202ENST00000412686 MED23Q9ULK4 1368 aa9.63□□□□□ -0.87
CPSF4-202ENST00000412686 IRS2Q9Y4H2 1338 aa9.63□□□□□ -0.87
CPSF4-202ENST00000412686 POTECB2RU33 542 aa9.63□□□□□ -0.87
CPSF4-202ENST00000412686 EYA2O00167 538 aa9.63□□□□□ -0.87
CPSF4-202ENST00000412686 KIF3CO14782 793 aa9.63□□□□□ -0.87
CPSF4-202ENST00000412686 ECE2O60344 883 aa9.63□□□□□ -0.87
CPSF4-202ENST00000412686 RAD17O75943 681 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms