RNA–Protein interactions for RNA: ENST00000408314.1

SNORD88A-201, Transcript of small nucleolar RNA, C/D box 88A, humanhuman

BASIC

Gene SNORD88A, Length 91 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88A-201ENST00000408314 ECE2O60344 883 aa11.53□□□□□ -0.56
SNORD88A-201ENST00000408314 RAD17O75943 681 aa11.53□□□□□ -0.56
SNORD88A-201ENST00000408314 EPS15P42566 896 aa11.53□□□□□ -0.56
SNORD88A-201ENST00000408314 HTRA3P83110 453 aa11.53□□□□□ -0.56
SNORD88A-201ENST00000408314 ZC3H15Q8WU90 426 aaKnown RBP11.53□□□□□ -0.56
SNORD88A-201ENST00000408314 BSDC1Q9NW68 430 aaPredicted RBP11.53□□□□□ -0.56
SNORD88A-201ENST00000408314 POLLQ9UGP5 575 aa11.53□□□□□ -0.56
SNORD88A-201ENST00000408314 ZNF521Q96K83 1311 aa11.53□□□□□ -0.56
SNORD88A-201ENST00000408314 RIMBP2O15034 1052 aa11.52□□□□□ -0.57
SNORD88A-201ENST00000408314 ALDH1L1O75891 902 aa11.52□□□□□ -0.57
SNORD88A-201ENST00000408314 ITGBL1O95965 494 aaPredicted RBP11.52□□□□□ -0.57
SNORD88A-201ENST00000408314 MAP1SQ66K74 1059 aaPredicted RBP11.52□□□□□ -0.57
SNORD88A-201ENST00000408314 SLC51AQ86UW1 340 aa11.52□□□□□ -0.57
SNORD88A-201ENST00000408314 CCDC85AQ96PX6 553 aaPredicted RBP11.52□□□□□ -0.57
SNORD88A-201ENST00000408314 MPHOSPH8Q99549 860 aa11.52□□□□□ -0.57
SNORD88A-201ENST00000408314 ANKRD2Q9GZV1 360 aa11.52□□□□□ -0.57
SNORD88A-201ENST00000408314 GREM2Q9H772 168 aa11.52□□□□□ -0.57
SNORD88A-201ENST00000408314 DBNDD1Q9H9R9 158 aa11.52□□□□□ -0.57
SNORD88A-201ENST00000408314 CNTNAP1P78357 1384 aa11.52□□□□□ -0.57
SNORD88A-201ENST00000408314 MED23Q9ULK4 1368 aa11.52□□□□□ -0.57
SNORD88A-201ENST00000408314 ZNF609O15014 1411 aa11.52□□□□□ -0.57
SNORD88A-201ENST00000408314 ANKRD18BA2A2Z9 1011 aa11.51□□□□□ -0.57
SNORD88A-201ENST00000408314 YDJCA8MPS7 323 aa11.51□□□□□ -0.57
SNORD88A-201ENST00000408314 JARID2Q92833 1246 aaPredicted RBP11.51□□□□□ -0.57
SNORD88A-201ENST00000408314 CNOT7Q9UIV1 285 aaKnown RBP11.51□□□□□ -0.57
SNORD88A-201ENST00000408314 PSMD14O00487 310 aa11.5□□□□□ -0.57
SNORD88A-201ENST00000408314 CT47B1P0C2W7 299 aaPredicted RBP11.5□□□□□ -0.57
SNORD88A-201ENST00000408314 ITGA6P23229 1130 aa11.5□□□□□ -0.57
SNORD88A-201ENST00000408314 BEND3Q5T5X7 828 aa11.5□□□□□ -0.57
SNORD88A-201ENST00000408314 PODNQ7Z5L7 613 aa11.5□□□□□ -0.57
SNORD88A-201ENST00000408314 MICALL2Q8IY33 904 aa11.5□□□□□ -0.57
SNORD88A-201ENST00000408314 AGBL3Q8NEM8 1001 aa11.5□□□□□ -0.57
SNORD88A-201ENST00000408314 SRCIN1Q9C0H9 1055 aa11.5□□□□□ -0.57
SNORD88A-201ENST00000408314 SPINK5Q9NQ38 1064 aaPredicted RBP11.5□□□□□ -0.57
SNORD88A-201ENST00000408314 C9orf78Q9NZ63 289 aaPredicted RBP11.5□□□□□ -0.57
SNORD88A-201ENST00000408314 ABT1Q9ULW3 272 aaKnown RBP11.5□□□□□ -0.57
SNORD88A-201ENST00000408314 LEMD3Q9Y2U8 911 aa11.5□□□□□ -0.57
SNORD88A-201ENST00000408314 PTPRCP08575 1304 aa11.5□□□□□ -0.57
SNORD88A-201ENST00000408314 GRM8O00222 908 aa11.49□□□□□ -0.57
SNORD88A-201ENST00000408314 CSF1RP07333 972 aa11.49□□□□□ -0.57
SNORD88A-201ENST00000408314 ECE1P42892 770 aa11.49□□□□□ -0.57
SNORD88A-201ENST00000408314 KCNJ4P48050 445 aa11.49□□□□□ -0.57
SNORD88A-201ENST00000408314 MMP14P50281 582 aa11.49□□□□□ -0.57
SNORD88A-201ENST00000408314 CCT4P50991 539 aaKnown RBP11.49□□□□□ -0.57
SNORD88A-201ENST00000408314 CASP7P55210 303 aa11.49□□□□□ -0.57
SNORD88A-201ENST00000408314 IFIT5Q13325 482 aaKnown RBP11.49□□□□□ -0.57
SNORD88A-201ENST00000408314 DOK7Q18PE1 504 aa11.49□□□□□ -0.57
SNORD88A-201ENST00000408314 FAM161AQ3B820 660 aa11.49□□□□□ -0.57
SNORD88A-201ENST00000408314 CDC37L1Q7L3B6 337 aa11.49□□□□□ -0.57
SNORD88A-201ENST00000408314 MKRN1Q9UHC7 482 aaKnown RBP11.49□□□□□ -0.57
SNORD88A-201ENST00000408314 PGAP2Q9UHJ9 254 aa11.49□□□□□ -0.57
SNORD88A-201ENST00000408314 MYO3BQ8WXR4 1341 aa11.49□□□□□ -0.57
SNORD88A-201ENST00000408314 RASSF10A6NK89 507 aa11.48□□□□□ -0.57
SNORD88A-201ENST00000408314 F6X3S4 739 aa11.48□□□□□ -0.57
SNORD88A-201ENST00000408314 VIL1P09327 827 aaKnown RBP11.48□□□□□ -0.57
SNORD88A-201ENST00000408314 CCDC57Q2TAC2 916 aa11.48□□□□□ -0.57
SNORD88A-201ENST00000408314 ALDH1L2Q3SY69 923 aa11.48□□□□□ -0.57
SNORD88A-201ENST00000408314 TAF7LQ5H9L4 462 aa11.48□□□□□ -0.57
SNORD88A-201ENST00000408314 SLC4A10Q6U841 1118 aa11.48□□□□□ -0.57
SNORD88A-201ENST00000408314 AIDAQ96BJ3 306 aa11.48□□□□□ -0.57
SNORD88A-201ENST00000408314 COA1Q9GZY4 146 aa11.48□□□□□ -0.57
SNORD88A-201ENST00000408314 MINPP1Q9UNW1 487 aa11.48□□□□□ -0.57
SNORD88A-201ENST00000408314 CHMP3Q9Y3E7 222 aa11.48□□□□□ -0.57
SNORD88A-201ENST00000408314 COL4A1P02462 1669 aa11.48□□□□□ -0.57
SNORD88A-201ENST00000408314 TRPM7Q96QT4 1865 aa11.48□□□□□ -0.57
SNORD88A-201ENST00000408314 SPEF2Q9C093 1822 aa11.47□□□□□ -0.57
SNORD88A-201ENST00000408314 ZNF804BA4D1E1 1349 aa11.47□□□□□ -0.57
SNORD88A-201ENST00000408314 USP17L3A6NCW0 530 aa11.47□□□□□ -0.57
SNORD88A-201ENST00000408314 USP17L4A6NCW7 530 aa11.47□□□□□ -0.57
SNORD88A-201ENST00000408314 DEFB115Q30KQ5 88 aa11.47□□□□□ -0.57
SNORD88A-201ENST00000408314 RSBN1LQ6PCB5 846 aaPredicted RBP11.47□□□□□ -0.57
SNORD88A-201ENST00000408314 USP17L1Q7RTZ2 530 aa11.47□□□□□ -0.57
SNORD88A-201ENST00000408314 DCPSQ96C86 337 aaKnown RBP11.47□□□□□ -0.57
SNORD88A-201ENST00000408314 GPR101Q96P66 508 aaPredicted RBP11.47□□□□□ -0.57
SNORD88A-201ENST00000408314 ZBTB12Q9Y330 459 aaPredicted RBP11.47□□□□□ -0.57
SNORD88A-201ENST00000408314 PSME4Q14997 1843 aa11.46□□□□□ -0.57
SNORD88A-201ENST00000408314 HSPA1AP0DMV8 641 aaKnown RBP11.46□□□□□ -0.57
SNORD88A-201ENST00000408314 HSPA1BP0DMV9 641 aaKnown RBP11.46□□□□□ -0.57
SNORD88A-201ENST00000408314 SLFN5Q08AF3 891 aa11.46□□□□□ -0.57
SNORD88A-201ENST00000408314 KIF4BQ2VIQ3 1234 aa11.46□□□□□ -0.57
SNORD88A-201ENST00000408314 OGFOD1Q8N543 542 aa11.46□□□□□ -0.57
SNORD88A-201ENST00000408314 TRPM4Q8TD43 1214 aa11.46□□□□□ -0.57
SNORD88A-201ENST00000408314 CELF2O95319 508 aaKnown RBP11.45□□□□□ -0.58
SNORD88A-201ENST00000408314 USP17L8P0C7I0 530 aa11.45□□□□□ -0.58
SNORD88A-201ENST00000408314 MAP2K1Q02750 393 aaPredicted RBP11.45□□□□□ -0.58
SNORD88A-201ENST00000408314 CHRNDQ07001 517 aa11.45□□□□□ -0.58
SNORD88A-201ENST00000408314 TBC1D10BQ4KMP7 808 aaPredicted RBP11.45□□□□□ -0.58
SNORD88A-201ENST00000408314 STRIP1Q5VSL9 837 aa11.45□□□□□ -0.58
SNORD88A-201ENST00000408314 LMBR1LQ6UX01 489 aa11.45□□□□□ -0.58
SNORD88A-201ENST00000408314 PAXIP1Q6ZW49 1069 aaPredicted RBP11.45□□□□□ -0.58
SNORD88A-201ENST00000408314 SULF1Q8IWU6 871 aa11.45□□□□□ -0.58
SNORD88A-201ENST00000408314 MRPL50Q8N5N7 158 aaKnown RBP11.45□□□□□ -0.58
SNORD88A-201ENST00000408314 HHIPL1Q96JK4 782 aa11.45□□□□□ -0.58
SNORD88A-201ENST00000408314 HDAC5Q9UQL6 1122 aa11.45□□□□□ -0.58
SNORD88A-201ENST00000408314 VEGFBP49765 207 aa11.44□□□□□ -0.58
SNORD88A-201ENST00000408314 ZNF280AP59817 542 aaPredicted RBP11.44□□□□□ -0.58
SNORD88A-201ENST00000408314 FOXO4P98177 505 aa11.44□□□□□ -0.58
SNORD88A-201ENST00000408314 SAMD7Q7Z3H4 446 aa11.44□□□□□ -0.58
SNORD88A-201ENST00000408314 KRT26Q7Z3Y9 468 aa11.44□□□□□ -0.58
SNORD88A-201ENST00000408314 ZNF804AQ7Z570 1209 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms