RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 CHMP4CQ96CF2 233 aa12.67□□□□□ -0.38
CLIP4-204ENST00000404424 C19orf44Q9H6X5 657 aa12.67□□□□□ -0.38
CLIP4-204ENST00000404424 MEGF6O75095 1541 aa12.67□□□□□ -0.38
CLIP4-204ENST00000404424 AFDNP55196 1824 aaKnown RBP12.66□□□□□ -0.38
CLIP4-204ENST00000404424 JAK2O60674 1132 aa12.66□□□□□ -0.38
CLIP4-204ENST00000404424 PFKFB2O60825 505 aa12.66□□□□□ -0.38
CLIP4-204ENST00000404424 ANO6Q4KMQ2 910 aa12.66□□□□□ -0.38
CLIP4-204ENST00000404424 PROSER2Q86WR7 435 aaPredicted RBP12.66□□□□□ -0.38
CLIP4-204ENST00000404424 TDRD7Q8NHU6 1098 aaKnown RBP12.66□□□□□ -0.38
CLIP4-204ENST00000404424 BICD2Q8TD16 824 aa12.66□□□□□ -0.38
CLIP4-204ENST00000404424 DSCC1Q9BVC3 393 aa12.66□□□□□ -0.38
CLIP4-204ENST00000404424 CBX8Q9HC52 389 aa12.66□□□□□ -0.38
CLIP4-204ENST00000404424 ATL3Q6DD88 541 aa12.66□□□□□ -0.38
CLIP4-204ENST00000404424 NAA16Q6N069 864 aaPredicted RBP12.66□□□□□ -0.38
CLIP4-204ENST00000404424 DHX32Q7L7V1 743 aaKnown RBP12.66□□□□□ -0.38
CLIP4-204ENST00000404424 CKAP2LQ8IYA6 745 aa12.66□□□□□ -0.38
CLIP4-204ENST00000404424 PGBD1Q96JS3 809 aa12.66□□□□□ -0.38
CLIP4-204ENST00000404424 TMEM94Q12767 1356 aa12.65□□□□□ -0.38
CLIP4-204ENST00000404424 NR1I2O75469 434 aa12.65□□□□□ -0.38
CLIP4-204ENST00000404424 FGD1P98174 961 aa12.65□□□□□ -0.38
CLIP4-204ENST00000404424 SCRN1Q12765 414 aa12.65□□□□□ -0.38
CLIP4-204ENST00000404424 CCDC129Q6ZRS4 1044 aa12.65□□□□□ -0.38
CLIP4-204ENST00000404424 LUZP1Q86V48 1076 aa12.65□□□□□ -0.38
CLIP4-204ENST00000404424 SPC24Q8NBT2 197 aa12.65□□□□□ -0.38
CLIP4-204ENST00000404424 ARFGEF2Q9Y6D5 1785 aa12.65□□□□□ -0.38
CLIP4-204ENST00000404424 H7C1W4 665 aa12.65□□□□□ -0.38
CLIP4-204ENST00000404424 CHAF1AQ13111 956 aaPredicted RBP12.65□□□□□ -0.38
CLIP4-204ENST00000404424 LMBR1LQ6UX01 489 aa12.65□□□□□ -0.38
CLIP4-204ENST00000404424 C17orf53Q8N3J3 647 aaPredicted RBP12.65□□□□□ -0.38
CLIP4-204ENST00000404424 JARID2Q92833 1246 aaPredicted RBP12.65□□□□□ -0.38
CLIP4-204ENST00000404424 SEC62Q99442 399 aaKnown RBP12.65□□□□□ -0.38
CLIP4-204ENST00000404424 AGXT2Q9BYV1 514 aa12.65□□□□□ -0.38
CLIP4-204ENST00000404424 ATP5J2-PTCD1G3V325 749 aa12.64□□□□□ -0.39
CLIP4-204ENST00000404424 CTAGE5O15320 804 aa12.64□□□□□ -0.39
CLIP4-204ENST00000404424 CYP27B1O15528 508 aa12.64□□□□□ -0.39
CLIP4-204ENST00000404424 PTCD1O75127 700 aaKnown RBP12.64□□□□□ -0.39
CLIP4-204ENST00000404424 CSB-PGBD3P0DP91 1061 aa12.64□□□□□ -0.39
CLIP4-204ENST00000404424 CABP4P57796 275 aa12.64□□□□□ -0.39
CLIP4-204ENST00000404424 DDX46Q7L014 1031 aaKnown RBP12.64□□□□□ -0.39
CLIP4-204ENST00000404424 PLA2G4DQ86XP0 818 aa12.64□□□□□ -0.39
CLIP4-204ENST00000404424 PYCARDQ9ULZ3 195 aa12.64□□□□□ -0.39
CLIP4-204ENST00000404424 COL18A1P39060 1754 aa12.64□□□□□ -0.39
CLIP4-204ENST00000404424 IL15P40933 162 aaPredicted RBP12.64□□□□□ -0.39
CLIP4-204ENST00000404424 ZNF165P49910 485 aa12.64□□□□□ -0.39
CLIP4-204ENST00000404424 FOXO4P98177 505 aa12.64□□□□□ -0.39
CLIP4-204ENST00000404424 PAG1Q9NWQ8 432 aa12.64□□□□□ -0.39
CLIP4-204ENST00000404424 NDUFB9Q9Y6M9 179 aa12.64□□□□□ -0.39
CLIP4-204ENST00000404424 ZNF75DP51815 510 aa12.63□□□□□ -0.39
CLIP4-204ENST00000404424 EXOSC10Q01780 885 aaKnown RBP12.63□□□□□ -0.39
CLIP4-204ENST00000404424 ZMYM1Q5SVZ6 1142 aa12.63□□□□□ -0.39
CLIP4-204ENST00000404424 NSUN7Q8NE18 718 aaKnown RBP12.63□□□□□ -0.39
CLIP4-204ENST00000404424 RCOR1Q9UKL0 485 aa12.63□□□□□ -0.39
CLIP4-204ENST00000404424 PKD1L3Q7Z443 1732 aa12.63□□□□□ -0.39
CLIP4-204ENST00000404424 LAMB4A4D0S4 1761 aa12.63□□□□□ -0.39
CLIP4-204ENST00000404424 STOX1Q6ZVD7 989 aa12.63□□□□□ -0.39
CLIP4-204ENST00000404424 TRIM5Q9C035 493 aa12.63□□□□□ -0.39
CLIP4-204ENST00000404424 ATG3Q9NT62 314 aa12.63□□□□□ -0.39
CLIP4-204ENST00000404424 CDC25BP30305 580 aa12.62□□□□□ -0.39
CLIP4-204ENST00000404424 PIP4K2AP48426 406 aaPredicted RBP12.62□□□□□ -0.39
CLIP4-204ENST00000404424 ATG9AQ7Z3C6 839 aa12.62□□□□□ -0.39
CLIP4-204ENST00000404424 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.62□□□□□ -0.39
CLIP4-204ENST00000404424 DDX11Q96FC9 970 aa12.62□□□□□ -0.39
CLIP4-204ENST00000404424 ZNF274Q96GC6 653 aaPredicted RBP12.62□□□□□ -0.39
CLIP4-204ENST00000404424 ZNF396Q96N95 335 aaPredicted RBP12.62□□□□□ -0.39
CLIP4-204ENST00000404424 CWC25Q9NXE8 425 aaPredicted RBP12.62□□□□□ -0.39
CLIP4-204ENST00000404424 GOLIM4O00461 696 aa12.62□□□□□ -0.39
CLIP4-204ENST00000404424 PTGS1P23219 599 aa12.62□□□□□ -0.39
CLIP4-204ENST00000404424 ADD1P35611 737 aaKnown RBP12.62□□□□□ -0.39
CLIP4-204ENST00000404424 CCDC186Q7Z3E2 898 aa12.62□□□□□ -0.39
CLIP4-204ENST00000404424 DRC7Q8IY82 874 aa12.62□□□□□ -0.39
CLIP4-204ENST00000404424 FBXL16Q8N461 479 aa12.62□□□□□ -0.39
CLIP4-204ENST00000404424 NEUROD6Q96NK8 337 aa12.62□□□□□ -0.39
CLIP4-204ENST00000404424 PTPDC1A2A3K4 754 aa12.61□□□□□ -0.39
CLIP4-204ENST00000404424 CHGBP05060 677 aa12.61□□□□□ -0.39
CLIP4-204ENST00000404424 LRRFIP1Q32MZ4 808 aaKnown RBP12.61□□□□□ -0.39
CLIP4-204ENST00000404424 DNAJC25Q9H1X3 360 aa12.61□□□□□ -0.39
CLIP4-204ENST00000404424 ADAMTSL3P82987 1691 aa12.61□□□□□ -0.39
CLIP4-204ENST00000404424 SALL1Q9NSC2 1324 aa12.61□□□□□ -0.39
CLIP4-204ENST00000404424 CIAO1O76071 339 aa12.61□□□□□ -0.39
CLIP4-204ENST00000404424 HSPD1P10809 573 aaKnown RBP12.61□□□□□ -0.39
CLIP4-204ENST00000404424 SARM1Q6SZW1 724 aa12.61□□□□□ -0.39
CLIP4-204ENST00000404424 LRRC2Q9BYS8 371 aa12.61□□□□□ -0.39
CLIP4-204ENST00000404424 ZMYND15Q9H091 742 aa12.61□□□□□ -0.39
CLIP4-204ENST00000404424 SPEF2Q9C093 1822 aa12.6□□□□□ -0.39
CLIP4-204ENST00000404424 PARP4Q9UKK3 1724 aaKnown RBP12.6□□□□□ -0.39
CLIP4-204ENST00000404424 GLI3P10071 1580 aa12.6□□□□□ -0.39
CLIP4-204ENST00000404424 E7EWF7 191 aa12.6□□□□□ -0.39
CLIP4-204ENST00000404424 RNF113AO15541 343 aaKnown RBP12.6□□□□□ -0.39
CLIP4-204ENST00000404424 CTDNEP1O95476 244 aa12.6□□□□□ -0.39
CLIP4-204ENST00000404424 APOBRQ0VD83 1088 aa12.6□□□□□ -0.39
CLIP4-204ENST00000404424 CCDC191Q8NCU4 936 aa12.6□□□□□ -0.39
CLIP4-204ENST00000404424 CCDC94Q9BW85 323 aaPredicted RBP12.6□□□□□ -0.39
CLIP4-204ENST00000404424 LAMA4Q16363 1823 aa12.6□□□□□ -0.39
CLIP4-204ENST00000404424 GOLGA6L19H0YKK7 550 aa12.6□□□□□ -0.39
CLIP4-204ENST00000404424 EYA2O00167 538 aa12.6□□□□□ -0.39
CLIP4-204ENST00000404424 IFIT1P09914 478 aaKnown RBP12.6□□□□□ -0.39
CLIP4-204ENST00000404424 ATF3P18847 181 aa12.6□□□□□ -0.39
CLIP4-204ENST00000404424 STX1AQ16623 288 aa12.6□□□□□ -0.39
CLIP4-204ENST00000404424 CCDC73Q6ZRK6 1079 aa12.6□□□□□ -0.39
CLIP4-204ENST00000404424 CCAR1Q8IX12 1150 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms