RNA–Protein interactions for RNA: ENST00000401884.5

SNED1-204, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 4,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-204ENST00000401884 KIF1BO60333 1816 aa20.44■□□□□ 0.86
SNED1-204ENST00000401884 SSBP05455 408 aaKnown RBP eCLIP20.44■□□□□ 0.86
SNED1-204ENST00000401884 MARCKSP29966 332 aaPredicted RBP20.44■□□□□ 0.86
SNED1-204ENST00000401884 EIF5P55010 431 aaKnown RBP20.44■□□□□ 0.86
SNED1-204ENST00000401884 SKILP12757 684 aa20.43■□□□□ 0.86
SNED1-204ENST00000401884 GAS2L3Q86XJ1 694 aa20.43■□□□□ 0.86
SNED1-204ENST00000401884 ZNF496Q96IT1 587 aaPredicted RBP20.43■□□□□ 0.86
SNED1-204ENST00000401884 CDC5LQ99459 802 aaKnown RBP20.43■□□□□ 0.86
SNED1-204ENST00000401884 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP20.43■□□□□ 0.86
SNED1-204ENST00000401884 GCKRQ14397 625 aa20.43■□□□□ 0.86
SNED1-204ENST00000401884 LUZP1Q86V48 1076 aa20.43■□□□□ 0.86
SNED1-204ENST00000401884 DZIP1Q86YF9 867 aaKnown RBP20.43■□□□□ 0.86
SNED1-204ENST00000401884 TANGO6Q9C0B7 1094 aa20.43■□□□□ 0.86
SNED1-204ENST00000401884 CPLX3Q8WVH0 158 aa20.43■□□□□ 0.86
SNED1-204ENST00000401884 ZCCHC11Q5TAX3 1644 aaKnown RBP20.42■□□□□ 0.86
SNED1-204ENST00000401884 GIGYF1O75420 1035 aaPredicted RBP20.42■□□□□ 0.86
SNED1-204ENST00000401884 IQSEC3Q9UPP2 1182 aaPredicted RBP20.42■□□□□ 0.86
SNED1-204ENST00000401884 SPTLC2O15270 562 aa20.42■□□□□ 0.86
SNED1-204ENST00000401884 IL2RBP14784 551 aa20.42■□□□□ 0.86
SNED1-204ENST00000401884 NLRP5P59047 1200 aa20.42■□□□□ 0.86
SNED1-204ENST00000401884 NDUFB9Q9Y6M9 179 aa20.42■□□□□ 0.86
SNED1-204ENST00000401884 PRR36Q9H6K5 1346 aa20.42■□□□□ 0.86
SNED1-204ENST00000401884 ATP7BP35670 1465 aa20.42■□□□□ 0.86
SNED1-204ENST00000401884 TET3O43151 1660 aa20.41■□□□□ 0.86
SNED1-204ENST00000401884 ERLIN1O75477 346 aa20.41■□□□□ 0.86
SNED1-204ENST00000401884 WTAPQ15007 396 aa20.41■□□□□ 0.86
SNED1-204ENST00000401884 AOPEPQ8N6M6 819 aa20.41■□□□□ 0.86
SNED1-204ENST00000401884 CLASP1Q7Z460 1538 aa20.41■□□□□ 0.86
SNED1-204ENST00000401884 TMCO3Q6UWJ1 677 aa20.41■□□□□ 0.86
SNED1-204ENST00000401884 CHAMP1Q96JM3 812 aa20.41■□□□□ 0.86
SNED1-204ENST00000401884 EYA2O00167 538 aa20.41■□□□□ 0.86
SNED1-204ENST00000401884 PLBD2Q8NHP8 589 aa20.41■□□□□ 0.86
SNED1-204ENST00000401884 OSBPL3Q9H4L5 887 aa20.41■□□□□ 0.86
SNED1-204ENST00000401884 A0A1B0GUL7 405 aa20.41■□□□□ 0.86
SNED1-204ENST00000401884 ZPR1O75312 459 aa20.41■□□□□ 0.86
SNED1-204ENST00000401884 BMP2KQ9NSY1 1161 aaPredicted RBP20.41■□□□□ 0.86
SNED1-204ENST00000401884 IBTKQ9P2D0 1353 aaPredicted RBP20.41■□□□□ 0.86
SNED1-204ENST00000401884 NOM1Q5C9Z4 860 aaKnown RBP20.4■□□□□ 0.86
SNED1-204ENST00000401884 HELBQ8NG08 1087 aaPredicted RBP20.4■□□□□ 0.86
SNED1-204ENST00000401884 SNW1Q13573 536 aaKnown RBP20.4■□□□□ 0.86
SNED1-204ENST00000401884 PRDM10Q9NQV6 1147 aa20.4■□□□□ 0.86
SNED1-204ENST00000401884 CLTCL1P53675 1640 aa20.4■□□□□ 0.86
SNED1-204ENST00000401884 PTGS1P23219 599 aa20.4■□□□□ 0.86
SNED1-204ENST00000401884 BEND3Q5T5X7 828 aa20.4■□□□□ 0.86
SNED1-204ENST00000401884 CEP135Q66GS9 1140 aa20.4■□□□□ 0.86
SNED1-204ENST00000401884 TM6SF1Q9BZW5 370 aa20.4■□□□□ 0.86
SNED1-204ENST00000401884 SLC52A2Q9HAB3 445 aa20.4■□□□□ 0.86
SNED1-204ENST00000401884 EAF2Q96CJ1 260 aaPredicted RBP20.39■□□□□ 0.86
SNED1-204ENST00000401884 EDC3Q96F86 508 aaKnown RBP20.39■□□□□ 0.86
SNED1-204ENST00000401884 ZNF287Q9HBT7 754 aa20.39■□□□□ 0.85
SNED1-204ENST00000401884 UNC5CLQ8IV45 518 aa20.39■□□□□ 0.85
SNED1-204ENST00000401884 ZNF444Q8N0Y2 327 aaPredicted RBP20.39■□□□□ 0.85
SNED1-204ENST00000401884 FAM89AQ96GI7 184 aa20.39■□□□□ 0.85
SNED1-204ENST00000401884 CCDC194A0A1B0GVG4 234 aa20.39■□□□□ 0.85
SNED1-204ENST00000401884 UBASH3AP57075 661 aa20.39■□□□□ 0.85
SNED1-204ENST00000401884 ANKIB1Q9P2G1 1089 aa20.39■□□□□ 0.85
SNED1-204ENST00000401884 PAXBP1Q9Y5B6 917 aa20.39■□□□□ 0.85
SNED1-204ENST00000401884 MAP3K4Q9Y6R4 1608 aa20.39■□□□□ 0.85
SNED1-204ENST00000401884 UNC13BO14795 1591 aa20.38■□□□□ 0.85
SNED1-204ENST00000401884 EFCAB6Q5THR3 1501 aa20.38■□□□□ 0.85
SNED1-204ENST00000401884 LMOD1P29536 600 aaPredicted RBP20.38■□□□□ 0.85
SNED1-204ENST00000401884 PIP4K2BP78356 416 aa20.38■□□□□ 0.85
SNED1-204ENST00000401884 KIF4BQ2VIQ3 1234 aa20.38■□□□□ 0.85
SNED1-204ENST00000401884 KBTBD3Q8NAB2 608 aa20.38■□□□□ 0.85
SNED1-204ENST00000401884 KRT23Q9C075 422 aa20.38■□□□□ 0.85
SNED1-204ENST00000401884 STAP2Q9UGK3 403 aa20.38■□□□□ 0.85
SNED1-204ENST00000401884 HSP90AA4PQ58FG1 418 aa20.38■□□□□ 0.85
SNED1-204ENST00000401884 HELLSQ9NRZ9 838 aa20.38■□□□□ 0.85
SNED1-204ENST00000401884 CCDC152Q4G0S7 254 aa20.37■□□□□ 0.85
SNED1-204ENST00000401884 LUC7LQ9NQ29 371 aaKnown RBP20.37■□□□□ 0.85
SNED1-204ENST00000401884 IGSF1Q8N6C5 1336 aa20.37■□□□□ 0.85
SNED1-204ENST00000401884 A1BGP04217 495 aa20.37■□□□□ 0.85
SNED1-204ENST00000401884 CYP7A1P22680 504 aa20.37■□□□□ 0.85
SNED1-204ENST00000401884 RTN1Q16799 776 aa20.37■□□□□ 0.85
SNED1-204ENST00000401884 PPP4R3BQ5MIZ7 849 aa20.37■□□□□ 0.85
SNED1-204ENST00000401884 TMTC2Q8N394 836 aa20.37■□□□□ 0.85
SNED1-204ENST00000401884 CCDC150Q8NCX0 1101 aa20.37■□□□□ 0.85
SNED1-204ENST00000401884 SLC4A4Q9Y6R1 1079 aa20.37■□□□□ 0.85
SNED1-204ENST00000401884 PTH1RQ03431 593 aa20.37■□□□□ 0.85
SNED1-204ENST00000401884 AXDND1Q5T1B0 1012 aaPredicted RBP20.37■□□□□ 0.85
SNED1-204ENST00000401884 TSPY2A6NKD2 308 aa20.37■□□□□ 0.85
SNED1-204ENST00000401884 KIF5CO60282 957 aa20.37■□□□□ 0.85
SNED1-204ENST00000401884 CNNM2Q9H8M5 875 aa20.37■□□□□ 0.85
SNED1-204ENST00000401884 LRRIQ1Q96JM4 1722 aa20.37■□□□□ 0.85
SNED1-204ENST00000401884 SHROOM2Q13796 1616 aa20.37■□□□□ 0.85
SNED1-204ENST00000401884 KIAA1328Q86T90 577 aa20.36■□□□□ 0.85
SNED1-204ENST00000401884 KANK3Q6NY19 840 aa20.36■□□□□ 0.85
SNED1-204ENST00000401884 ZNF594Q96JF6 807 aaPredicted RBP20.36■□□□□ 0.85
SNED1-204ENST00000401884 CGNQ9P2M7 1197 aaKnown RBP20.36■□□□□ 0.85
SNED1-204ENST00000401884 ROBO2Q9HCK4 1378 aa20.36■□□□□ 0.85
SNED1-204ENST00000401884 IRS4O14654 1257 aaPredicted RBP20.36■□□□□ 0.85
SNED1-204ENST00000401884 NCOA5Q9HCD5 579 aaKnown RBP20.36■□□□□ 0.85
SNED1-204ENST00000401884 FSD2A1L4K1 749 aa20.35■□□□□ 0.85
SNED1-204ENST00000401884 ESR2Q92731 530 aa20.35■□□□□ 0.85
SNED1-204ENST00000401884 CWC15Q9P013 229 aaKnown RBP20.35■□□□□ 0.85
SNED1-204ENST00000401884 SSH2Q76I76 1423 aa20.35■□□□□ 0.85
SNED1-204ENST00000401884 ME3Q16798 604 aa20.35■□□□□ 0.85
SNED1-204ENST00000401884 CCDC181Q5TID7 509 aa20.35■□□□□ 0.85
SNED1-204ENST00000401884 ZSCAN29Q8IWY8 852 aaPredicted RBP20.35■□□□□ 0.85
SNED1-204ENST00000401884 RXRAP19793 462 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms