RNA–Protein interactions for RNA: ENST00000400227.7

CSNK2A1-204, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CSNK2A1, Length 1,499 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-204ENST00000400227 AVENQ9NQS1 362 aaPredicted RBP9.37□□□□□ -0.91
CSNK2A1-204ENST00000400227 PRR12Q9ULL5 1215 aa9.37□□□□□ -0.91
CSNK2A1-204ENST00000400227 GNEQ9Y223 722 aaKnown RBP9.37□□□□□ -0.91
CSNK2A1-204ENST00000400227 RTCBQ9Y3I0 505 aaKnown RBP9.37□□□□□ -0.91
CSNK2A1-204ENST00000400227 CAMSAP2Q08AD1 1489 aa9.37□□□□□ -0.91
CSNK2A1-204ENST00000400227 POLR1AO95602 1720 aaPredicted RBP9.37□□□□□ -0.91
CSNK2A1-204ENST00000400227 ZNF644Q9H582 1327 aaPredicted RBP9.37□□□□□ -0.91
CSNK2A1-204ENST00000400227 ABCA8O94911 1581 aa9.36□□□□□ -0.91
CSNK2A1-204ENST00000400227 ADGRL2O95490 1459 aa9.36□□□□□ -0.91
CSNK2A1-204ENST00000400227 RPRD2Q5VT52 1461 aaKnown RBP9.36□□□□□ -0.91
CSNK2A1-204ENST00000400227 PLB1Q6P1J6 1458 aa9.36□□□□□ -0.91
CSNK2A1-204ENST00000400227 HSPA5P11021 654 aaKnown RBP9.36□□□□□ -0.91
CSNK2A1-204ENST00000400227 ZNF468Q5VIY5 522 aaPredicted RBP9.36□□□□□ -0.91
CSNK2A1-204ENST00000400227 RGL4Q8IZJ4 473 aa9.36□□□□□ -0.91
CSNK2A1-204ENST00000400227 ANO2Q9NQ90 1003 aa9.36□□□□□ -0.91
CSNK2A1-204ENST00000400227 FAM13BQ9NYF5 915 aa9.36□□□□□ -0.91
CSNK2A1-204ENST00000400227 CDK11AQ9UQ88 783 aaPredicted RBP9.36□□□□□ -0.91
CSNK2A1-204ENST00000400227 CDC42BPAQ5VT25 1732 aa9.36□□□□□ -0.91
CSNK2A1-204ENST00000400227 GPATCH8Q9UKJ3 1502 aaKnown RBP9.36□□□□□ -0.91
CSNK2A1-204ENST00000400227 PZPP20742 1482 aa9.35□□□□□ -0.91
CSNK2A1-204ENST00000400227 TEX14Q8IWB6 1497 aa9.35□□□□□ -0.91
CSNK2A1-204ENST00000400227 ICMTO60725 284 aa9.35□□□□□ -0.91
CSNK2A1-204ENST00000400227 FAM13AO94988 1023 aa9.35□□□□□ -0.91
CSNK2A1-204ENST00000400227 KCNA1Q09470 495 aa9.35□□□□□ -0.91
CSNK2A1-204ENST00000400227 NOM1Q5C9Z4 860 aaKnown RBP9.35□□□□□ -0.91
CSNK2A1-204ENST00000400227 ZSCAN1Q8NBB4 408 aa9.35□□□□□ -0.91
CSNK2A1-204ENST00000400227 USP20Q9Y2K6 914 aa9.35□□□□□ -0.91
CSNK2A1-204ENST00000400227 EIF1AXP47813 144 aaKnown RBP9.34□□□□□ -0.91
CSNK2A1-204ENST00000400227 LYPD4Q6UWN0 246 aa9.34□□□□□ -0.91
CSNK2A1-204ENST00000400227 GOLGA6L1Q8N7Z2 621 aa9.34□□□□□ -0.91
CSNK2A1-204ENST00000400227 WHAMMQ8TF30 809 aa9.34□□□□□ -0.91
CSNK2A1-204ENST00000400227 GSX2Q9BZM3 304 aa9.34□□□□□ -0.91
CSNK2A1-204ENST00000400227 EFCC1Q9HA90 598 aa9.34□□□□□ -0.91
CSNK2A1-204ENST00000400227 GDF2Q9UK05 429 aaPredicted RBP9.34□□□□□ -0.91
CSNK2A1-204ENST00000400227 ADH6P28332 368 aa9.34□□□□□ -0.91
CSNK2A1-204ENST00000400227 CCINQ13939 588 aa9.34□□□□□ -0.91
CSNK2A1-204ENST00000400227 ZNF385CQ66K41 422 aaPredicted RBP9.34□□□□□ -0.91
CSNK2A1-204ENST00000400227 ALKBH2Q6NS38 261 aa9.34□□□□□ -0.91
CSNK2A1-204ENST00000400227 CMTR1Q8N1G2 835 aaKnown RBP9.34□□□□□ -0.91
CSNK2A1-204ENST00000400227 PIK3R5Q8WYR1 880 aa9.34□□□□□ -0.91
CSNK2A1-204ENST00000400227 KLF15Q9UIH9 416 aa9.34□□□□□ -0.91
CSNK2A1-204ENST00000400227 GGA1Q9UJY5 639 aa9.34□□□□□ -0.91
CSNK2A1-204ENST00000400227 CARMIL2Q6F5E8 1435 aa9.34□□□□□ -0.92
CSNK2A1-204ENST00000400227 WASHC2AQ641Q2 1341 aa9.33□□□□□ -0.92
CSNK2A1-204ENST00000400227 NCOA1Q15788 1441 aa9.33□□□□□ -0.92
CSNK2A1-204ENST00000400227 H3BRB1 525 aa9.33□□□□□ -0.92
CSNK2A1-204ENST00000400227 EGFRP00533 1210 aa9.33□□□□□ -0.92
CSNK2A1-204ENST00000400227 CELA2BP08218 269 aaPredicted RBP9.33□□□□□ -0.92
CSNK2A1-204ENST00000400227 RAB44Q7Z6P3 723 aaPredicted RBP9.33□□□□□ -0.92
CSNK2A1-204ENST00000400227 SYT9Q86SS6 491 aa9.33□□□□□ -0.92
CSNK2A1-204ENST00000400227 ATCAYQ86WG3 371 aa9.33□□□□□ -0.92
CSNK2A1-204ENST00000400227 TUT1Q9H6E5 874 aaKnown RBP9.33□□□□□ -0.92
CSNK2A1-204ENST00000400227 LRRC4BQ9NT99 713 aa9.33□□□□□ -0.92
CSNK2A1-204ENST00000400227 KCNMB2Q9Y691 235 aa9.33□□□□□ -0.92
CSNK2A1-204ENST00000400227 ABCC10Q5T3U5 1492 aa9.33□□□□□ -0.92
CSNK2A1-204ENST00000400227 BCRP11274 1271 aa9.32□□□□□ -0.92
CSNK2A1-204ENST00000400227 PCBP4P57723 403 aaKnown RBP9.32□□□□□ -0.92
CSNK2A1-204ENST00000400227 SLCO4C1Q6ZQN7 724 aa9.32□□□□□ -0.92
CSNK2A1-204ENST00000400227 GLYCTKQ8IVS8 523 aa9.32□□□□□ -0.92
CSNK2A1-204ENST00000400227 GPR152Q8TDT2 470 aa9.32□□□□□ -0.92
CSNK2A1-204ENST00000400227 CNTLNQ9NXG0 1405 aa9.31□□□□□ -0.92
CSNK2A1-204ENST00000400227 MBD5Q9P267 1494 aa9.31□□□□□ -0.92
CSNK2A1-204ENST00000400227 NEURL1BA8MQ27 555 aa9.31□□□□□ -0.92
CSNK2A1-204ENST00000400227 SIN3BO75182 1162 aa9.31□□□□□ -0.92
CSNK2A1-204ENST00000400227 XYLBO75191 536 aa9.31□□□□□ -0.92
CSNK2A1-204ENST00000400227 ECM1Q16610 540 aa9.31□□□□□ -0.92
CSNK2A1-204ENST00000400227 NBPF8Q3BBV2 869 aa9.31□□□□□ -0.92
CSNK2A1-204ENST00000400227 SVOPQ8N4V2 548 aa9.31□□□□□ -0.92
CSNK2A1-204ENST00000400227 BHMTQ93088 406 aa9.31□□□□□ -0.92
CSNK2A1-204ENST00000400227 ATP10BO94823 1461 aa9.3□□□□□ -0.92
CSNK2A1-204ENST00000400227 PATL2C9JE40 543 aaKnown RBP9.3□□□□□ -0.92
CSNK2A1-204ENST00000400227 OIP5O43482 229 aa9.3□□□□□ -0.92
CSNK2A1-204ENST00000400227 TRIP4Q15650 581 aaPredicted RBP9.3□□□□□ -0.92
CSNK2A1-204ENST00000400227 C1orf229Q6ZS94 237 aaPredicted RBP9.3□□□□□ -0.92
CSNK2A1-204ENST00000400227 FCHSD1Q86WN1 690 aa9.3□□□□□ -0.92
CSNK2A1-204ENST00000400227 PNMA5Q96PV4 448 aa9.3□□□□□ -0.92
CSNK2A1-204ENST00000400227 CFDP1Q9UEE9 299 aaPredicted RBP9.3□□□□□ -0.92
CSNK2A1-204ENST00000400227 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.3□□□□□ -0.92
CSNK2A1-204ENST00000400227 CCDC7Q96M83 1385 aa9.3□□□□□ -0.92
CSNK2A1-204ENST00000400227 SPATA31E1Q6ZUB1 1445 aa9.3□□□□□ -0.92
CSNK2A1-204ENST00000400227 SHANK2Q9UPX8 1470 aa9.3□□□□□ -0.92
CSNK2A1-204ENST00000400227 SOWAHDA6NJG2 315 aa9.29□□□□□ -0.92
CSNK2A1-204ENST00000400227 EDEM1Q92611 657 aa9.29□□□□□ -0.92
CSNK2A1-204ENST00000400227 IVNS1ABPQ9Y6Y0 642 aa9.29□□□□□ -0.92
CSNK2A1-204ENST00000400227 EPXP11678 715 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 NFKB1P19838 968 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 MZF1P28698 734 aaPredicted RBP9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 MAP3K10Q02779 954 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 DNM1Q05193 864 aaKnown RBP9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 HOMEZQ8IX15 550 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 KCTD17Q8N5Z5 321 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 NUDT16Q96DE0 195 aaKnown RBP9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 MDFIQ99750 246 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 FNDC3AQ9Y2H6 1198 aaKnown RBP9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 KIAA1107Q9UPP5 1409 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 KDM5DQ9BY66 1539 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 LOC100996750A0A140TA64 210 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 UBAP1LF5GYI3 381 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 FZD6O60353 706 aa9.28□□□□□ -0.92
CSNK2A1-204ENST00000400227 SASH3O75995 380 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms