RNA–Protein interactions for RNA: ENST00000396182.6

PDE1C-202, Transcript of phosphodiesterase 1C, humanhuman

TSL 1 (best) BASIC

Gene PDE1C, Length 2,420 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-202ENST00000396182 PGBD1Q96JS3 809 aa18.9■□□□□ 0.62
PDE1C-202ENST00000396182 MYD88Q99836 296 aa18.9■□□□□ 0.62
PDE1C-202ENST00000396182 PHRF1Q9P1Y6 1649 aaKnown RBP18.9■□□□□ 0.62
PDE1C-202ENST00000396182 TSGA10IPQ3SY00 556 aa18.9■□□□□ 0.62
PDE1C-202ENST00000396182 COPS6Q7L5N1 327 aa18.9■□□□□ 0.62
PDE1C-202ENST00000396182 CDK11BP21127 795 aaKnown RBP18.89■□□□□ 0.61
PDE1C-202ENST00000396182 ZNF592Q92610 1267 aa18.89■□□□□ 0.61
PDE1C-202ENST00000396182 DBNLQ9UJU6 430 aaKnown RBP18.89■□□□□ 0.61
PDE1C-202ENST00000396182 JCADQ9P266 1359 aa18.89■□□□□ 0.61
PDE1C-202ENST00000396182 USP27XA6NNY8 438 aa18.89■□□□□ 0.61
PDE1C-202ENST00000396182 JAK2O60674 1132 aa18.89■□□□□ 0.61
PDE1C-202ENST00000396182 NEXNQ0ZGT2 675 aa18.89■□□□□ 0.61
PDE1C-202ENST00000396182 BICD2Q8TD16 824 aa18.89■□□□□ 0.61
PDE1C-202ENST00000396182 PIP4K2AP48426 406 aaPredicted RBP18.88■□□□□ 0.61
PDE1C-202ENST00000396182 ANKLE2Q86XL3 938 aa18.88■□□□□ 0.61
PDE1C-202ENST00000396182 LRRC8AQ8IWT6 810 aa18.88■□□□□ 0.61
PDE1C-202ENST00000396182 HMG20BQ9P0W2 317 aa18.88■□□□□ 0.61
PDE1C-202ENST00000396182 ZBTB22O15209 634 aa18.88■□□□□ 0.61
PDE1C-202ENST00000396182 USPL1Q5W0Q7 1092 aa18.88■□□□□ 0.61
PDE1C-202ENST00000396182 SARM1Q6SZW1 724 aa18.88■□□□□ 0.61
PDE1C-202ENST00000396182 ZNF397Q8NF99 534 aaPredicted RBP18.88■□□□□ 0.61
PDE1C-202ENST00000396182 CAVIN2O95810 425 aa18.87■□□□□ 0.61
PDE1C-202ENST00000396182 RBM6P78332 1123 aaKnown RBP18.87■□□□□ 0.61
PDE1C-202ENST00000396182 TFCP2Q12800 502 aa18.87■□□□□ 0.61
PDE1C-202ENST00000396182 ARID5BQ14865 1188 aa18.87■□□□□ 0.61
PDE1C-202ENST00000396182 IQCB1Q15051 598 aa18.87■□□□□ 0.61
PDE1C-202ENST00000396182 KMT5BQ4FZB7 885 aa18.87■□□□□ 0.61
PDE1C-202ENST00000396182 CCDC129Q6ZRS4 1044 aa18.87■□□□□ 0.61
PDE1C-202ENST00000396182 NYAP1Q6ZVC0 841 aa18.87■□□□□ 0.61
PDE1C-202ENST00000396182 NFATC2IPQ8NCF5 419 aa18.87■□□□□ 0.61
PDE1C-202ENST00000396182 SEC62Q99442 399 aaKnown RBP18.87■□□□□ 0.61
PDE1C-202ENST00000396182 METTL22Q9BUU2 404 aaPredicted RBP18.87■□□□□ 0.61
PDE1C-202ENST00000396182 ZNF215Q9UL58 517 aaPredicted RBP18.87■□□□□ 0.61
PDE1C-202ENST00000396182 SIPA1L3O60292 1781 aaPredicted RBP18.86■□□□□ 0.61
PDE1C-202ENST00000396182 ATP5JP18859 108 aa18.86■□□□□ 0.61
PDE1C-202ENST00000396182 BRD2P25440 801 aaKnown RBP18.86■□□□□ 0.61
PDE1C-202ENST00000396182 RFX5P48382 616 aaPredicted RBP18.86■□□□□ 0.61
PDE1C-202ENST00000396182 PTPN12Q05209 780 aaKnown RBP18.86■□□□□ 0.61
PDE1C-202ENST00000396182 KRT222Q8N1A0 295 aa18.86■□□□□ 0.61
PDE1C-202ENST00000396182 DDX11Q96FC9 970 aa18.86■□□□□ 0.61
PDE1C-202ENST00000396182 MRFAP1L1Q96HT8 127 aa18.86■□□□□ 0.61
PDE1C-202ENST00000396182 NEK1Q96PY6 1258 aa18.86■□□□□ 0.61
PDE1C-202ENST00000396182 COPRSQ9NQ92 184 aa18.86■□□□□ 0.61
PDE1C-202ENST00000396182 NEMFO60524 1076 aa18.85■□□□□ 0.61
PDE1C-202ENST00000396182 TNNI3KQ59H18 835 aa18.85■□□□□ 0.61
PDE1C-202ENST00000396182 BCL11BQ9C0K0 894 aaPredicted RBP18.85■□□□□ 0.61
PDE1C-202ENST00000396182 FPGT-TNNI3KV9GXZ4 949 aa18.85■□□□□ 0.61
PDE1C-202ENST00000396182 TERF2Q15554 542 aa18.85■□□□□ 0.61
PDE1C-202ENST00000396182 C11orf57Q6ZUT1 292 aaPredicted RBP18.85■□□□□ 0.61
PDE1C-202ENST00000396182 GTF3C6Q969F1 213 aa18.85■□□□□ 0.61
PDE1C-202ENST00000396182 SLC52A2Q9HAB3 445 aa18.85■□□□□ 0.61
PDE1C-202ENST00000396182 USP16Q9Y5T5 823 aa18.85■□□□□ 0.61
PDE1C-202ENST00000396182 RESTQ13127 1097 aa18.84■□□□□ 0.61
PDE1C-202ENST00000396182 ANKRD13DQ6ZTN6 518 aa18.84■□□□□ 0.61
PDE1C-202ENST00000396182 Q6ZUG5 572 aa18.84■□□□□ 0.61
PDE1C-202ENST00000396182 ZNF496Q96IT1 587 aaPredicted RBP18.84■□□□□ 0.61
PDE1C-202ENST00000396182 GOLGA6L19H0YKK7 550 aa18.84■□□□□ 0.61
PDE1C-202ENST00000396182 ZC3H6P61129 1189 aaKnown RBP18.84■□□□□ 0.61
PDE1C-202ENST00000396182 PTPN14Q15678 1187 aa18.84■□□□□ 0.61
PDE1C-202ENST00000396182 BRF1Q92994 677 aa18.84■□□□□ 0.61
PDE1C-202ENST00000396182 DNAJC2Q99543 621 aaKnown RBP18.84■□□□□ 0.61
PDE1C-202ENST00000396182 FAM53CQ9NYF3 392 aa18.84■□□□□ 0.61
PDE1C-202ENST00000396182 MRC1P22897 1456 aa18.84■□□□□ 0.61
PDE1C-202ENST00000396182 SLIT3O75094 1523 aa18.84■□□□□ 0.61
PDE1C-202ENST00000396182 ERBB3P21860 1342 aa18.84■□□□□ 0.61
PDE1C-202ENST00000396182 CYP21A2P08686 494 aa18.83■□□□□ 0.61
PDE1C-202ENST00000396182 SKILP12757 684 aa18.83■□□□□ 0.61
PDE1C-202ENST00000396182 KRT32Q14532 448 aa18.83■□□□□ 0.61
PDE1C-202ENST00000396182 TAF7LQ5H9L4 462 aa18.83■□□□□ 0.61
PDE1C-202ENST00000396182 LRP10Q7Z4F1 713 aa18.83■□□□□ 0.61
PDE1C-202ENST00000396182 DBNDD2Q9BQY9 259 aa18.83■□□□□ 0.61
PDE1C-202ENST00000396182 LRRC2Q9BYS8 371 aa18.83■□□□□ 0.61
PDE1C-202ENST00000396182 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.83■□□□□ 0.61
PDE1C-202ENST00000396182 V9GYY5 206 aaPredicted RBP18.83■□□□□ 0.61
PDE1C-202ENST00000396182 FBXO38Q6PIJ6 1188 aa18.83■□□□□ 0.6
PDE1C-202ENST00000396182 ZNF609O15014 1411 aa18.83■□□□□ 0.6
PDE1C-202ENST00000396182 CCZ1BP86790 482 aa18.82■□□□□ 0.6
PDE1C-202ENST00000396182 CCZ1P86791 482 aaPredicted RBP18.82■□□□□ 0.6
PDE1C-202ENST00000396182 UBE3BQ7Z3V4 1068 aa18.82■□□□□ 0.6
PDE1C-202ENST00000396182 ERO1AQ96HE7 468 aa18.82■□□□□ 0.6
PDE1C-202ENST00000396182 KDM6AO15550 1401 aaPredicted RBP18.82■□□□□ 0.6
PDE1C-202ENST00000396182 ATP5J2-PTCD1G3V325 749 aa18.82■□□□□ 0.6
PDE1C-202ENST00000396182 PTCD1O75127 700 aaKnown RBP18.82■□□□□ 0.6
PDE1C-202ENST00000396182 DDX46Q7L014 1031 aaKnown RBP18.82■□□□□ 0.6
PDE1C-202ENST00000396182 CCDC69A6NI79 296 aa18.81■□□□□ 0.6
PDE1C-202ENST00000396182 HSP90B1P14625 803 aaKnown RBP18.81■□□□□ 0.6
PDE1C-202ENST00000396182 ELF2Q15723 593 aa18.81■□□□□ 0.6
PDE1C-202ENST00000396182 STX1AQ16623 288 aa18.81■□□□□ 0.6
PDE1C-202ENST00000396182 CCDC9Q9Y3X0 531 aaKnown RBP18.81■□□□□ 0.6
PDE1C-202ENST00000396182 C5P01031 1676 aa18.81■□□□□ 0.6
PDE1C-202ENST00000396182 SCRN1Q12765 414 aa18.81■□□□□ 0.6
PDE1C-202ENST00000396182 SLFNL1Q499Z3 407 aa18.81■□□□□ 0.6
PDE1C-202ENST00000396182 KRT28Q7Z3Y7 464 aa18.81■□□□□ 0.6
PDE1C-202ENST00000396182 RAPGEF4Q8WZA2 1011 aa18.81■□□□□ 0.6
PDE1C-202ENST00000396182 ADAMTS7Q9UKP4 1686 aa18.8■□□□□ 0.6
PDE1C-202ENST00000396182 PHKG2P15735 406 aa18.8■□□□□ 0.6
PDE1C-202ENST00000396182 MCMDC2Q4G0Z9 681 aa18.8■□□□□ 0.6
PDE1C-202ENST00000396182 STOX1Q6ZVD7 989 aa18.8■□□□□ 0.6
PDE1C-202ENST00000396182 CCAR2Q8N163 923 aaKnown RBP18.8■□□□□ 0.6
PDE1C-202ENST00000396182 NLRP2Q9NX02 1062 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms