RNA–Protein interactions for RNA: ENST00000396082.2

UPK3A-202, Transcript of uroplakin 3A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene UPK3A, Length 627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-202ENST00000396082 XDHP47989 1333 aa22.14■■□□□ 1.14
UPK3A-202ENST00000396082 ITGA6P23229 1130 aa22.14■■□□□ 1.13
UPK3A-202ENST00000396082 CXCL9Q07325 125 aa22.14■■□□□ 1.13
UPK3A-202ENST00000396082 CIAPIN1Q6FI81 312 aa22.14■■□□□ 1.13
UPK3A-202ENST00000396082 GPR101Q96P66 508 aaPredicted RBP22.14■■□□□ 1.13
UPK3A-202ENST00000396082 PODXL2Q9NZ53 605 aa22.14■■□□□ 1.13
UPK3A-202ENST00000396082 G3V3G9 751 aa22.13■■□□□ 1.13
UPK3A-202ENST00000396082 DCAF8Q5TAQ9 597 aa22.13■■□□□ 1.13
UPK3A-202ENST00000396082 CHADLQ6NUI6 762 aa22.13■■□□□ 1.13
UPK3A-202ENST00000396082 MPHOSPH8Q99549 860 aa22.13■■□□□ 1.13
UPK3A-202ENST00000396082 ZC3H12CQ9C0D7 883 aaKnown RBP22.13■■□□□ 1.13
UPK3A-202ENST00000396082 DBNDD1Q9H9R9 158 aa22.13■■□□□ 1.13
UPK3A-202ENST00000396082 BSDC1Q9NW68 430 aaPredicted RBP22.13■■□□□ 1.13
UPK3A-202ENST00000396082 ANKRD18BA2A2Z9 1011 aa22.12■■□□□ 1.13
UPK3A-202ENST00000396082 RAD17O75943 681 aa22.12■■□□□ 1.13
UPK3A-202ENST00000396082 POTEIP0CG38 1075 aa22.12■■□□□ 1.13
UPK3A-202ENST00000396082 POTEJP0CG39 1038 aa22.12■■□□□ 1.13
UPK3A-202ENST00000396082 TNIP1Q15025 636 aa22.12■■□□□ 1.13
UPK3A-202ENST00000396082 PNMA8AQ86V59 439 aaPredicted RBP22.12■■□□□ 1.13
UPK3A-202ENST00000396082 LDHDQ86WU2 507 aa22.12■■□□□ 1.13
UPK3A-202ENST00000396082 CLEC11AQ9Y240 323 aa22.12■■□□□ 1.13
UPK3A-202ENST00000396082 CSF1RP07333 972 aa22.11■■□□□ 1.13
UPK3A-202ENST00000396082 SCNN1DP51172 638 aa22.11■■□□□ 1.13
UPK3A-202ENST00000396082 YDJCA8MPS7 323 aa22.1■■□□□ 1.13
UPK3A-202ENST00000396082 ECE2O60344 883 aa22.1■■□□□ 1.13
UPK3A-202ENST00000396082 ATP2B4P23634 1241 aa22.1■■□□□ 1.13
UPK3A-202ENST00000396082 IFIT5Q13325 482 aaKnown RBP22.1■■□□□ 1.13
UPK3A-202ENST00000396082 DOK7Q18PE1 504 aa22.1■■□□□ 1.13
UPK3A-202ENST00000396082 FOXO4P98177 505 aa22.09■■□□□ 1.13
UPK3A-202ENST00000396082 LMBR1LQ6UX01 489 aa22.09■■□□□ 1.13
UPK3A-202ENST00000396082 MINPP1Q9UNW1 487 aa22.09■■□□□ 1.13
UPK3A-202ENST00000396082 EPS15P42566 896 aa22.08■■□□□ 1.13
UPK3A-202ENST00000396082 GMPSP49915 693 aaPredicted RBP22.08■■□□□ 1.13
UPK3A-202ENST00000396082 TAF7LQ5H9L4 462 aa22.08■■□□□ 1.13
UPK3A-202ENST00000396082 CCDC57Q2TAC2 916 aa22.07■■□□□ 1.12
UPK3A-202ENST00000396082 GPRC5DQ9NZD1 345 aa22.07■■□□□ 1.12
UPK3A-202ENST00000396082 NBPF7P0C2Y1 421 aaPredicted RBP22.06■■□□□ 1.12
UPK3A-202ENST00000396082 CCT4P50991 539 aaKnown RBP22.06■■□□□ 1.12
UPK3A-202ENST00000396082 EPHA10Q5JZY3 1008 aa22.06■■□□□ 1.12
UPK3A-202ENST00000396082 ANKRD2Q9GZV1 360 aa22.06■■□□□ 1.12
UPK3A-202ENST00000396082 ADAMTSL1Q8N6G6 1762 aa22.05■■□□□ 1.12
UPK3A-202ENST00000396082 PSMD14O00487 310 aa22.05■■□□□ 1.12
UPK3A-202ENST00000396082 KCNJ4P48050 445 aa22.05■■□□□ 1.12
UPK3A-202ENST00000396082 SUCLG2Q96I99 432 aa22.05■■□□□ 1.12
UPK3A-202ENST00000396082 NOB1Q9ULX3 412 aaKnown RBP22.05■■□□□ 1.12
UPK3A-202ENST00000396082 MED23Q9ULK4 1368 aa22.04■■□□□ 1.12
UPK3A-202ENST00000396082 RARSP54136 660 aaKnown RBP22.04■■□□□ 1.12
UPK3A-202ENST00000396082 HTRA3P83110 453 aa22.04■■□□□ 1.12
UPK3A-202ENST00000396082 USP50Q70EL3 339 aaPredicted RBP22.04■■□□□ 1.12
UPK3A-202ENST00000396082 API5Q9BZZ5 524 aaKnown RBP22.04■■□□□ 1.12
UPK3A-202ENST00000396082 ADARB2Q9NS39 739 aaKnown RBP22.04■■□□□ 1.12
UPK3A-202ENST00000396082 UTYO14607 1347 aa22.04■■□□□ 1.12
UPK3A-202ENST00000396082 KIF16BQ96L93 1317 aa22.04■■□□□ 1.12
UPK3A-202ENST00000396082 CHRNDQ07001 517 aa22.03■■□□□ 1.12
UPK3A-202ENST00000396082 LEMD3Q9Y2U8 911 aa22.03■■□□□ 1.12
UPK3A-202ENST00000396082 ZBTB12Q9Y330 459 aaPredicted RBP22.03■■□□□ 1.12
UPK3A-202ENST00000396082 SCN9AQ15858 1988 aa22.02■■□□□ 1.12
UPK3A-202ENST00000396082 MAP1SQ66K74 1059 aaPredicted RBP22.02■■□□□ 1.12
UPK3A-202ENST00000396082 CNNM1Q9NRU3 951 aa22.02■■□□□ 1.12
UPK3A-202ENST00000396082 ZNF804BA4D1E1 1349 aa22.02■■□□□ 1.12
UPK3A-202ENST00000396082 H7C1D1 291 aa22.01■■□□□ 1.11
UPK3A-202ENST00000396082 BRPF1P55201 1214 aaPredicted RBP22.01■■□□□ 1.11
UPK3A-202ENST00000396082 LDHAL6AQ6ZMR3 332 aa22.01■■□□□ 1.11
UPK3A-202ENST00000396082 ZNF594Q96JF6 807 aaPredicted RBP22.01■■□□□ 1.11
UPK3A-202ENST00000396082 BICC1Q9H694 974 aaKnown RBP22.01■■□□□ 1.11
UPK3A-202ENST00000396082 KCNQ5Q9NR82 932 aa22.01■■□□□ 1.11
UPK3A-202ENST00000396082 CNOT7Q9UIV1 285 aaKnown RBP22.01■■□□□ 1.11
UPK3A-202ENST00000396082 WTIPA6NIX2 430 aaPredicted RBP22■■□□□ 1.11
UPK3A-202ENST00000396082 RPS12P25398 132 aaKnown RBP22■■□□□ 1.11
UPK3A-202ENST00000396082 MICALL2Q8IY33 904 aa22■■□□□ 1.11
UPK3A-202ENST00000396082 CNTROBQ8N137 903 aa22■■□□□ 1.11
UPK3A-202ENST00000396082 KAZALD1Q96I82 304 aa22■■□□□ 1.11
UPK3A-202ENST00000396082 A0A1B0GUL6 1792 aa21.99■■□□□ 1.11
UPK3A-202ENST00000396082 PODNQ7Z5L7 613 aa21.99■■□□□ 1.11
UPK3A-202ENST00000396082 DPF2Q92785 391 aa21.99■■□□□ 1.11
UPK3A-202ENST00000396082 USP44Q9H0E7 712 aa21.99■■□□□ 1.11
UPK3A-202ENST00000396082 ZBED9Q6R2W3 1325 aa21.99■■□□□ 1.11
UPK3A-202ENST00000396082 PSME4Q14997 1843 aa21.99■■□□□ 1.11
UPK3A-202ENST00000396082 TAF5LO75529 589 aa21.98■■□□□ 1.11
UPK3A-202ENST00000396082 HELBQ8NG08 1087 aaPredicted RBP21.98■■□□□ 1.11
UPK3A-202ENST00000396082 FBXW7Q969H0 707 aa21.98■■□□□ 1.11
UPK3A-202ENST00000396082 SHTN1A0MZ66 631 aa21.97■■□□□ 1.11
UPK3A-202ENST00000396082 PLIN1O60240 522 aa21.97■■□□□ 1.11
UPK3A-202ENST00000396082 COA1Q9GZY4 146 aa21.97■■□□□ 1.11
UPK3A-202ENST00000396082 PASKQ96RG2 1323 aa21.97■■□□□ 1.11
UPK3A-202ENST00000396082 USP17L3A6NCW0 530 aa21.96■■□□□ 1.11
UPK3A-202ENST00000396082 USP17L4A6NCW7 530 aa21.96■■□□□ 1.11
UPK3A-202ENST00000396082 IPO8O15397 1037 aaKnown RBP21.96■■□□□ 1.11
UPK3A-202ENST00000396082 ITGBL1O95965 494 aaPredicted RBP21.96■■□□□ 1.11
UPK3A-202ENST00000396082 VIL1P09327 827 aaKnown RBP21.96■■□□□ 1.11
UPK3A-202ENST00000396082 UBTFL1P0CB47 393 aaPredicted RBP21.96■■□□□ 1.11
UPK3A-202ENST00000396082 RABL6Q3YEC7 729 aaPredicted RBP21.96■■□□□ 1.11
UPK3A-202ENST00000396082 USP17L1Q7RTZ2 530 aa21.96■■□□□ 1.11
UPK3A-202ENST00000396082 ARHGAP45Q92619 1136 aa21.96■■□□□ 1.11
UPK3A-202ENST00000396082 FRAT1Q92837 279 aaPredicted RBP21.96■■□□□ 1.11
UPK3A-202ENST00000396082 KLRK1P26718 216 aa21.95■■□□□ 1.1
UPK3A-202ENST00000396082 RSBN1LQ6PCB5 846 aaPredicted RBP21.95■■□□□ 1.1
UPK3A-202ENST00000396082 TXNRD3Q86VQ6 643 aa21.95■■□□□ 1.1
UPK3A-202ENST00000396082 DNAJC5GQ8N7S2 189 aa21.95■■□□□ 1.1
UPK3A-202ENST00000396082 ANKRD44Q8N8A2 993 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms