RNA–Protein interactions for RNA: ENST00000396081.5

HERPUD2-202, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 3,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-202ENST00000396081 GIGYF1O75420 1035 aaPredicted RBP21.24■□□□□ 0.99
HERPUD2-202ENST00000396081 CLCN6P51797 869 aa21.24■□□□□ 0.99
HERPUD2-202ENST00000396081 KRT32Q14532 448 aa21.24■□□□□ 0.99
HERPUD2-202ENST00000396081 PPP1R13BQ96KQ4 1090 aa21.24■□□□□ 0.99
HERPUD2-202ENST00000396081 TAOK2Q9UL54 1235 aa21.24■□□□□ 0.99
HERPUD2-202ENST00000396081 SEC62Q99442 399 aaKnown RBP21.24■□□□□ 0.99
HERPUD2-202ENST00000396081 DNAJC2Q99543 621 aaKnown RBP21.24■□□□□ 0.99
HERPUD2-202ENST00000396081 BABAM1Q9NWV8 329 aa21.24■□□□□ 0.99
HERPUD2-202ENST00000396081 A0A1B0GVL5 298 aa21.23■□□□□ 0.99
HERPUD2-202ENST00000396081 FAM160A1Q05DH4 1040 aa21.23■□□□□ 0.99
HERPUD2-202ENST00000396081 SLFNL1Q499Z3 407 aa21.23■□□□□ 0.99
HERPUD2-202ENST00000396081 XPO4Q9C0E2 1151 aaKnown RBP21.23■□□□□ 0.99
HERPUD2-202ENST00000396081 NRDCO43847 1150 aa21.23■□□□□ 0.99
HERPUD2-202ENST00000396081 MPRIPQ6WCQ1 1025 aa21.23■□□□□ 0.99
HERPUD2-202ENST00000396081 RCOR1Q9UKL0 485 aa21.23■□□□□ 0.99
HERPUD2-202ENST00000396081 SF3A1Q15459 793 aaKnown RBP21.23■□□□□ 0.99
HERPUD2-202ENST00000396081 NCOA5Q9HCD5 579 aaKnown RBP21.23■□□□□ 0.99
HERPUD2-202ENST00000396081 DBF4Q9UBU7 674 aaPredicted RBP21.23■□□□□ 0.99
HERPUD2-202ENST00000396081 DNAI1Q9UI46 699 aa21.23■□□□□ 0.99
HERPUD2-202ENST00000396081 ISM2Q6H9L7 571 aa21.22■□□□□ 0.99
HERPUD2-202ENST00000396081 CACNA1FO60840 1977 aa21.22■□□□□ 0.99
HERPUD2-202ENST00000396081 PTPDC1A2A3K4 754 aa21.22■□□□□ 0.99
HERPUD2-202ENST00000396081 SETD1AO15047 1707 aaKnown RBP21.22■□□□□ 0.99
HERPUD2-202ENST00000396081 ADD1P35611 737 aaKnown RBP21.22■□□□□ 0.99
HERPUD2-202ENST00000396081 APOBRQ0VD83 1088 aa21.22■□□□□ 0.99
HERPUD2-202ENST00000396081 NBPF11Q86T75 865 aa21.22■□□□□ 0.99
HERPUD2-202ENST00000396081 UBXN4Q92575 508 aa21.22■□□□□ 0.99
HERPUD2-202ENST00000396081 ZNF396Q96N95 335 aaPredicted RBP21.22■□□□□ 0.99
HERPUD2-202ENST00000396081 ADGRL3Q9HAR2 1447 aa21.22■□□□□ 0.99
HERPUD2-202ENST00000396081 MNS1Q8NEH6 495 aa21.21■□□□□ 0.99
HERPUD2-202ENST00000396081 HDAC5Q9UQL6 1122 aa21.21■□□□□ 0.99
HERPUD2-202ENST00000396081 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP21.21■□□□□ 0.99
HERPUD2-202ENST00000396081 GRM8O00222 908 aa21.2■□□□□ 0.99
HERPUD2-202ENST00000396081 DPCR1Q3MIW9 517 aa21.2■□□□□ 0.99
HERPUD2-202ENST00000396081 FAM177A1Q8N128 213 aaPredicted RBP21.2■□□□□ 0.99
HERPUD2-202ENST00000396081 ALDH8A1Q9H2A2 487 aaPredicted RBP21.2■□□□□ 0.99
HERPUD2-202ENST00000396081 CYP21A2P08686 494 aa21.2■□□□□ 0.98
HERPUD2-202ENST00000396081 PNMA6AP0CW24 399 aaPredicted RBP21.2■□□□□ 0.98
HERPUD2-202ENST00000396081 ARMCX5Q6P1M9 558 aa21.2■□□□□ 0.98
HERPUD2-202ENST00000396081 KSR2Q6VAB6 950 aa21.2■□□□□ 0.98
HERPUD2-202ENST00000396081 ABTB2Q8N961 1025 aa21.2■□□□□ 0.98
HERPUD2-202ENST00000396081 FAM53CQ9NYF3 392 aa21.2■□□□□ 0.98
HERPUD2-202ENST00000396081 MED23Q9ULK4 1368 aa21.2■□□□□ 0.98
HERPUD2-202ENST00000396081 ALDH1L1O75891 902 aa21.2■□□□□ 0.98
HERPUD2-202ENST00000396081 H2AFXP16104 143 aaPredicted RBP21.2■□□□□ 0.98
HERPUD2-202ENST00000396081 TMCO3Q6UWJ1 677 aa21.2■□□□□ 0.98
HERPUD2-202ENST00000396081 FHOD1Q9Y613 1164 aa21.2■□□□□ 0.98
HERPUD2-202ENST00000396081 PRAMEF22A3QJZ6 481 aa21.19■□□□□ 0.98
HERPUD2-202ENST00000396081 URI1O94763 535 aaPredicted RBP21.19■□□□□ 0.98
HERPUD2-202ENST00000396081 HNRNPH2P55795 449 aaKnown RBP21.19■□□□□ 0.98
HERPUD2-202ENST00000396081 NSUN7Q8NE18 718 aaKnown RBP21.19■□□□□ 0.98
HERPUD2-202ENST00000396081 CHMP4AQ9BY43 222 aa21.19■□□□□ 0.98
HERPUD2-202ENST00000396081 RICTORQ6R327 1708 aa21.19■□□□□ 0.98
HERPUD2-202ENST00000396081 LMOD1P29536 600 aaPredicted RBP21.18■□□□□ 0.98
HERPUD2-202ENST00000396081 CHST3Q7LGC8 479 aa21.18■□□□□ 0.98
HERPUD2-202ENST00000396081 ENGASEQ8NFI3 743 aa21.18■□□□□ 0.98
HERPUD2-202ENST00000396081 ARGLU1Q9NWB6 273 aaPredicted RBP21.18■□□□□ 0.98
HERPUD2-202ENST00000396081 CCDC150Q8NCX0 1101 aa21.18■□□□□ 0.98
HERPUD2-202ENST00000396081 MRPS27Q92552 414 aaKnown RBP21.18■□□□□ 0.98
HERPUD2-202ENST00000396081 OSBPL5Q9H0X9 879 aaPredicted RBP21.18■□□□□ 0.98
HERPUD2-202ENST00000396081 L2HGDHQ9H9P8 463 aa21.18■□□□□ 0.98
HERPUD2-202ENST00000396081 NRXN3Q9Y4C0 1643 aa21.18■□□□□ 0.98
HERPUD2-202ENST00000396081 OTUD7BQ6GQQ9 843 aa21.18■□□□□ 0.98
HERPUD2-202ENST00000396081 PCDHA7Q9UN72 937 aa21.18■□□□□ 0.98
HERPUD2-202ENST00000396081 TECPR2O15040 1411 aa21.17■□□□□ 0.98
HERPUD2-202ENST00000396081 SEC31AO94979 1220 aaKnown RBP21.17■□□□□ 0.98
HERPUD2-202ENST00000396081 ZNF530Q6P9A1 599 aaPredicted RBP21.17■□□□□ 0.98
HERPUD2-202ENST00000396081 DDX46Q7L014 1031 aaKnown RBP21.17■□□□□ 0.98
HERPUD2-202ENST00000396081 NEK11Q8NG66 645 aa21.17■□□□□ 0.98
HERPUD2-202ENST00000396081 KAZALD1Q96I82 304 aa21.17■□□□□ 0.98
HERPUD2-202ENST00000396081 STK38Q15208 465 aa21.17■□□□□ 0.98
HERPUD2-202ENST00000396081 TSGA10IPQ3SY00 556 aa21.17■□□□□ 0.98
HERPUD2-202ENST00000396081 U3KPZ7 1027 aaPredicted RBP21.17■□□□□ 0.98
HERPUD2-202ENST00000396081 POLR3DP05423 398 aaPredicted RBP21.16■□□□□ 0.98
HERPUD2-202ENST00000396081 CYP2C19P33261 490 aa21.16■□□□□ 0.98
HERPUD2-202ENST00000396081 PLA2G4AP47712 749 aa21.16■□□□□ 0.98
HERPUD2-202ENST00000396081 NDUFA8P51970 172 aa21.16■□□□□ 0.98
HERPUD2-202ENST00000396081 TPM4P67936 248 aa21.16■□□□□ 0.98
HERPUD2-202ENST00000396081 PTPN21Q16825 1174 aa21.16■□□□□ 0.98
HERPUD2-202ENST00000396081 NAA16Q6N069 864 aaPredicted RBP21.16■□□□□ 0.98
HERPUD2-202ENST00000396081 TMX1Q9H3N1 280 aa21.16■□□□□ 0.98
HERPUD2-202ENST00000396081 IMPACTQ9P2X3 320 aa21.16■□□□□ 0.98
HERPUD2-202ENST00000396081 TEX35Q5T0J7 233 aa21.16■□□□□ 0.98
HERPUD2-202ENST00000396081 PLPPR3Q6T4P5 718 aa21.16■□□□□ 0.98
HERPUD2-202ENST00000396081 EPC1Q9H2F5 836 aa21.16■□□□□ 0.98
HERPUD2-202ENST00000396081 SNRKQ9NRH2 765 aa21.16■□□□□ 0.98
HERPUD2-202ENST00000396081 GNL2Q13823 731 aaKnown RBP21.15■□□□□ 0.98
HERPUD2-202ENST00000396081 CTDNEP1O95476 244 aa21.15■□□□□ 0.98
HERPUD2-202ENST00000396081 HOXB7P09629 217 aa21.15■□□□□ 0.98
HERPUD2-202ENST00000396081 SMARCC2Q8TAQ2 1214 aa21.15■□□□□ 0.98
HERPUD2-202ENST00000396081 PFKFB2O60825 505 aa21.15■□□□□ 0.98
HERPUD2-202ENST00000396081 COL15A1P39059 1388 aa21.15■□□□□ 0.98
HERPUD2-202ENST00000396081 STOX1Q6ZVD7 989 aa21.15■□□□□ 0.98
HERPUD2-202ENST00000396081 OSCARQ8IYS5 282 aa21.15■□□□□ 0.98
HERPUD2-202ENST00000396081 CARD6Q9BX69 1037 aa21.15■□□□□ 0.98
HERPUD2-202ENST00000396081 RIC3Q7Z5B4 369 aa21.14■□□□□ 0.98
HERPUD2-202ENST00000396081 LINS1Q8NG48 757 aa21.14■□□□□ 0.98
HERPUD2-202ENST00000396081 KIAA1468Q9P260 1216 aa21.14■□□□□ 0.98
HERPUD2-202ENST00000396081 PSDA5PKW4 1024 aaPredicted RBP21.14■□□□□ 0.97
HERPUD2-202ENST00000396081 ETF1P62495 437 aaKnown RBP21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms