RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 MLLT1Q03111 559 aaPredicted RBP20.03■□□□□ 0.8
CHMP3-202ENST00000393773 KRT26Q7Z3Y9 468 aa20.03■□□□□ 0.8
CHMP3-202ENST00000393773 TBC1D16Q8TBP0 767 aa20.03■□□□□ 0.8
CHMP3-202ENST00000393773 KCNQ5Q9NR82 932 aa20.03■□□□□ 0.8
CHMP3-202ENST00000393773 C6orf229H3BNL8 230 aa20.02■□□□□ 0.8
CHMP3-202ENST00000393773 IRS4O14654 1257 aaPredicted RBP20.02■□□□□ 0.8
CHMP3-202ENST00000393773 TRIM28Q13263 835 aaKnown RBP20.02■□□□□ 0.8
CHMP3-202ENST00000393773 RTL5Q5HYW3 569 aaPredicted RBP20.02■□□□□ 0.8
CHMP3-202ENST00000393773 HYPKQ9NX55 129 aa20.02■□□□□ 0.8
CHMP3-202ENST00000393773 DOK7Q18PE1 504 aa20.01■□□□□ 0.79
CHMP3-202ENST00000393773 EYA3Q99504 573 aa20.01■□□□□ 0.79
CHMP3-202ENST00000393773 GBA2Q9HCG7 927 aaPredicted RBP20.01■□□□□ 0.79
CHMP3-202ENST00000393773 PODXL2Q9NZ53 605 aa20.01■□□□□ 0.79
CHMP3-202ENST00000393773 KIF4BQ2VIQ3 1234 aa20■□□□□ 0.79
CHMP3-202ENST00000393773 DUSP27Q5VZP5 1158 aa20■□□□□ 0.79
CHMP3-202ENST00000393773 RGMBQ6NW40 437 aa20■□□□□ 0.79
CHMP3-202ENST00000393773 CFAP44Q96MT7 982 aa20■□□□□ 0.79
CHMP3-202ENST00000393773 MBIPQ9NS73 344 aa20■□□□□ 0.79
CHMP3-202ENST00000393773 PDE4DIPQ5VU43 2346 aa19.99■□□□□ 0.79
CHMP3-202ENST00000393773 RPS8P62241 208 aaKnown RBP19.99■□□□□ 0.79
CHMP3-202ENST00000393773 DGKZQ13574 1117 aa19.99■□□□□ 0.79
CHMP3-202ENST00000393773 GGA3Q9NZ52 723 aa19.99■□□□□ 0.79
CHMP3-202ENST00000393773 ASTN2O75129 1339 aaPredicted RBP19.99■□□□□ 0.79
CHMP3-202ENST00000393773 VIL1P09327 827 aaKnown RBP19.98■□□□□ 0.79
CHMP3-202ENST00000393773 WDR43Q15061 677 aaKnown RBP eCLIP19.98■□□□□ 0.79
CHMP3-202ENST00000393773 ZBTB38Q8NAP3 1195 aaPredicted RBP19.98■□□□□ 0.79
CHMP3-202ENST00000393773 DCPSQ96C86 337 aaKnown RBP19.98■□□□□ 0.79
CHMP3-202ENST00000393773 SEC31BQ9NQW1 1179 aa19.98■□□□□ 0.79
CHMP3-202ENST00000393773 SAGE1Q9NXZ1 904 aa19.98■□□□□ 0.79
CHMP3-202ENST00000393773 UFL1O94874 794 aa19.97■□□□□ 0.79
CHMP3-202ENST00000393773 ZNF853P0CG23 659 aa19.97■□□□□ 0.79
CHMP3-202ENST00000393773 RBM26Q5T8P6 1007 aaKnown RBP19.97■□□□□ 0.79
CHMP3-202ENST00000393773 ADAMTS8Q9UP79 889 aa19.97■□□□□ 0.79
CHMP3-202ENST00000393773 A0A1B0GUL6 1792 aa19.97■□□□□ 0.79
CHMP3-202ENST00000393773 SLC10A3P09131 477 aa19.96■□□□□ 0.79
CHMP3-202ENST00000393773 C2orf69Q8N8R5 385 aa19.96■□□□□ 0.79
CHMP3-202ENST00000393773 PHAXQ9H814 394 aaKnown RBP19.96■□□□□ 0.79
CHMP3-202ENST00000393773 ZNF280AP59817 542 aaPredicted RBP19.95■□□□□ 0.78
CHMP3-202ENST00000393773 GOLGA2Q08379 1002 aa19.95■□□□□ 0.78
CHMP3-202ENST00000393773 CCDC102AQ96A19 550 aa19.95■□□□□ 0.78
CHMP3-202ENST00000393773 CDCA5Q96FF9 252 aa19.95■□□□□ 0.78
CHMP3-202ENST00000393773 ZC3H12CQ9C0D7 883 aaKnown RBP19.95■□□□□ 0.78
CHMP3-202ENST00000393773 LAMB1P07942 1786 aa19.94■□□□□ 0.78
CHMP3-202ENST00000393773 ZNF157P51786 506 aaPredicted RBP19.94■□□□□ 0.78
CHMP3-202ENST00000393773 KIF23Q02241 960 aaPredicted RBP19.94■□□□□ 0.78
CHMP3-202ENST00000393773 RIC3Q7Z5B4 369 aa19.94■□□□□ 0.78
CHMP3-202ENST00000393773 MYD88Q99836 296 aa19.94■□□□□ 0.78
CHMP3-202ENST00000393773 GGA1Q9UJY5 639 aa19.94■□□□□ 0.78
CHMP3-202ENST00000393773 PCCAP05165 728 aaPredicted RBP19.93■□□□□ 0.78
CHMP3-202ENST00000393773 SULF1Q8IWU6 871 aa19.93■□□□□ 0.78
CHMP3-202ENST00000393773 GMLQ99445 158 aa19.93■□□□□ 0.78
CHMP3-202ENST00000393773 ANKIB1Q9P2G1 1089 aa19.93■□□□□ 0.78
CHMP3-202ENST00000393773 ECM29Q5VYK3 1845 aa19.92■□□□□ 0.78
CHMP3-202ENST00000393773 CCDC152Q4G0S7 254 aa19.92■□□□□ 0.78
CHMP3-202ENST00000393773 RSBN1LQ6PCB5 846 aaPredicted RBP19.92■□□□□ 0.78
CHMP3-202ENST00000393773 CCDC191Q8NCU4 936 aa19.92■□□□□ 0.78
CHMP3-202ENST00000393773 AGBL3Q8NEM8 1001 aa19.92■□□□□ 0.78
CHMP3-202ENST00000393773 IFT57Q9NWB7 429 aa19.92■□□□□ 0.78
CHMP3-202ENST00000393773 RNF186Q9NXI6 227 aa19.92■□□□□ 0.78
CHMP3-202ENST00000393773 PDE8AO60658 829 aa19.91■□□□□ 0.78
CHMP3-202ENST00000393773 HSP90B1P14625 803 aaKnown RBP19.91■□□□□ 0.78
CHMP3-202ENST00000393773 DDX10Q13206 875 aaKnown RBP19.91■□□□□ 0.78
CHMP3-202ENST00000393773 ANGEL2Q5VTE6 544 aaKnown RBP19.91■□□□□ 0.78
CHMP3-202ENST00000393773 RASAL3Q86YV0 1011 aa19.91■□□□□ 0.78
CHMP3-202ENST00000393773 XDHP47989 1333 aa19.91■□□□□ 0.78
CHMP3-202ENST00000393773 CCDC85AQ96PX6 553 aaPredicted RBP19.9■□□□□ 0.78
CHMP3-202ENST00000393773 CWC25Q9NXE8 425 aaPredicted RBP19.9■□□□□ 0.78
CHMP3-202ENST00000393773 PITPNM2Q9BZ72 1349 aa19.9■□□□□ 0.78
CHMP3-202ENST00000393773 TRPA1O75762 1119 aa19.89■□□□□ 0.77
CHMP3-202ENST00000393773 SCARF1Q14162 830 aa19.89■□□□□ 0.77
CHMP3-202ENST00000393773 JARID2Q92833 1246 aaPredicted RBP19.89■□□□□ 0.77
CHMP3-202ENST00000393773 CSRNP1Q96S65 589 aa19.89■□□□□ 0.77
CHMP3-202ENST00000393773 MYOZ2Q9NPC6 264 aa19.89■□□□□ 0.77
CHMP3-202ENST00000393773 MED23Q9ULK4 1368 aa19.89■□□□□ 0.77
CHMP3-202ENST00000393773 GNAI1P63096 354 aa19.88■□□□□ 0.77
CHMP3-202ENST00000393773 METTL22Q9BUU2 404 aaPredicted RBP19.88■□□□□ 0.77
CHMP3-202ENST00000393773 CACNA1FO60840 1977 aa19.87■□□□□ 0.77
CHMP3-202ENST00000393773 G3V3G9 751 aa19.87■□□□□ 0.77
CHMP3-202ENST00000393773 ELL2O00472 640 aaPredicted RBP19.87■□□□□ 0.77
CHMP3-202ENST00000393773 FKBP1BP68106 108 aa19.87■□□□□ 0.77
CHMP3-202ENST00000393773 DCAF8Q5TAQ9 597 aa19.87■□□□□ 0.77
CHMP3-202ENST00000393773 ANKRD18AQ8IVF6 992 aa19.87■□□□□ 0.77
CHMP3-202ENST00000393773 C8orf58Q8NAV2 365 aa19.87■□□□□ 0.77
CHMP3-202ENST00000393773 HTTP42858 3142 aa19.87■□□□□ 0.77
CHMP3-202ENST00000393773 WTIPA6NIX2 430 aaPredicted RBP19.86■□□□□ 0.77
CHMP3-202ENST00000393773 USP17L8P0C7I0 530 aa19.86■□□□□ 0.77
CHMP3-202ENST00000393773 ATP2B4P23634 1241 aa19.86■□□□□ 0.77
CHMP3-202ENST00000393773 CTSWP56202 376 aa19.86■□□□□ 0.77
CHMP3-202ENST00000393773 USP17L3A6NCW0 530 aa19.85■□□□□ 0.77
CHMP3-202ENST00000393773 USP17L4A6NCW7 530 aa19.85■□□□□ 0.77
CHMP3-202ENST00000393773 APAF1O14727 1248 aa19.85■□□□□ 0.77
CHMP3-202ENST00000393773 USP17L1Q7RTZ2 530 aa19.85■□□□□ 0.77
CHMP3-202ENST00000393773 PODNQ7Z5L7 613 aa19.85■□□□□ 0.77
CHMP3-202ENST00000393773 SCAF8Q9UPN6 1271 aaKnown RBP19.85■□□□□ 0.77
CHMP3-202ENST00000393773 DDX58O95786 925 aaKnown RBP19.84■□□□□ 0.77
CHMP3-202ENST00000393773 IGKV5-2P06315 115 aa19.84■□□□□ 0.77
CHMP3-202ENST00000393773 SOX10P56693 466 aa19.84■□□□□ 0.77
CHMP3-202ENST00000393773 CALD1Q05682 793 aaKnown RBP19.84■□□□□ 0.77
CHMP3-202ENST00000393773 MOB2Q70IA6 237 aa19.84■□□□□ 0.77
CHMP3-202ENST00000393773 REM2Q8IYK8 340 aaPredicted RBP19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms