RNA–Protein interactions for RNA: ENST00000391611.6

PCNX4-202, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-202ENST00000391611 CCDC12Q8WUD4 166 aaPredicted RBP14.97□□□□□ -0.01
PCNX4-202ENST00000391611 SUCLG2Q96I99 432 aa14.97□□□□□ -0.01
PCNX4-202ENST00000391611 CEP131Q9UPN4 1083 aa14.97□□□□□ -0.01
PCNX4-202ENST00000391611 PBRM1Q86U86 1689 aa14.97□□□□□ -0.01
PCNX4-202ENST00000391611 KCNG4Q8TDN1 519 aa14.97□□□□□ -0.01
PCNX4-202ENST00000391611 LEO1Q8WVC0 666 aaPredicted RBP14.97□□□□□ -0.01
PCNX4-202ENST00000391611 ERBB4Q15303 1308 aa14.97□□□□□ -0.01
PCNX4-202ENST00000391611 ATP7AQ04656 1500 aa14.97□□□□□ -0.01
PCNX4-202ENST00000391611 NUP88Q99567 741 aaPredicted RBP14.97□□□□□ -0.01
PCNX4-202ENST00000391611 TSPYL1Q9H0U9 437 aa14.97□□□□□ -0.01
PCNX4-202ENST00000391611 DDX21Q9NR30 783 aaKnown RBP eCLIP14.97□□□□□ -0.01
PCNX4-202ENST00000391611 RNMTO43148 476 aaKnown RBP14.96□□□□□ -0.01
PCNX4-202ENST00000391611 LRMPQ12912 555 aa14.96□□□□□ -0.01
PCNX4-202ENST00000391611 ENOX2Q16206 610 aaKnown RBP14.96□□□□□ -0.01
PCNX4-202ENST00000391611 ZBTB43O43298 467 aa14.96□□□□□ -0.01
PCNX4-202ENST00000391611 KRT222Q8N1A0 295 aa14.96□□□□□ -0.01
PCNX4-202ENST00000391611 BMS1Q14692 1282 aaKnown RBP14.96□□□□□ -0.02
PCNX4-202ENST00000391611 NBPF6Q5VWK0 638 aa14.96□□□□□ -0.02
PCNX4-202ENST00000391611 NBPF4Q96M43 638 aa14.96□□□□□ -0.02
PCNX4-202ENST00000391611 ADCK5Q3MIX3 580 aa14.95□□□□□ -0.02
PCNX4-202ENST00000391611 SSH3Q8TE77 659 aa14.95□□□□□ -0.02
PCNX4-202ENST00000391611 SLU7O95391 586 aaKnown RBP14.95□□□□□ -0.02
PCNX4-202ENST00000391611 ATP2B3Q16720 1220 aa14.95□□□□□ -0.02
PCNX4-202ENST00000391611 SOGA3Q5TF21 947 aa14.95□□□□□ -0.02
PCNX4-202ENST00000391611 CCDC150Q8NCX0 1101 aa14.95□□□□□ -0.02
PCNX4-202ENST00000391611 MYRIPQ8NFW9 859 aa14.95□□□□□ -0.02
PCNX4-202ENST00000391611 NUTM2BA6NNL0 878 aaPredicted RBP14.95□□□□□ -0.02
PCNX4-202ENST00000391611 NUTM2EB1AL46 878 aaPredicted RBP14.95□□□□□ -0.02
PCNX4-202ENST00000391611 IL15P40933 162 aaPredicted RBP14.95□□□□□ -0.02
PCNX4-202ENST00000391611 NUTM2AQ8IVF1 878 aaPredicted RBP14.95□□□□□ -0.02
PCNX4-202ENST00000391611 CTCFLQ8NI51 663 aaPredicted RBP14.95□□□□□ -0.02
PCNX4-202ENST00000391611 EAF2Q96CJ1 260 aaPredicted RBP14.95□□□□□ -0.02
PCNX4-202ENST00000391611 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.94□□□□□ -0.02
PCNX4-202ENST00000391611 USP5P45974 858 aa14.94□□□□□ -0.02
PCNX4-202ENST00000391611 MFSD6Q6ZSS7 791 aa14.94□□□□□ -0.02
PCNX4-202ENST00000391611 DHX37Q8IY37 1157 aaKnown RBP14.94□□□□□ -0.02
PCNX4-202ENST00000391611 TARBP1Q13395 1621 aaKnown RBP14.94□□□□□ -0.02
PCNX4-202ENST00000391611 ADGBQ8N7X0 1667 aa14.94□□□□□ -0.02
PCNX4-202ENST00000391611 ZMYM3Q14202 1370 aa14.94□□□□□ -0.02
PCNX4-202ENST00000391611 STX17P56962 302 aa14.94□□□□□ -0.02
PCNX4-202ENST00000391611 ZNF594Q96JF6 807 aaPredicted RBP14.94□□□□□ -0.02
PCNX4-202ENST00000391611 MTMR6Q9Y217 621 aa14.94□□□□□ -0.02
PCNX4-202ENST00000391611 KDM5DQ9BY66 1539 aa14.94□□□□□ -0.02
PCNX4-202ENST00000391611 NLRP5P59047 1200 aa14.94□□□□□ -0.02
PCNX4-202ENST00000391611 IQCA1Q86XH1 822 aa14.94□□□□□ -0.02
PCNX4-202ENST00000391611 IP6K1Q92551 441 aa14.94□□□□□ -0.02
PCNX4-202ENST00000391611 SEC62Q99442 399 aaKnown RBP14.93□□□□□ -0.02
PCNX4-202ENST00000391611 MCM6Q14566 821 aa14.93□□□□□ -0.02
PCNX4-202ENST00000391611 TTC6Q86TZ1 520 aa14.93□□□□□ -0.02
PCNX4-202ENST00000391611 TPCN1Q9ULQ1 816 aa14.93□□□□□ -0.02
PCNX4-202ENST00000391611 N4BP3O15049 544 aa14.93□□□□□ -0.02
PCNX4-202ENST00000391611 ZNF500O60304 480 aaPredicted RBP14.93□□□□□ -0.02
PCNX4-202ENST00000391611 EIF4A1P60842 406 aaKnown RBP14.93□□□□□ -0.02
PCNX4-202ENST00000391611 TCEAL9Q9UHQ7 104 aa14.93□□□□□ -0.02
PCNX4-202ENST00000391611 A0A0D9SFI3 127 aa14.92□□□□□ -0.02
PCNX4-202ENST00000391611 CRACR2AQ9BSW2 395 aa14.92□□□□□ -0.02
PCNX4-202ENST00000391611 POGZQ7Z3K3 1410 aa14.92□□□□□ -0.02
PCNX4-202ENST00000391611 SAMD9LQ8IVG5 1584 aa14.92□□□□□ -0.02
PCNX4-202ENST00000391611 RNF113AO15541 343 aaKnown RBP14.92□□□□□ -0.02
PCNX4-202ENST00000391611 ZNF75DP51815 510 aa14.92□□□□□ -0.02
PCNX4-202ENST00000391611 KARSQ15046 597 aaKnown RBP14.92□□□□□ -0.02
PCNX4-202ENST00000391611 UTP14AQ9BVJ6 771 aaKnown RBP14.92□□□□□ -0.02
PCNX4-202ENST00000391611 ZNF853P0CG23 659 aa14.92□□□□□ -0.02
PCNX4-202ENST00000391611 SLC5A1P13866 664 aa14.92□□□□□ -0.02
PCNX4-202ENST00000391611 LMAN1P49257 510 aa14.92□□□□□ -0.02
PCNX4-202ENST00000391611 TNNI3KQ59H18 835 aa14.92□□□□□ -0.02
PCNX4-202ENST00000391611 CCDC43Q96MW1 224 aaKnown RBP14.92□□□□□ -0.02
PCNX4-202ENST00000391611 FPGT-TNNI3KV9GXZ4 949 aa14.92□□□□□ -0.02
PCNX4-202ENST00000391611 CT47A1Q5JQC4 288 aaPredicted RBP14.92□□□□□ -0.02
PCNX4-202ENST00000391611 PHF23Q9BUL5 403 aaPredicted RBP14.92□□□□□ -0.02
PCNX4-202ENST00000391611 MKNK2Q9HBH9 465 aa14.92□□□□□ -0.02
PCNX4-202ENST00000391611 ARHGEF5Q12774 1597 aa14.91□□□□□ -0.02
PCNX4-202ENST00000391611 KIAA0232Q92628 1395 aa14.91□□□□□ -0.02
PCNX4-202ENST00000391611 TAF3Q5VWG9 929 aa14.91□□□□□ -0.02
PCNX4-202ENST00000391611 CLSTN2Q9H4D0 955 aa14.91□□□□□ -0.02
PCNX4-202ENST00000391611 KDM5AP29375 1690 aaKnown RBP14.91□□□□□ -0.02
PCNX4-202ENST00000391611 NR1I2O75469 434 aa14.91□□□□□ -0.02
PCNX4-202ENST00000391611 FAM160A1Q05DH4 1040 aa14.91□□□□□ -0.02
PCNX4-202ENST00000391611 ZNF790Q6PG37 636 aa14.91□□□□□ -0.02
PCNX4-202ENST00000391611 BCL2L12Q9HB09 334 aa14.91□□□□□ -0.02
PCNX4-202ENST00000391611 PRDM15P57071 1507 aaPredicted RBP14.91□□□□□ -0.02
PCNX4-202ENST00000391611 CCDC148Q8NFR7 591 aa14.91□□□□□ -0.02
PCNX4-202ENST00000391611 WTAPQ15007 396 aa14.9□□□□□ -0.02
PCNX4-202ENST00000391611 GTF3C6Q969F1 213 aa14.9□□□□□ -0.02
PCNX4-202ENST00000391611 FAM89AQ96GI7 184 aa14.9□□□□□ -0.02
PCNX4-202ENST00000391611 ZKSCAN3Q9BRR0 538 aa14.9□□□□□ -0.02
PCNX4-202ENST00000391611 PODXL2Q9NZ53 605 aa14.9□□□□□ -0.02
PCNX4-202ENST00000391611 A0A087WWV3 80 aa14.9□□□□□ -0.02
PCNX4-202ENST00000391611 ZFYP08048 801 aaPredicted RBP14.9□□□□□ -0.02
PCNX4-202ENST00000391611 SPECC1Q5M775 1068 aa14.9□□□□□ -0.02
PCNX4-202ENST00000391611 ZFYVE27Q5T4F4 411 aa14.9□□□□□ -0.02
PCNX4-202ENST00000391611 CATIPQ7Z7H3 387 aa14.9□□□□□ -0.02
PCNX4-202ENST00000391611 DHX58Q96C10 678 aa14.9□□□□□ -0.02
PCNX4-202ENST00000391611 SBNO1A3KN83 1393 aa14.9□□□□□ -0.02
PCNX4-202ENST00000391611 ORAI2Q96SN7 254 aa14.9□□□□□ -0.02
PCNX4-202ENST00000391611 LZTFL1Q9NQ48 299 aa14.9□□□□□ -0.02
PCNX4-202ENST00000391611 A0A1B0GUL7 405 aa14.89□□□□□ -0.03
PCNX4-202ENST00000391611 MATR3P43243 847 aaKnown RBP eCLIP14.89□□□□□ -0.03
PCNX4-202ENST00000391611 CAVIN4Q5BKX8 364 aa14.89□□□□□ -0.03
PCNX4-202ENST00000391611 RNF41Q9H4P4 317 aaPredicted RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms