RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 CALM2P0DP24 149 aa6.65□□□□□ -1.34
RFX3-204ENST00000382004 CALM3P0DP25 149 aa6.65□□□□□ -1.34
RFX3-204ENST00000382004 GBP6Q6ZN66 633 aa6.65□□□□□ -1.34
RFX3-204ENST00000382004 TNPO1Q92973 898 aaKnown RBP6.65□□□□□ -1.34
RFX3-204ENST00000382004 ATP6V0A2Q9Y487 856 aa6.65□□□□□ -1.34
RFX3-204ENST00000382004 ATP11AP98196 1134 aa6.65□□□□□ -1.34
RFX3-204ENST00000382004 PCK1P35558 622 aa6.65□□□□□ -1.35
RFX3-204ENST00000382004 NCBP1Q09161 790 aaKnown RBP6.65□□□□□ -1.35
RFX3-204ENST00000382004 MPRIPQ6WCQ1 1025 aa6.65□□□□□ -1.35
RFX3-204ENST00000382004 HEATR3Q7Z4Q2 680 aa6.65□□□□□ -1.35
RFX3-204ENST00000382004 C10orf67Q8IYJ2 551 aa6.65□□□□□ -1.35
RFX3-204ENST00000382004 GOLGA1Q92805 767 aa6.65□□□□□ -1.35
RFX3-204ENST00000382004 GKAP1Q5VSY0 366 aaPredicted RBP6.65□□□□□ -1.35
RFX3-204ENST00000382004 LMBR1Q8WVP7 490 aa6.65□□□□□ -1.35
RFX3-204ENST00000382004 SNRKQ9NRH2 765 aa6.65□□□□□ -1.35
RFX3-204ENST00000382004 STX8Q9UNK0 236 aa6.65□□□□□ -1.35
RFX3-204ENST00000382004 BAG3O95817 575 aa6.65□□□□□ -1.35
RFX3-204ENST00000382004 RHOXF2BP0C7M4 288 aa6.65□□□□□ -1.35
RFX3-204ENST00000382004 NEDD9Q14511 834 aa6.65□□□□□ -1.35
RFX3-204ENST00000382004 DDX27Q96GQ7 796 aaKnown RBP6.65□□□□□ -1.35
RFX3-204ENST00000382004 CTAGE1Q96RT6 745 aa6.65□□□□□ -1.35
RFX3-204ENST00000382004 RHOXF2Q9BQY4 288 aa6.65□□□□□ -1.35
RFX3-204ENST00000382004 VCX3BQ9H321 246 aa6.65□□□□□ -1.35
RFX3-204ENST00000382004 KARSQ15046 597 aaKnown RBP6.64□□□□□ -1.35
RFX3-204ENST00000382004 MCM10Q7L590 875 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 SWAP70Q9UH65 585 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 RAPGEF2Q9Y4G8 1499 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 HGSO14964 777 aaPredicted RBP6.64□□□□□ -1.35
RFX3-204ENST00000382004 ASIC1P78348 528 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 SDCCAG8Q86SQ7 713 aaPredicted RBP6.64□□□□□ -1.35
RFX3-204ENST00000382004 ZNF692Q9BU19 519 aaPredicted RBP6.64□□□□□ -1.35
RFX3-204ENST00000382004 ANKRD30BQ9BXX2 1392 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 HCLS1P14317 486 aaPredicted RBP6.64□□□□□ -1.35
RFX3-204ENST00000382004 ANO6Q4KMQ2 910 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 PTPRGP23470 1445 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 BAZ1AQ9NRL2 1556 aaPredicted RBP6.64□□□□□ -1.35
RFX3-204ENST00000382004 FYCO1Q9BQS8 1478 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 E7EVH7 732 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 PPP2R5DQ14738 602 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 FMNL3Q8IVF7 1028 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 ZNF622Q969S3 477 aaKnown RBP eCLIP6.64□□□□□ -1.35
RFX3-204ENST00000382004 AGTPBP1Q9UPW5 1226 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP6.64□□□□□ -1.35
RFX3-204ENST00000382004 TXNDC9O14530 226 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 ZNF853P0CG23 659 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 SKILP12757 684 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 PRR16Q569H4 304 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 PPANQ9NQ55 473 aaKnown RBP6.64□□□□□ -1.35
RFX3-204ENST00000382004 AFG3L2Q9Y4W6 797 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 BIRC2Q13490 618 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 TAF7Q15545 349 aaPredicted RBP6.64□□□□□ -1.35
RFX3-204ENST00000382004 INF2Q27J81 1249 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 KIFC2Q96AC6 838 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 THUMPD2Q9BTF0 503 aaKnown RBP6.64□□□□□ -1.35
RFX3-204ENST00000382004 MTRF1LQ9UGC7 380 aaKnown RBP6.64□□□□□ -1.35
RFX3-204ENST00000382004 ZBTB21Q9ULJ3 1066 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 LUC7L2Q9Y383 392 aaKnown RBP6.64□□□□□ -1.35
RFX3-204ENST00000382004 UBE2HP62256 183 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 GABPAQ06546 454 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 NBPF11Q86T75 865 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 CACNA2D3Q8IZS8 1091 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 CCDC89Q8N998 374 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 JAKMIP2Q96AA8 810 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 TBC1D31Q96DN5 1066 aa6.64□□□□□ -1.35
RFX3-204ENST00000382004 SCAPERQ9BY12 1400 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 NBPF7P0C2Y1 421 aaPredicted RBP6.63□□□□□ -1.35
RFX3-204ENST00000382004 TSPY3P0CV98 308 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 TSPY8P0CW00 308 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 PRIMPOLQ96LW4 560 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 GUCA1BQ9UMX6 200 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 RABGAP1Q9Y3P9 1069 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 ERCC6LQ2NKX8 1250 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 LRRC43Q8N309 656 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 CLSTN2Q9H4D0 955 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 CECR2Q9BXF3 1484 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 F6X3S4 739 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 ARHGEF2Q92974 986 aaKnown RBP6.63□□□□□ -1.35
RFX3-204ENST00000382004 PPARDQ03181 441 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 CLUL1Q15846 466 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 AOPEPQ8N6M6 819 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 NKIRAS1Q9NYS0 192 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 SYT1P21579 422 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 HPDP32754 393 aaPredicted RBP6.63□□□□□ -1.35
RFX3-204ENST00000382004 MCM7P33993 719 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 ZNF131P52739 623 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 DIXDC1Q155Q3 683 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 IFIT1BQ5T764 474 aaKnown RBP6.63□□□□□ -1.35
RFX3-204ENST00000382004 NEK11Q8NG66 645 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 SEPT10Q9P0V9 454 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 ANKFY1Q9P2R3 1169 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 GIPC1O14908 333 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 KRT5P13647 590 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 USHBP1Q8N6Y0 703 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 MSANTD4Q8NCY6 345 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 NCOA7Q8NI08 942 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 CACYBPQ9HB71 228 aaKnown RBP6.63□□□□□ -1.35
RFX3-204ENST00000382004 F8W031 263 aaPredicted RBP6.63□□□□□ -1.35
RFX3-204ENST00000382004 PSMA7O14818 248 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 WTAPQ15007 396 aa6.63□□□□□ -1.35
RFX3-204ENST00000382004 RNF34Q969K3 372 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms