RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 RBM17Q96I25 401 aaKnown RBP22.72■■□□□ 1.23
PCDH8-202ENST00000377942 DNAI2Q9GZS0 605 aa22.72■■□□□ 1.23
PCDH8-202ENST00000377942 CFAP65Q6ZU64 1925 aaKnown RBP22.72■■□□□ 1.23
PCDH8-202ENST00000377942 TRIM21P19474 475 aaKnown RBP22.72■■□□□ 1.23
PCDH8-202ENST00000377942 TFIP11Q9UBB9 837 aaKnown RBP22.72■■□□□ 1.23
PCDH8-202ENST00000377942 KDM5AP29375 1690 aaKnown RBP22.72■■□□□ 1.23
PCDH8-202ENST00000377942 MAP7D2Q96T17 732 aa22.71■■□□□ 1.23
PCDH8-202ENST00000377942 PDE8AO60658 829 aa22.71■■□□□ 1.23
PCDH8-202ENST00000377942 POTEJP0CG39 1038 aa22.71■■□□□ 1.23
PCDH8-202ENST00000377942 UBE2HP62256 183 aa22.71■■□□□ 1.23
PCDH8-202ENST00000377942 CCDC112Q8NEF3 446 aa22.71■■□□□ 1.23
PCDH8-202ENST00000377942 CNBD1Q8NA66 436 aa22.71■■□□□ 1.23
PCDH8-202ENST00000377942 DENND2AQ9ULE3 1009 aa22.71■■□□□ 1.23
PCDH8-202ENST00000377942 PREX2Q70Z35 1606 aa22.71■■□□□ 1.23
PCDH8-202ENST00000377942 ZSCAN22P10073 491 aaPredicted RBP22.7■■□□□ 1.23
PCDH8-202ENST00000377942 SFPQP23246 707 aaKnown RBP eCLIP22.7■■□□□ 1.22
PCDH8-202ENST00000377942 WDR78Q5VTH9 848 aa22.7■■□□□ 1.22
PCDH8-202ENST00000377942 CCDC87Q9NVE4 849 aa22.7■■□□□ 1.22
PCDH8-202ENST00000377942 TTC37Q6PGP7 1564 aa22.7■■□□□ 1.22
PCDH8-202ENST00000377942 SETQ01105 290 aaPredicted RBP22.7■■□□□ 1.22
PCDH8-202ENST00000377942 KLHL10Q6JEL2 608 aa22.7■■□□□ 1.22
PCDH8-202ENST00000377942 HELBQ8NG08 1087 aaPredicted RBP22.69■■□□□ 1.22
PCDH8-202ENST00000377942 IQCEQ6IPM2 695 aa22.69■■□□□ 1.22
PCDH8-202ENST00000377942 ALG1Q9BT22 464 aa22.69■■□□□ 1.22
PCDH8-202ENST00000377942 ZCCHC11Q5TAX3 1644 aaKnown RBP22.69■■□□□ 1.22
PCDH8-202ENST00000377942 FAM135BQ49AJ0 1406 aa22.69■■□□□ 1.22
PCDH8-202ENST00000377942 LDHBP07195 334 aaKnown RBP22.69■■□□□ 1.22
PCDH8-202ENST00000377942 CCDC102BQ68D86 513 aa22.69■■□□□ 1.22
PCDH8-202ENST00000377942 Q6ZUG5 572 aa22.69■■□□□ 1.22
PCDH8-202ENST00000377942 FAM89AQ96GI7 184 aa22.69■■□□□ 1.22
PCDH8-202ENST00000377942 MPHOSPH6Q99547 160 aaKnown RBP22.69■■□□□ 1.22
PCDH8-202ENST00000377942 HELLSQ9NRZ9 838 aa22.69■■□□□ 1.22
PCDH8-202ENST00000377942 NLRP1Q9C000 1473 aa22.69■■□□□ 1.22
PCDH8-202ENST00000377942 KIF2AO00139 706 aaPredicted RBP22.68■■□□□ 1.22
PCDH8-202ENST00000377942 PRC1O43663 620 aa22.68■■□□□ 1.22
PCDH8-202ENST00000377942 RTL9Q8NET4 1388 aa22.68■■□□□ 1.22
PCDH8-202ENST00000377942 EIF4A1P60842 406 aaKnown RBP22.68■■□□□ 1.22
PCDH8-202ENST00000377942 AOX1Q06278 1338 aa22.68■■□□□ 1.22
PCDH8-202ENST00000377942 STXBP4Q6ZWJ1 553 aa22.68■■□□□ 1.22
PCDH8-202ENST00000377942 SEPT11Q9NVA2 429 aaKnown RBP22.68■■□□□ 1.22
PCDH8-202ENST00000377942 CHD1O14646 1710 aa22.68■■□□□ 1.22
PCDH8-202ENST00000377942 SPATA31E1Q6ZUB1 1445 aa22.68■■□□□ 1.22
PCDH8-202ENST00000377942 PRIM1P49642 420 aaKnown RBP22.68■■□□□ 1.22
PCDH8-202ENST00000377942 ARHGAP29Q52LW3 1261 aa22.68■■□□□ 1.22
PCDH8-202ENST00000377942 ZNF771Q7L3S4 317 aaPredicted RBP22.68■■□□□ 1.22
PCDH8-202ENST00000377942 HECW2Q9P2P5 1572 aa22.67■■□□□ 1.22
PCDH8-202ENST00000377942 CCDC171Q6TFL3 1326 aa22.67■■□□□ 1.22
PCDH8-202ENST00000377942 CHMLP26374 656 aa22.67■■□□□ 1.22
PCDH8-202ENST00000377942 NPHP4O75161 1426 aaPredicted RBP22.67■■□□□ 1.22
PCDH8-202ENST00000377942 AATKQ6ZMQ8 1374 aa22.67■■□□□ 1.22
PCDH8-202ENST00000377942 JDP2Q8WYK2 163 aa22.67■■□□□ 1.22
PCDH8-202ENST00000377942 BLMP54132 1417 aaPredicted RBP22.67■■□□□ 1.22
PCDH8-202ENST00000377942 F8W031 263 aaPredicted RBP22.67■■□□□ 1.22
PCDH8-202ENST00000377942 KIAA1328Q86T90 577 aa22.67■■□□□ 1.22
PCDH8-202ENST00000377942 ITGA6P23229 1130 aa22.66■■□□□ 1.22
PCDH8-202ENST00000377942 STX1AQ16623 288 aa22.66■■□□□ 1.22
PCDH8-202ENST00000377942 MAGEB6Q8N7X4 407 aa22.66■■□□□ 1.22
PCDH8-202ENST00000377942 NECAB1Q8N987 351 aa22.66■■□□□ 1.22
PCDH8-202ENST00000377942 KCNG4Q8TDN1 519 aa22.66■■□□□ 1.22
PCDH8-202ENST00000377942 STK32BQ9NY57 414 aa22.66■■□□□ 1.22
PCDH8-202ENST00000377942 RTL1A6NKG5 1358 aa22.66■■□□□ 1.22
PCDH8-202ENST00000377942 USP19O94966 1318 aa22.66■■□□□ 1.22
PCDH8-202ENST00000377942 VPS36Q86VN1 386 aa22.66■■□□□ 1.22
PCDH8-202ENST00000377942 RAB11FIP4Q86YS3 637 aa22.66■■□□□ 1.22
PCDH8-202ENST00000377942 PUM3Q15397 648 aaKnown RBP22.66■■□□□ 1.22
PCDH8-202ENST00000377942 METP08581 1390 aa22.66■■□□□ 1.22
PCDH8-202ENST00000377942 KIF24Q5T7B8 1368 aa22.66■■□□□ 1.22
PCDH8-202ENST00000377942 UGGT1Q9NYU2 1555 aa22.65■■□□□ 1.22
PCDH8-202ENST00000377942 ZNF496Q96IT1 587 aaPredicted RBP22.65■■□□□ 1.22
PCDH8-202ENST00000377942 SCLT1Q96NL6 688 aa22.65■■□□□ 1.22
PCDH8-202ENST00000377942 CREB3L3Q68CJ9 461 aa22.65■■□□□ 1.22
PCDH8-202ENST00000377942 ERMNQ8TAM6 284 aa22.65■■□□□ 1.22
PCDH8-202ENST00000377942 UBA5Q9GZZ9 404 aa22.65■■□□□ 1.22
PCDH8-202ENST00000377942 TMEM94Q12767 1356 aa22.65■■□□□ 1.22
PCDH8-202ENST00000377942 A1BGP04217 495 aa22.65■■□□□ 1.22
PCDH8-202ENST00000377942 TOP1P11387 765 aaKnown RBP22.65■■□□□ 1.22
PCDH8-202ENST00000377942 BRPF3Q9ULD4 1205 aa22.65■■□□□ 1.22
PCDH8-202ENST00000377942 ZSCAN12O43309 604 aa22.64■■□□□ 1.22
PCDH8-202ENST00000377942 DHX32Q7L7V1 743 aaKnown RBP22.64■■□□□ 1.22
PCDH8-202ENST00000377942 DNAJC10Q8IXB1 793 aa22.64■■□□□ 1.22
PCDH8-202ENST00000377942 MCM9Q9NXL9 1143 aa22.64■■□□□ 1.22
PCDH8-202ENST00000377942 A0A1B0GUL7 405 aa22.64■■□□□ 1.22
PCDH8-202ENST00000377942 SPA17Q15506 151 aa22.64■■□□□ 1.22
PCDH8-202ENST00000377942 CKAP2LQ8IYA6 745 aa22.64■■□□□ 1.22
PCDH8-202ENST00000377942 TAF4BQ92750 862 aa22.64■■□□□ 1.22
PCDH8-202ENST00000377942 LRRC2Q9BYS8 371 aa22.64■■□□□ 1.22
PCDH8-202ENST00000377942 SLC4A8Q2Y0W8 1093 aa22.64■■□□□ 1.21
PCDH8-202ENST00000377942 TNNI3KQ59H18 835 aa22.64■■□□□ 1.21
PCDH8-202ENST00000377942 PAF1Q8N7H5 531 aa22.64■■□□□ 1.21
PCDH8-202ENST00000377942 FPGT-TNNI3KV9GXZ4 949 aa22.64■■□□□ 1.21
PCDH8-202ENST00000377942 CALML3P27482 149 aa22.64■■□□□ 1.21
PCDH8-202ENST00000377942 FAM98CQ17RN3 349 aaKnown RBP22.64■■□□□ 1.21
PCDH8-202ENST00000377942 KLHL40Q2TBA0 621 aa22.64■■□□□ 1.21
PCDH8-202ENST00000377942 CACNA2D4Q7Z3S7 1137 aa22.64■■□□□ 1.21
PCDH8-202ENST00000377942 MPNDQ8N594 471 aa22.64■■□□□ 1.21
PCDH8-202ENST00000377942 ERLIN1O75477 346 aa22.63■■□□□ 1.21
PCDH8-202ENST00000377942 ATP7BP35670 1465 aa22.63■■□□□ 1.21
PCDH8-202ENST00000377942 PICALMQ13492 652 aa22.63■■□□□ 1.21
PCDH8-202ENST00000377942 GCKRQ14397 625 aa22.63■■□□□ 1.21
PCDH8-202ENST00000377942 ERVK-7P63135 1459 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms