RNA–Protein interactions for RNA: ENST00000377453.8

CLN5-201, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLN5, Length 2,629 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-201ENST00000377453 IFFO2Q5TF58 517 aa24.08■■□□□ 1.44
CLN5-201ENST00000377453 USPL1Q5W0Q7 1092 aa24.08■■□□□ 1.44
CLN5-201ENST00000377453 BCL11BQ9C0K0 894 aaPredicted RBP24.08■■□□□ 1.44
CLN5-201ENST00000377453 JCADQ9P266 1359 aa24.07■■□□□ 1.44
CLN5-201ENST00000377453 ERCC4Q92889 916 aaPredicted RBP24.07■■□□□ 1.44
CLN5-201ENST00000377453 ZNF594Q96JF6 807 aaPredicted RBP24.07■■□□□ 1.44
CLN5-201ENST00000377453 HMG20BQ9P0W2 317 aa24.07■■□□□ 1.44
CLN5-201ENST00000377453 OVOS2A0A0G2JMS6 1433 aa24.07■■□□□ 1.44
CLN5-201ENST00000377453 ELP1O95163 1332 aa24.07■■□□□ 1.44
CLN5-201ENST00000377453 SIPA1L3O60292 1781 aaPredicted RBP24.07■■□□□ 1.44
CLN5-201ENST00000377453 CCDC186Q7Z3E2 898 aa24.07■■□□□ 1.44
CLN5-201ENST00000377453 SCAND2PQ9GZW5 306 aaPredicted RBP24.07■■□□□ 1.44
CLN5-201ENST00000377453 DRC7Q8IY82 874 aa24.06■■□□□ 1.44
CLN5-201ENST00000377453 FBXW7Q969H0 707 aa24.06■■□□□ 1.44
CLN5-201ENST00000377453 CLSTN2Q9H4D0 955 aa24.06■■□□□ 1.44
CLN5-201ENST00000377453 SNRPA1P09661 255 aaKnown RBP24.05■■□□□ 1.44
CLN5-201ENST00000377453 MCMDC2Q4G0Z9 681 aa24.05■■□□□ 1.44
CLN5-201ENST00000377453 PHRF1Q9P1Y6 1649 aaKnown RBP24.05■■□□□ 1.44
CLN5-201ENST00000377453 TSGA10IPQ3SY00 556 aa24.05■■□□□ 1.44
CLN5-201ENST00000377453 PRDM10Q9NQV6 1147 aa24.05■■□□□ 1.44
CLN5-201ENST00000377453 ZNF142P52746 1687 aaPredicted RBP24.04■■□□□ 1.44
CLN5-201ENST00000377453 HAUS7Q99871 368 aa24.04■■□□□ 1.44
CLN5-201ENST00000377453 TTLL7Q6ZT98 887 aa24.04■■□□□ 1.44
CLN5-201ENST00000377453 TRIM5Q9C035 493 aa24.04■■□□□ 1.44
CLN5-201ENST00000377453 GPHNQ9NQX3 736 aaPredicted RBP24.04■■□□□ 1.44
CLN5-201ENST00000377453 CTDNEP1O95476 244 aa24.03■■□□□ 1.44
CLN5-201ENST00000377453 LRRC24Q50LG9 513 aa24.03■■□□□ 1.44
CLN5-201ENST00000377453 TTLL5Q6EMB2 1281 aa24.03■■□□□ 1.44
CLN5-201ENST00000377453 MRC1P22897 1456 aa24.02■■□□□ 1.44
CLN5-201ENST00000377453 RABL6Q3YEC7 729 aaPredicted RBP24.02■■□□□ 1.44
CLN5-201ENST00000377453 IFNL2Q8IZJ0 200 aa24.02■■□□□ 1.44
CLN5-201ENST00000377453 ALDH8A1Q9H2A2 487 aaPredicted RBP24.02■■□□□ 1.44
CLN5-201ENST00000377453 CASP7P55210 303 aa24.02■■□□□ 1.44
CLN5-201ENST00000377453 GOLPH3LQ9H4A5 285 aa24.02■■□□□ 1.44
CLN5-201ENST00000377453 U3KPZ7 1027 aaPredicted RBP24.02■■□□□ 1.44
CLN5-201ENST00000377453 NBPF26B4DH59 902 aa24.01■■□□□ 1.43
CLN5-201ENST00000377453 RIOK3O14730 519 aaKnown RBP24.01■■□□□ 1.43
CLN5-201ENST00000377453 ZNF165P49910 485 aa24.01■■□□□ 1.43
CLN5-201ENST00000377453 HSP90AB3PQ58FF7 597 aa24.01■■□□□ 1.43
CLN5-201ENST00000377453 NBPF14Q5TI25 921 aa24.01■■□□□ 1.43
CLN5-201ENST00000377453 NBPF10Q6P3W6 841 aaKnown RBP24.01■■□□□ 1.43
CLN5-201ENST00000377453 C11orf57Q6ZUT1 292 aaPredicted RBP24.01■■□□□ 1.43
CLN5-201ENST00000377453 RAB11FIP4Q86YS3 637 aa24.01■■□□□ 1.43
CLN5-201ENST00000377453 NBPF15Q8N660 670 aa24.01■■□□□ 1.43
CLN5-201ENST00000377453 CCDC85AQ96PX6 553 aaPredicted RBP24.01■■□□□ 1.43
CLN5-201ENST00000377453 TAOK2Q9UL54 1235 aa24.01■■□□□ 1.43
CLN5-201ENST00000377453 KRT32Q14532 448 aa24.01■■□□□ 1.43
CLN5-201ENST00000377453 DDX19AQ9NUU7 478 aaKnown RBP24.01■■□□□ 1.43
CLN5-201ENST00000377453 ARID5BQ14865 1188 aa24■■□□□ 1.43
CLN5-201ENST00000377453 NSUN7Q8NE18 718 aaKnown RBP24■■□□□ 1.43
CLN5-201ENST00000377453 PRIMPOLQ96LW4 560 aa24■■□□□ 1.43
CLN5-201ENST00000377453 FMNL2Q96PY5 1086 aa24■■□□□ 1.43
CLN5-201ENST00000377453 ZBTB3Q9H5J0 574 aa24■■□□□ 1.43
CLN5-201ENST00000377453 PTPDC1A2A3K4 754 aa24■■□□□ 1.43
CLN5-201ENST00000377453 CABP4P57796 275 aa24■■□□□ 1.43
CLN5-201ENST00000377453 FOXO4P98177 505 aa24■■□□□ 1.43
CLN5-201ENST00000377453 CCDC144BQ3MJ40 725 aa24■■□□□ 1.43
CLN5-201ENST00000377453 ATG9AQ7Z3C6 839 aa24■■□□□ 1.43
CLN5-201ENST00000377453 CCDC144CPQ8IYA2 1237 aa24■■□□□ 1.43
CLN5-201ENST00000377453 KBTBD3Q8NAB2 608 aa24■■□□□ 1.43
CLN5-201ENST00000377453 BCL2L12Q9HB09 334 aa24■■□□□ 1.43
CLN5-201ENST00000377453 ZNF75DP51815 510 aa23.99■■□□□ 1.43
CLN5-201ENST00000377453 OTUD7BQ6GQQ9 843 aa23.99■■□□□ 1.43
CLN5-201ENST00000377453 PUS3Q9BZE2 481 aaKnown RBP23.99■■□□□ 1.43
CLN5-201ENST00000377453 ADD1P35611 737 aaKnown RBP23.99■■□□□ 1.43
CLN5-201ENST00000377453 C16orf45Q96MC5 204 aaPredicted RBP23.99■■□□□ 1.43
CLN5-201ENST00000377453 MAP7D2Q96T17 732 aa23.99■■□□□ 1.43
CLN5-201ENST00000377453 A1BGP04217 495 aa23.98■■□□□ 1.43
CLN5-201ENST00000377453 HMGN5P82970 282 aaKnown RBP23.98■■□□□ 1.43
CLN5-201ENST00000377453 PAG1Q9NWQ8 432 aa23.98■■□□□ 1.43
CLN5-201ENST00000377453 USP28Q96RU2 1077 aa23.98■■□□□ 1.43
CLN5-201ENST00000377453 KIF3AQ9Y496 699 aa23.97■■□□□ 1.43
CLN5-201ENST00000377453 GOLGA6L6A8MZA4 724 aa23.97■■□□□ 1.43
CLN5-201ENST00000377453 HAND2P61296 217 aa23.97■■□□□ 1.43
CLN5-201ENST00000377453 RBM43Q6ZSC3 357 aaKnown RBP23.97■■□□□ 1.43
CLN5-201ENST00000377453 CCAR1Q8IX12 1150 aaKnown RBP23.97■■□□□ 1.43
CLN5-201ENST00000377453 C1orf167Q5SNV9 1468 aa23.97■■□□□ 1.43
CLN5-201ENST00000377453 ZNF330Q9Y3S2 320 aaPredicted RBP23.96■■□□□ 1.43
CLN5-201ENST00000377453 CAMTA1Q9Y6Y1 1673 aa23.96■■□□□ 1.43
CLN5-201ENST00000377453 M0R2C6 588 aa23.96■■□□□ 1.43
CLN5-201ENST00000377453 PFKFB2O60825 505 aa23.96■■□□□ 1.43
CLN5-201ENST00000377453 DHX32Q7L7V1 743 aaKnown RBP23.96■■□□□ 1.43
CLN5-201ENST00000377453 PLA2G4DQ86XP0 818 aa23.96■■□□□ 1.43
CLN5-201ENST00000377453 SMARCC2Q8TAQ2 1214 aa23.96■■□□□ 1.43
CLN5-201ENST00000377453 E7EWF7 191 aa23.95■■□□□ 1.42
CLN5-201ENST00000377453 PLBD2Q8NHP8 589 aa23.95■■□□□ 1.42
CLN5-201ENST00000377453 CACTINQ8WUQ7 758 aaKnown RBP23.95■■□□□ 1.42
CLN5-201ENST00000377453 DCAF5Q96JK2 942 aa23.95■■□□□ 1.42
CLN5-201ENST00000377453 PKNOX2Q96KN3 472 aa23.95■■□□□ 1.42
CLN5-201ENST00000377453 GJB4Q9NTQ9 266 aa23.95■■□□□ 1.42
CLN5-201ENST00000377453 TRPM3Q9HCF6 1732 aaPredicted RBP23.95■■□□□ 1.42
CLN5-201ENST00000377453 ADAMTS7Q9UKP4 1686 aa23.95■■□□□ 1.42
CLN5-201ENST00000377453 HSPD1P10809 573 aaKnown RBP23.95■■□□□ 1.42
CLN5-201ENST00000377453 ZSCAN25Q6NSZ9 544 aa23.95■■□□□ 1.42
CLN5-201ENST00000377453 TDRD7Q8NHU6 1098 aaKnown RBP23.95■■□□□ 1.42
CLN5-201ENST00000377453 CLIP2Q9UDT6 1046 aa23.95■■□□□ 1.42
CLN5-201ENST00000377453 MAST3O60307 1309 aa23.94■■□□□ 1.42
CLN5-201ENST00000377453 AFDNP55196 1824 aaKnown RBP23.94■■□□□ 1.42
CLN5-201ENST00000377453 ILDR1Q86SU0 546 aaPredicted RBP23.94■■□□□ 1.42
CLN5-201ENST00000377453 SCN11AQ9UI33 1791 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms