RNA–Protein interactions for RNA: ENST00000376575.7

DDR1-228, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best) BASIC

Gene DDR1, Length 732 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-228ENST00000376575 MPNDQ8N594 471 aa24.89■■□□□ 1.58
DDR1-228ENST00000376575 MPHOSPH8Q99549 860 aa24.89■■□□□ 1.58
DDR1-228ENST00000376575 TMX4Q9H1E5 349 aaPredicted RBP24.89■■□□□ 1.58
DDR1-228ENST00000376575 PTPN12Q05209 780 aaKnown RBP24.88■■□□□ 1.57
DDR1-228ENST00000376575 DPP8Q6V1X1 898 aaPredicted RBP24.87■■□□□ 1.57
DDR1-228ENST00000376575 VPS33BQ9H267 617 aa24.87■■□□□ 1.57
DDR1-228ENST00000376575 RIPOR2Q9Y4F9 1068 aa24.87■■□□□ 1.57
DDR1-228ENST00000376575 A0A1B0GUL6 1792 aa24.87■■□□□ 1.57
DDR1-228ENST00000376575 LDHAL6AQ6ZMR3 332 aa24.86■■□□□ 1.57
DDR1-228ENST00000376575 CHMP4BQ9H444 224 aaKnown RBP24.86■■□□□ 1.57
DDR1-228ENST00000376575 POLLQ9UGP5 575 aa24.86■■□□□ 1.57
DDR1-228ENST00000376575 NSFL1CQ9UNZ2 370 aaKnown RBP24.86■■□□□ 1.57
DDR1-228ENST00000376575 XDHP47989 1333 aa24.86■■□□□ 1.57
DDR1-228ENST00000376575 ATP8B2P98198 1209 aa24.85■■□□□ 1.57
DDR1-228ENST00000376575 KLHDC4Q8TBB5 520 aa24.85■■□□□ 1.57
DDR1-228ENST00000376575 C1orf115Q9H7X2 142 aa24.85■■□□□ 1.57
DDR1-228ENST00000376575 COPRSQ9NQ92 184 aa24.85■■□□□ 1.57
DDR1-228ENST00000376575 PNMA6EA0A0J9YXQ4 647 aa24.84■■□□□ 1.57
DDR1-228ENST00000376575 SRGAP3O43295 1099 aa24.84■■□□□ 1.57
DDR1-228ENST00000376575 CHRNDQ07001 517 aa24.84■■□□□ 1.57
DDR1-228ENST00000376575 POLA2Q14181 598 aa24.84■■□□□ 1.57
DDR1-228ENST00000376575 TAF7LQ5H9L4 462 aa24.84■■□□□ 1.57
DDR1-228ENST00000376575 C9orf131Q5VYM1 1079 aa24.84■■□□□ 1.57
DDR1-228ENST00000376575 SUPT20HQ8NEM7 779 aa24.84■■□□□ 1.57
DDR1-228ENST00000376575 TBC1D16Q8TBP0 767 aa24.84■■□□□ 1.57
DDR1-228ENST00000376575 PUS3Q9BZE2 481 aaKnown RBP24.84■■□□□ 1.57
DDR1-228ENST00000376575 ZNF277Q9NRM2 450 aaPredicted RBP24.84■■□□□ 1.57
DDR1-228ENST00000376575 FBXO3Q9UK99 471 aa24.84■■□□□ 1.57
DDR1-228ENST00000376575 SUPT16HQ9Y5B9 1047 aaKnown RBP24.84■■□□□ 1.57
DDR1-228ENST00000376575 IARSP41252 1262 aaKnown RBP24.83■■□□□ 1.57
DDR1-228ENST00000376575 SSH3Q8TE77 659 aa24.83■■□□□ 1.57
DDR1-228ENST00000376575 ANKRD2Q9GZV1 360 aa24.83■■□□□ 1.57
DDR1-228ENST00000376575 LRRC24Q50LG9 513 aa24.82■■□□□ 1.56
DDR1-228ENST00000376575 CEP85Q6P2H3 762 aa24.82■■□□□ 1.56
DDR1-228ENST00000376575 ANKIB1Q9P2G1 1089 aa24.82■■□□□ 1.56
DDR1-228ENST00000376575 ZC3H4Q9UPT8 1303 aaKnown RBP24.82■■□□□ 1.56
DDR1-228ENST00000376575 COL4A5P29400 1685 aa24.81■■□□□ 1.56
DDR1-228ENST00000376575 EYA2O00167 538 aa24.81■■□□□ 1.56
DDR1-228ENST00000376575 CIAO1O76071 339 aa24.81■■□□□ 1.56
DDR1-228ENST00000376575 ATP2B4P23634 1241 aa24.81■■□□□ 1.56
DDR1-228ENST00000376575 KIAA2012Q0VF49 1180 aa24.81■■□□□ 1.56
DDR1-228ENST00000376575 CNNM1Q9NRU3 951 aa24.81■■□□□ 1.56
DDR1-228ENST00000376575 RNF181Q9P0P0 153 aa24.81■■□□□ 1.56
DDR1-228ENST00000376575 GGA1Q9UJY5 639 aa24.81■■□□□ 1.56
DDR1-228ENST00000376575 LEMD3Q9Y2U8 911 aa24.81■■□□□ 1.56
DDR1-228ENST00000376575 WTIPA6NIX2 430 aaPredicted RBP24.8■■□□□ 1.56
DDR1-228ENST00000376575 ATG9AQ7Z3C6 839 aa24.8■■□□□ 1.56
DDR1-228ENST00000376575 VGLL2Q8N8G2 317 aa24.8■■□□□ 1.56
DDR1-228ENST00000376575 MROH5Q6ZUA9 1318 aa24.8■■□□□ 1.56
DDR1-228ENST00000376575 PA2G4Q9UQ80 394 aaKnown RBP24.79■■□□□ 1.56
DDR1-228ENST00000376575 IRS2Q9Y4H2 1338 aa24.79■■□□□ 1.56
DDR1-228ENST00000376575 UFL1O94874 794 aa24.78■■□□□ 1.56
DDR1-228ENST00000376575 RPAP2Q8IXW5 612 aaPredicted RBP24.78■■□□□ 1.56
DDR1-228ENST00000376575 TIAM2Q8IVF5 1701 aa24.78■■□□□ 1.56
DDR1-228ENST00000376575 C6orf229H3BNL8 230 aa24.77■■□□□ 1.56
DDR1-228ENST00000376575 TAF5LO75529 589 aa24.77■■□□□ 1.56
DDR1-228ENST00000376575 AOC3Q16853 763 aa24.77■■□□□ 1.56
DDR1-228ENST00000376575 WASHC4Q2M389 1173 aa24.77■■□□□ 1.56
DDR1-228ENST00000376575 C15orf52Q6ZUT6 534 aaKnown RBP24.77■■□□□ 1.56
DDR1-228ENST00000376575 SIRT2Q8IXJ6 389 aa24.77■■□□□ 1.56
DDR1-228ENST00000376575 CRBNQ96SW2 442 aa24.77■■□□□ 1.56
DDR1-228ENST00000376575 EYA3Q99504 573 aa24.77■■□□□ 1.56
DDR1-228ENST00000376575 FZD9O00144 591 aa24.76■■□□□ 1.55
DDR1-228ENST00000376575 PPIP5K2O43314 1243 aa24.76■■□□□ 1.55
DDR1-228ENST00000376575 HELBQ8NG08 1087 aaPredicted RBP24.76■■□□□ 1.55
DDR1-228ENST00000376575 NOP58Q9Y2X3 529 aaKnown RBP24.76■■□□□ 1.55
DDR1-228ENST00000376575 ZNF804BA4D1E1 1349 aa24.76■■□□□ 1.55
DDR1-228ENST00000376575 MED23Q9ULK4 1368 aa24.76■■□□□ 1.55
DDR1-228ENST00000376575 IL15P40933 162 aaPredicted RBP24.75■■□□□ 1.55
DDR1-228ENST00000376575 LARGE2Q8N3Y3 721 aa24.75■■□□□ 1.55
DDR1-228ENST00000376575 GPR101Q96P66 508 aaPredicted RBP24.75■■□□□ 1.55
DDR1-228ENST00000376575 SNAP23O00161 211 aa24.74■■□□□ 1.55
DDR1-228ENST00000376575 PDE8BO95263 885 aa24.74■■□□□ 1.55
DDR1-228ENST00000376575 SIL1Q9H173 461 aa24.74■■□□□ 1.55
DDR1-228ENST00000376575 UBE4AQ14139 1066 aa24.73■■□□□ 1.55
DDR1-228ENST00000376575 METTL24Q5JXM2 366 aa24.73■■□□□ 1.55
DDR1-228ENST00000376575 ZC3H12CQ9C0D7 883 aaKnown RBP24.73■■□□□ 1.55
DDR1-228ENST00000376575 FGFR2P21802 821 aa24.72■■□□□ 1.55
DDR1-228ENST00000376575 TXNRD3Q86VQ6 643 aa24.72■■□□□ 1.55
DDR1-228ENST00000376575 JDP2Q8WYK2 163 aa24.72■■□□□ 1.55
DDR1-228ENST00000376575 KLRK1P26718 216 aa24.71■■□□□ 1.55
DDR1-228ENST00000376575 AAMPQ13685 434 aa24.71■■□□□ 1.55
DDR1-228ENST00000376575 RIMBP2O15034 1052 aa24.7■■□□□ 1.54
DDR1-228ENST00000376575 YY1P25490 414 aa24.7■■□□□ 1.54
DDR1-228ENST00000376575 NIM1KQ8IY84 436 aa24.7■■□□□ 1.54
DDR1-228ENST00000376575 ZNRF3Q9ULT6 936 aa24.7■■□□□ 1.54
DDR1-228ENST00000376575 YDJCA8MPS7 323 aa24.69■■□□□ 1.54
DDR1-228ENST00000376575 PCDHB15Q9Y5E8 787 aa24.69■■□□□ 1.54
DDR1-228ENST00000376575 SCN9AQ15858 1988 aa24.68■■□□□ 1.54
DDR1-228ENST00000376575 SASH1O94885 1247 aa24.68■■□□□ 1.54
DDR1-228ENST00000376575 KCNJ4P48050 445 aa24.68■■□□□ 1.54
DDR1-228ENST00000376575 CEP126Q9P2H0 1117 aa24.68■■□□□ 1.54
DDR1-228ENST00000376575 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.68■■□□□ 1.54
DDR1-228ENST00000376575 GLTPD2A6NH11 291 aa24.67■■□□□ 1.54
DDR1-228ENST00000376575 HMMRO75330 724 aa24.67■■□□□ 1.54
DDR1-228ENST00000376575 SURF6O75683 361 aaKnown RBP24.67■■□□□ 1.54
DDR1-228ENST00000376575 G3BP1Q13283 466 aaKnown RBP eCLIP24.67■■□□□ 1.54
DDR1-228ENST00000376575 PUM3Q15397 648 aaKnown RBP24.67■■□□□ 1.54
DDR1-228ENST00000376575 ZNF541Q9H0D2 1346 aa24.66■■□□□ 1.54
DDR1-228ENST00000376575 ECE2O60344 883 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms