RNA–Protein interactions for RNA: ENST00000372542.5

SNX21-204, Transcript of sorting nexin family member 21, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNX21, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-204ENST00000372542 GOLIM4O00461 696 aa28.43■■■□□ 2.14
SNX21-204ENST00000372542 LRRFIP1Q32MZ4 808 aaKnown RBP28.43■■■□□ 2.14
SNX21-204ENST00000372542 FNBP4Q8N3X1 1017 aaPredicted RBP28.43■■■□□ 2.14
SNX21-204ENST00000372542 CCDC85AQ96PX6 553 aaPredicted RBP28.43■■■□□ 2.14
SNX21-204ENST00000372542 RIPOR2Q9Y4F9 1068 aa28.43■■■□□ 2.14
SNX21-204ENST00000372542 NDUFB9Q9Y6M9 179 aa28.43■■■□□ 2.14
SNX21-204ENST00000372542 RIC1Q4ADV7 1423 aa28.43■■■□□ 2.14
SNX21-204ENST00000372542 ADCK5Q3MIX3 580 aa28.43■■■□□ 2.14
SNX21-204ENST00000372542 GORABQ5T7V8 394 aa28.43■■■□□ 2.14
SNX21-204ENST00000372542 U3KPZ7 1027 aaPredicted RBP28.43■■■□□ 2.14
SNX21-204ENST00000372542 HSP90B1P14625 803 aaKnown RBP28.42■■■□□ 2.14
SNX21-204ENST00000372542 PKP1Q13835 747 aa28.42■■■□□ 2.14
SNX21-204ENST00000372542 KRT32Q14532 448 aa28.42■■■□□ 2.14
SNX21-204ENST00000372542 LDHAL6AQ6ZMR3 332 aa28.42■■■□□ 2.14
SNX21-204ENST00000372542 XAGE2Q96GT9 111 aa28.42■■■□□ 2.14
SNX21-204ENST00000372542 ZDHHC9Q9Y397 364 aa28.42■■■□□ 2.14
SNX21-204ENST00000372542 MYH14Q7Z406 1995 aaKnown RBP28.42■■■□□ 2.14
SNX21-204ENST00000372542 SPATA31A6Q5VVP1 1343 aa28.42■■■□□ 2.14
SNX21-204ENST00000372542 CAMTA2O94983 1202 aa28.41■■■□□ 2.14
SNX21-204ENST00000372542 METTL24Q5JXM2 366 aa28.41■■■□□ 2.14
SNX21-204ENST00000372542 TTC39AQ5SRH9 613 aa28.41■■■□□ 2.14
SNX21-204ENST00000372542 SH2B1Q9NRF2 756 aaPredicted RBP28.41■■■□□ 2.14
SNX21-204ENST00000372542 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.41■■■□□ 2.14
SNX21-204ENST00000372542 BRD1O95696 1058 aa28.4■■■□□ 2.14
SNX21-204ENST00000372542 UTP14AQ9BVJ6 771 aaKnown RBP28.4■■■□□ 2.14
SNX21-204ENST00000372542 ALDH8A1Q9H2A2 487 aaPredicted RBP28.4■■■□□ 2.14
SNX21-204ENST00000372542 LRP5O75197 1615 aa28.39■■■□□ 2.14
SNX21-204ENST00000372542 ATP2B3Q16720 1220 aa28.39■■■□□ 2.14
SNX21-204ENST00000372542 CNNM1Q9NRU3 951 aa28.39■■■□□ 2.14
SNX21-204ENST00000372542 ZMYM1Q5SVZ6 1142 aa28.39■■■□□ 2.13
SNX21-204ENST00000372542 KCNQ2O43526 872 aa28.38■■■□□ 2.13
SNX21-204ENST00000372542 ANKRD1Q15327 319 aa28.38■■■□□ 2.13
SNX21-204ENST00000372542 SUSD4Q5VX71 490 aa28.38■■■□□ 2.13
SNX21-204ENST00000372542 BLOC1S2Q6QNY1 142 aa28.38■■■□□ 2.13
SNX21-204ENST00000372542 ZNF652Q9Y2D9 606 aa28.38■■■□□ 2.13
SNX21-204ENST00000372542 BCORQ6W2J9 1755 aa28.37■■■□□ 2.13
SNX21-204ENST00000372542 RNF113AO15541 343 aaKnown RBP28.37■■■□□ 2.13
SNX21-204ENST00000372542 CPA1P15085 419 aa28.37■■■□□ 2.13
SNX21-204ENST00000372542 ADORA1P30542 326 aa28.36■■■□□ 2.13
SNX21-204ENST00000372542 LAMB2P55268 1798 aa28.36■■■□□ 2.13
SNX21-204ENST00000372542 ZFYP08048 801 aaPredicted RBP28.36■■■□□ 2.13
SNX21-204ENST00000372542 ZNF512BQ96KM6 892 aaPredicted RBP28.36■■■□□ 2.13
SNX21-204ENST00000372542 DSCC1Q9BVC3 393 aa28.36■■■□□ 2.13
SNX21-204ENST00000372542 L1TD1Q5T7N2 865 aaKnown RBP28.35■■■□□ 2.13
SNX21-204ENST00000372542 MCTP1Q6DN14 999 aa28.35■■■□□ 2.13
SNX21-204ENST00000372542 VGLL2Q8N8G2 317 aa28.35■■■□□ 2.13
SNX21-204ENST00000372542 SEC62Q99442 399 aaKnown RBP28.35■■■□□ 2.13
SNX21-204ENST00000372542 RGL2O15211 777 aa28.34■■■□□ 2.13
SNX21-204ENST00000372542 RPS6KB1P23443 525 aa28.34■■■□□ 2.13
SNX21-204ENST00000372542 MROH5Q6ZUA9 1318 aa28.34■■■□□ 2.13
SNX21-204ENST00000372542 WDR33Q9C0J8 1336 aaKnown RBP28.34■■■□□ 2.13
SNX21-204ENST00000372542 CLEC4GQ6UXB4 293 aa28.34■■■□□ 2.13
SNX21-204ENST00000372542 CCDC129Q6ZRS4 1044 aa28.34■■■□□ 2.13
SNX21-204ENST00000372542 THSD7AQ9UPZ6 1657 aa28.33■■■□□ 2.13
SNX21-204ENST00000372542 PDE8BO95263 885 aa28.33■■■□□ 2.13
SNX21-204ENST00000372542 USP21Q9UK80 565 aa28.33■■■□□ 2.13
SNX21-204ENST00000372542 RTL9Q8NET4 1388 aa28.33■■■□□ 2.13
SNX21-204ENST00000372542 DDX60Q8IY21 1712 aaKnown RBP28.32■■■□□ 2.12
SNX21-204ENST00000372542 FKBP4Q02790 459 aaKnown RBP eCLIP28.32■■■□□ 2.12
SNX21-204ENST00000372542 GZF1Q9H116 711 aaPredicted RBP28.32■■■□□ 2.12
SNX21-204ENST00000372542 ISY1Q9ULR0 285 aaKnown RBP28.32■■■□□ 2.12
SNX21-204ENST00000372542 NIP7Q9Y221 180 aaKnown RBP eCLIP28.32■■■□□ 2.12
SNX21-204ENST00000372542 CNTNAP4Q9C0A0 1308 aa28.32■■■□□ 2.12
SNX21-204ENST00000372542 KLHL40Q2TBA0 621 aa28.32■■■□□ 2.12
SNX21-204ENST00000372542 SMC3Q9UQE7 1217 aa28.32■■■□□ 2.12
SNX21-204ENST00000372542 ARAP2Q8WZ64 1704 aa28.3■■■□□ 2.12
SNX21-204ENST00000372542 NTSR2O95665 410 aa28.3■■■□□ 2.12
SNX21-204ENST00000372542 CHGBP05060 677 aa28.3■■■□□ 2.12
SNX21-204ENST00000372542 CCDC152Q4G0S7 254 aa28.3■■■□□ 2.12
SNX21-204ENST00000372542 LINC00116Q8NCU8 138 aa28.29■■■□□ 2.12
SNX21-204ENST00000372542 NEK1Q96PY6 1258 aa28.29■■■□□ 2.12
SNX21-204ENST00000372542 LMBRD1Q9NUN5 540 aa28.29■■■□□ 2.12
SNX21-204ENST00000372542 MAST3O60307 1309 aa28.29■■■□□ 2.12
SNX21-204ENST00000372542 HCLS1P14317 486 aaPredicted RBP28.29■■■□□ 2.12
SNX21-204ENST00000372542 PUM3Q15397 648 aaKnown RBP28.29■■■□□ 2.12
SNX21-204ENST00000372542 DDX49Q9Y6V7 483 aaKnown RBP28.29■■■□□ 2.12
SNX21-204ENST00000372542 NHSQ6T4R5 1651 aa28.29■■■□□ 2.12
SNX21-204ENST00000372542 MYH7P12883 1935 aa28.28■■■□□ 2.12
SNX21-204ENST00000372542 GOLGA6L3A6NEY3 463 aa28.28■■■□□ 2.12
SNX21-204ENST00000372542 LARGE1O95461 756 aa28.28■■■□□ 2.12
SNX21-204ENST00000372542 FSD2A1L4K1 749 aa28.27■■■□□ 2.12
SNX21-204ENST00000372542 CYP21A2P08686 494 aa28.27■■■□□ 2.12
SNX21-204ENST00000372542 HMGB1P09429 215 aaKnown RBP28.27■■■□□ 2.12
SNX21-204ENST00000372542 PDIA4P13667 645 aaKnown RBP28.27■■■□□ 2.12
SNX21-204ENST00000372542 LPIN2Q92539 896 aa28.27■■■□□ 2.12
SNX21-204ENST00000372542 AKAP11Q9UKA4 1901 aa28.27■■■□□ 2.12
SNX21-204ENST00000372542 UQCRFS1P1P0C7P4 283 aa28.27■■■□□ 2.12
SNX21-204ENST00000372542 ZAP70P43403 619 aa28.27■■■□□ 2.12
SNX21-204ENST00000372542 TTF1Q15361 905 aaPredicted RBP28.27■■■□□ 2.12
SNX21-204ENST00000372542 RC3H1Q5TC82 1133 aaKnown RBP28.27■■■□□ 2.12
SNX21-204ENST00000372542 ZSCAN25Q6NSZ9 544 aa28.27■■■□□ 2.12
SNX21-204ENST00000372542 CCDC83Q8IWF9 413 aa28.27■■■□□ 2.12
SNX21-204ENST00000372542 LARP6Q9BRS8 491 aaKnown RBP28.27■■■□□ 2.12
SNX21-204ENST00000372542 TAF6LQ9Y6J9 622 aa28.27■■■□□ 2.12
SNX21-204ENST00000372542 SCARF1Q14162 830 aa28.26■■■□□ 2.11
SNX21-204ENST00000372542 ME3Q16798 604 aa28.26■■■□□ 2.11
SNX21-204ENST00000372542 MPHOSPH8Q99549 860 aa28.26■■■□□ 2.11
SNX21-204ENST00000372542 DDX24Q9GZR7 859 aaKnown RBP eCLIP28.26■■■□□ 2.11
SNX21-204ENST00000372542 TPCN1Q9ULQ1 816 aa28.26■■■□□ 2.11
SNX21-204ENST00000372542 BTAF1O14981 1849 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms