RNA–Protein interactions for RNA: ENST00000371648.4

EDF1-202, Transcript of endothelial differentiation related factor 1, humanhuman

TSL 1 (best) BASIC

Gene EDF1, Length 809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDF1-202ENST00000371648 WDR33Q9C0J8 1336 aaKnown RBP18.35■□□□□ 0.53
EDF1-202ENST00000371648 NEURL1BA8MQ27 555 aa18.35■□□□□ 0.53
EDF1-202ENST00000371648 SLC4A10Q6U841 1118 aa18.35■□□□□ 0.53
EDF1-202ENST00000371648 MRPL50Q8N5N7 158 aaKnown RBP18.35■□□□□ 0.53
EDF1-202ENST00000371648 SSH1Q8WYL5 1049 aa18.35■□□□□ 0.53
EDF1-202ENST00000371648 CT47B1P0C2W7 299 aaPredicted RBP18.34■□□□□ 0.53
EDF1-202ENST00000371648 RPS8P62241 208 aaKnown RBP18.34■□□□□ 0.53
EDF1-202ENST00000371648 CST9Q5W186 159 aa18.34■□□□□ 0.53
EDF1-202ENST00000371648 PAXIP1Q6ZW49 1069 aaPredicted RBP18.34■□□□□ 0.53
EDF1-202ENST00000371648 LINS1Q8NG48 757 aa18.34■□□□□ 0.53
EDF1-202ENST00000371648 DBNDD1Q9H9R9 158 aa18.34■□□□□ 0.53
EDF1-202ENST00000371648 SMC4Q9NTJ3 1288 aa18.34■□□□□ 0.53
EDF1-202ENST00000371648 POLLQ9UGP5 575 aa18.34■□□□□ 0.53
EDF1-202ENST00000371648 CNOT7Q9UIV1 285 aaKnown RBP18.34■□□□□ 0.53
EDF1-202ENST00000371648 DDX60Q8IY21 1712 aaKnown RBP18.34■□□□□ 0.53
EDF1-202ENST00000371648 SHTN1A0MZ66 631 aa18.33■□□□□ 0.52
EDF1-202ENST00000371648 CTCFP49711 727 aaPredicted RBP18.33■□□□□ 0.52
EDF1-202ENST00000371648 HIRAP54198 1017 aaPredicted RBP18.33■□□□□ 0.52
EDF1-202ENST00000371648 GRM1Q13255 1194 aa18.33■□□□□ 0.52
EDF1-202ENST00000371648 ALDH1L2Q3SY69 923 aa18.33■□□□□ 0.52
EDF1-202ENST00000371648 GPR101Q96P66 508 aaPredicted RBP18.33■□□□□ 0.52
EDF1-202ENST00000371648 SEC31BQ9NQW1 1179 aa18.33■□□□□ 0.52
EDF1-202ENST00000371648 WBP1LQ9NX94 342 aa18.33■□□□□ 0.52
EDF1-202ENST00000371648 ZBTB12Q9Y330 459 aaPredicted RBP18.33■□□□□ 0.52
EDF1-202ENST00000371648 DUOX1Q9NRD9 1551 aa18.33■□□□□ 0.52
EDF1-202ENST00000371648 CDHR2Q9BYE9 1310 aa18.32■□□□□ 0.52
EDF1-202ENST00000371648 H7C1D1 291 aa18.32■□□□□ 0.52
EDF1-202ENST00000371648 PDE8AO60658 829 aa18.32■□□□□ 0.52
EDF1-202ENST00000371648 GCKRQ14397 625 aa18.32■□□□□ 0.52
EDF1-202ENST00000371648 DOK7Q18PE1 504 aa18.32■□□□□ 0.52
EDF1-202ENST00000371648 TRPM4Q8TD43 1214 aa18.32■□□□□ 0.52
EDF1-202ENST00000371648 CCDC85AQ96PX6 553 aaPredicted RBP18.32■□□□□ 0.52
EDF1-202ENST00000371648 GLIS2Q9BZE0 524 aaPredicted RBP18.32■□□□□ 0.52
EDF1-202ENST00000371648 COL4A1P02462 1669 aa18.31■□□□□ 0.52
EDF1-202ENST00000371648 PSMD14O00487 310 aa18.31■□□□□ 0.52
EDF1-202ENST00000371648 CYP4F22Q6NT55 531 aa18.31■□□□□ 0.52
EDF1-202ENST00000371648 UBE3BQ7Z3V4 1068 aa18.31■□□□□ 0.52
EDF1-202ENST00000371648 MICALL2Q8IY33 904 aa18.31■□□□□ 0.52
EDF1-202ENST00000371648 TBC1D16Q8TBP0 767 aa18.31■□□□□ 0.52
EDF1-202ENST00000371648 CAPNS2Q96L46 248 aa18.31■□□□□ 0.52
EDF1-202ENST00000371648 EYA3Q99504 573 aa18.31■□□□□ 0.52
EDF1-202ENST00000371648 PGAP2Q9UHJ9 254 aa18.31■□□□□ 0.52
EDF1-202ENST00000371648 H7C1W4 665 aa18.3■□□□□ 0.52
EDF1-202ENST00000371648 ECE2O60344 883 aa18.3■□□□□ 0.52
EDF1-202ENST00000371648 CELF2O95319 508 aaKnown RBP18.3■□□□□ 0.52
EDF1-202ENST00000371648 LBX1P52954 281 aa18.3■□□□□ 0.52
EDF1-202ENST00000371648 PRDM10Q9NQV6 1147 aa18.3■□□□□ 0.52
EDF1-202ENST00000371648 KCNQ5Q9NR82 932 aa18.3■□□□□ 0.52
EDF1-202ENST00000371648 TLL2Q9Y6L7 1015 aa18.3■□□□□ 0.52
EDF1-202ENST00000371648 PTPRCP08575 1304 aa18.29■□□□□ 0.52
EDF1-202ENST00000371648 ECE1P42892 770 aa18.29■□□□□ 0.52
EDF1-202ENST00000371648 MAP2K1Q02750 393 aaPredicted RBP18.29■□□□□ 0.52
EDF1-202ENST00000371648 CCDC152Q4G0S7 254 aa18.29■□□□□ 0.52
EDF1-202ENST00000371648 BEND3Q5T5X7 828 aa18.29■□□□□ 0.52
EDF1-202ENST00000371648 SAMD7Q7Z3H4 446 aa18.29■□□□□ 0.52
EDF1-202ENST00000371648 ZC3H15Q8WU90 426 aaKnown RBP18.29■□□□□ 0.52
EDF1-202ENST00000371648 ZC3H12CQ9C0D7 883 aaKnown RBP18.29■□□□□ 0.52
EDF1-202ENST00000371648 SRCIN1Q9C0H9 1055 aa18.29■□□□□ 0.52
EDF1-202ENST00000371648 ZNF408Q9H9D4 720 aa18.29■□□□□ 0.52
EDF1-202ENST00000371648 C9orf78Q9NZ63 289 aaPredicted RBP18.29■□□□□ 0.52
EDF1-202ENST00000371648 ANKIB1Q9P2G1 1089 aa18.29■□□□□ 0.52
EDF1-202ENST00000371648 LRRC37AA6NMS7 1700 aa18.29■□□□□ 0.52
EDF1-202ENST00000371648 ZBED9Q6R2W3 1325 aa18.28■□□□□ 0.52
EDF1-202ENST00000371648 CDC37L1Q7L3B6 337 aa18.28■□□□□ 0.52
EDF1-202ENST00000371648 DPF2Q92785 391 aa18.28■□□□□ 0.52
EDF1-202ENST00000371648 G3V3G9 751 aa18.27■□□□□ 0.52
EDF1-202ENST00000371648 UFL1O94874 794 aa18.27■□□□□ 0.52
EDF1-202ENST00000371648 TBC1D10BQ4KMP7 808 aaPredicted RBP18.27■□□□□ 0.52
EDF1-202ENST00000371648 RBM26Q5T8P6 1007 aaKnown RBP18.27■□□□□ 0.52
EDF1-202ENST00000371648 DCAF8Q5TAQ9 597 aa18.27■□□□□ 0.52
EDF1-202ENST00000371648 USP48Q86UV5 1035 aa18.27■□□□□ 0.52
EDF1-202ENST00000371648 PODXL2Q9NZ53 605 aa18.27■□□□□ 0.52
EDF1-202ENST00000371648 GGA1Q9UJY5 639 aa18.27■□□□□ 0.52
EDF1-202ENST00000371648 NOB1Q9ULX3 412 aaKnown RBP18.27■□□□□ 0.52
EDF1-202ENST00000371648 ALDH1L1O75891 902 aa18.26■□□□□ 0.51
EDF1-202ENST00000371648 HSPA8P11142 646 aaKnown RBP18.26■□□□□ 0.51
EDF1-202ENST00000371648 RARSP54136 660 aaKnown RBP18.26■□□□□ 0.51
EDF1-202ENST00000371648 SAPCD2Q86UD0 394 aa18.26■□□□□ 0.51
EDF1-202ENST00000371648 RTL9Q8NET4 1388 aa18.26■□□□□ 0.51
EDF1-202ENST00000371648 AOC2O75106 756 aa18.25■□□□□ 0.51
EDF1-202ENST00000371648 EGFRP00533 1210 aa18.25■□□□□ 0.51
EDF1-202ENST00000371648 CTSWP56202 376 aa18.25■□□□□ 0.51
EDF1-202ENST00000371648 DLK2Q6UY11 383 aa18.25■□□□□ 0.51
EDF1-202ENST00000371648 ANKRD18AQ8IVF6 992 aa18.25■□□□□ 0.51
EDF1-202ENST00000371648 GRM8O00222 908 aa18.24■□□□□ 0.51
EDF1-202ENST00000371648 RPS12P25398 132 aaKnown RBP18.24■□□□□ 0.51
EDF1-202ENST00000371648 TTLL11Q8NHH1 800 aa18.24■□□□□ 0.51
EDF1-202ENST00000371648 BEGAINQ9BUH8 593 aa18.24■□□□□ 0.51
EDF1-202ENST00000371648 TRPM7Q96QT4 1865 aa18.23■□□□□ 0.51
EDF1-202ENST00000371648 API5Q9BZZ5 524 aaKnown RBP18.23■□□□□ 0.51
EDF1-202ENST00000371648 MYH3P11055 1940 aa18.22■□□□□ 0.51
EDF1-202ENST00000371648 IPO8O15397 1037 aaKnown RBP18.22■□□□□ 0.51
EDF1-202ENST00000371648 VIL1P09327 827 aaKnown RBP18.22■□□□□ 0.51
EDF1-202ENST00000371648 KRT26Q7Z3Y9 468 aa18.22■□□□□ 0.51
EDF1-202ENST00000371648 FRAT1Q92837 279 aaPredicted RBP18.22■□□□□ 0.51
EDF1-202ENST00000371648 CDC5LQ99459 802 aaKnown RBP18.22■□□□□ 0.51
EDF1-202ENST00000371648 GREM2Q9H772 168 aa18.22■□□□□ 0.51
EDF1-202ENST00000371648 CHMP3Q9Y3E7 222 aa18.22■□□□□ 0.51
EDF1-202ENST00000371648 XDHP47989 1333 aa18.22■□□□□ 0.51
EDF1-202ENST00000371648 ATP2B4P23634 1241 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms