RNA–Protein interactions for RNA: ENST00000370397.7

CHUK-201, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHUK, Length 3,625 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-201ENST00000370397 LTV1Q96GA3 475 aaPredicted RBP20.64■□□□□ 0.9
CHUK-201ENST00000370397 NEMFO60524 1076 aa20.64■□□□□ 0.89
CHUK-201ENST00000370397 RNF20Q5VTR2 975 aa20.64■□□□□ 0.89
CHUK-201ENST00000370397 ZSCAN16Q9H4T2 348 aaPredicted RBP20.64■□□□□ 0.89
CHUK-201ENST00000370397 IP6K1Q92551 441 aa20.64■□□□□ 0.89
CHUK-201ENST00000370397 AGXT2Q9BYV1 514 aa20.64■□□□□ 0.89
CHUK-201ENST00000370397 SCN11AQ9UI33 1791 aa20.63■□□□□ 0.89
CHUK-201ENST00000370397 CCDC93Q567U6 631 aa20.63■□□□□ 0.89
CHUK-201ENST00000370397 ZNF397Q8NF99 534 aaPredicted RBP20.63■□□□□ 0.89
CHUK-201ENST00000370397 L2HGDHQ9H9P8 463 aa20.63■□□□□ 0.89
CHUK-201ENST00000370397 BTBD11A6QL63 1104 aa20.63■□□□□ 0.89
CHUK-201ENST00000370397 CYP21A2P08686 494 aa20.63■□□□□ 0.89
CHUK-201ENST00000370397 NSUN7Q8NE18 718 aaKnown RBP20.63■□□□□ 0.89
CHUK-201ENST00000370397 BICD2Q8TD16 824 aa20.63■□□□□ 0.89
CHUK-201ENST00000370397 ARFGEF2Q9Y6D5 1785 aa20.63■□□□□ 0.89
CHUK-201ENST00000370397 LINS1Q8NG48 757 aa20.63■□□□□ 0.89
CHUK-201ENST00000370397 OSBPL5Q9H0X9 879 aaPredicted RBP20.63■□□□□ 0.89
CHUK-201ENST00000370397 C9orf78Q9NZ63 289 aaPredicted RBP20.63■□□□□ 0.89
CHUK-201ENST00000370397 TBX22Q9Y458 520 aa20.63■□□□□ 0.89
CHUK-201ENST00000370397 SKILP12757 684 aa20.62■□□□□ 0.89
CHUK-201ENST00000370397 STX1AQ16623 288 aa20.62■□□□□ 0.89
CHUK-201ENST00000370397 AKAP4Q5JQC9 854 aa20.62■□□□□ 0.89
CHUK-201ENST00000370397 KLHDC4Q8TBB5 520 aa20.62■□□□□ 0.89
CHUK-201ENST00000370397 Q6ZUG5 572 aa20.62■□□□□ 0.89
CHUK-201ENST00000370397 FSD1Q9BTV5 496 aa20.62■□□□□ 0.89
CHUK-201ENST00000370397 CCDC69A6NI79 296 aa20.61■□□□□ 0.89
CHUK-201ENST00000370397 EPHA10Q5JZY3 1008 aa20.61■□□□□ 0.89
CHUK-201ENST00000370397 E4F1Q66K89 784 aaPredicted RBP20.61■□□□□ 0.89
CHUK-201ENST00000370397 GLI3P10071 1580 aa20.61■□□□□ 0.89
CHUK-201ENST00000370397 GOLGA6L4A6NEF3 574 aa20.61■□□□□ 0.89
CHUK-201ENST00000370397 PFKFB2O60825 505 aa20.61■□□□□ 0.89
CHUK-201ENST00000370397 H2AFXP16104 143 aaPredicted RBP20.61■□□□□ 0.89
CHUK-201ENST00000370397 KCNJ4P48050 445 aa20.61■□□□□ 0.89
CHUK-201ENST00000370397 RFX5P48382 616 aaPredicted RBP20.61■□□□□ 0.89
CHUK-201ENST00000370397 NAA16Q6N069 864 aaPredicted RBP20.61■□□□□ 0.89
CHUK-201ENST00000370397 LRRN4CLQ8ND94 238 aa20.61■□□□□ 0.89
CHUK-201ENST00000370397 NEK1Q96PY6 1258 aa20.61■□□□□ 0.89
CHUK-201ENST00000370397 DBNLQ9UJU6 430 aaKnown RBP20.6■□□□□ 0.89
CHUK-201ENST00000370397 ERO1AQ96HE7 468 aa20.6■□□□□ 0.89
CHUK-201ENST00000370397 USP28Q96RU2 1077 aa20.6■□□□□ 0.89
CHUK-201ENST00000370397 CFAP45Q9UL16 551 aa20.6■□□□□ 0.89
CHUK-201ENST00000370397 LLPHQ9BRT6 129 aaKnown RBP20.59■□□□□ 0.89
CHUK-201ENST00000370397 CTAGE5O15320 804 aa20.59■□□□□ 0.89
CHUK-201ENST00000370397 RNMTO43148 476 aaKnown RBP20.59■□□□□ 0.89
CHUK-201ENST00000370397 ATP5JP18859 108 aa20.59■□□□□ 0.89
CHUK-201ENST00000370397 ELF2Q15723 593 aa20.59■□□□□ 0.89
CHUK-201ENST00000370397 CCAR1Q8IX12 1150 aaKnown RBP20.59■□□□□ 0.89
CHUK-201ENST00000370397 C4AP0C0L4 1744 aa20.59■□□□□ 0.89
CHUK-201ENST00000370397 C4BP0C0L5 1744 aa20.59■□□□□ 0.89
CHUK-201ENST00000370397 PTPN14Q15678 1187 aa20.59■□□□□ 0.89
CHUK-201ENST00000370397 MPRIPQ6WCQ1 1025 aa20.59■□□□□ 0.89
CHUK-201ENST00000370397 FMR1NBQ8N0W7 255 aaPredicted RBP20.59■□□□□ 0.89
CHUK-201ENST00000370397 RGPD5Q99666 1765 aa20.59■□□□□ 0.89
CHUK-201ENST00000370397 KRT32Q14532 448 aa20.58■□□□□ 0.89
CHUK-201ENST00000370397 SEC62Q99442 399 aaKnown RBP20.58■□□□□ 0.89
CHUK-201ENST00000370397 PODXL2Q9NZ53 605 aa20.58■□□□□ 0.89
CHUK-201ENST00000370397 NOL12Q9UGY1 213 aaKnown RBP eCLIP20.58■□□□□ 0.89
CHUK-201ENST00000370397 V9GYY5 206 aaPredicted RBP20.58■□□□□ 0.89
CHUK-201ENST00000370397 ECM29Q5VYK3 1845 aa20.58■□□□□ 0.88
CHUK-201ENST00000370397 FANCGO15287 622 aa20.58■□□□□ 0.88
CHUK-201ENST00000370397 ABTB2Q8N961 1025 aa20.58■□□□□ 0.88
CHUK-201ENST00000370397 EXOSC10Q01780 885 aaKnown RBP20.58■□□□□ 0.88
CHUK-201ENST00000370397 CCDC129Q6ZRS4 1044 aa20.58■□□□□ 0.88
CHUK-201ENST00000370397 CHMP4AQ9BY43 222 aa20.58■□□□□ 0.88
CHUK-201ENST00000370397 ST7Q9NRC1 585 aa20.58■□□□□ 0.88
CHUK-201ENST00000370397 LRP10Q7Z4F1 713 aa20.57■□□□□ 0.88
CHUK-201ENST00000370397 KRT222Q8N1A0 295 aa20.57■□□□□ 0.88
CHUK-201ENST00000370397 FAM160A1Q05DH4 1040 aa20.57■□□□□ 0.88
CHUK-201ENST00000370397 ARMCX5Q6P1M9 558 aa20.57■□□□□ 0.88
CHUK-201ENST00000370397 NDUFB9Q9Y6M9 179 aa20.57■□□□□ 0.88
CHUK-201ENST00000370397 G3BP1Q13283 466 aaKnown RBP eCLIP20.56■□□□□ 0.88
CHUK-201ENST00000370397 HSD3B7Q9H2F3 369 aa20.56■□□□□ 0.88
CHUK-201ENST00000370397 SLIT3O75094 1523 aa20.56■□□□□ 0.88
CHUK-201ENST00000370397 SIL1Q9H173 461 aa20.56■□□□□ 0.88
CHUK-201ENST00000370397 ZNF592Q92610 1267 aa20.55■□□□□ 0.88
CHUK-201ENST00000370397 FHOD1Q9Y613 1164 aa20.55■□□□□ 0.88
CHUK-201ENST00000370397 TJP1Q07157 1748 aa20.55■□□□□ 0.88
CHUK-201ENST00000370397 KCNJ6P48051 423 aa20.55■□□□□ 0.88
CHUK-201ENST00000370397 ERCC4Q92889 916 aaPredicted RBP20.55■□□□□ 0.88
CHUK-201ENST00000370397 BPIFA3Q9BQP9 254 aa20.55■□□□□ 0.88
CHUK-201ENST00000370397 A0A0G2JLW4 131 aa20.55■□□□□ 0.88
CHUK-201ENST00000370397 COPRSQ9NQ92 184 aa20.55■□□□□ 0.88
CHUK-201ENST00000370397 TAF3Q5VWG9 929 aa20.54■□□□□ 0.88
CHUK-201ENST00000370397 LRRC2Q9BYS8 371 aa20.54■□□□□ 0.88
CHUK-201ENST00000370397 TRMT1Q9NXH9 659 aaKnown RBP20.54■□□□□ 0.88
CHUK-201ENST00000370397 NEURL1BA8MQ27 555 aa20.54■□□□□ 0.88
CHUK-201ENST00000370397 CEBPZQ03701 1054 aaKnown RBP20.54■□□□□ 0.88
CHUK-201ENST00000370397 NCAPHQ15003 741 aa20.54■□□□□ 0.88
CHUK-201ENST00000370397 LRRC59Q96AG4 307 aaKnown RBP20.54■□□□□ 0.88
CHUK-201ENST00000370397 PPP1R13BQ96KQ4 1090 aa20.54■□□□□ 0.88
CHUK-201ENST00000370397 SH3TC1Q8TE82 1336 aa20.54■□□□□ 0.88
CHUK-201ENST00000370397 GOLGA6L19H0YKK7 550 aa20.54■□□□□ 0.88
CHUK-201ENST00000370397 FDPSP14324 419 aaKnown RBP20.54■□□□□ 0.88
CHUK-201ENST00000370397 PTPN12Q05209 780 aaKnown RBP20.54■□□□□ 0.88
CHUK-201ENST00000370397 DDX21Q9NR30 783 aaKnown RBP eCLIP20.54■□□□□ 0.88
CHUK-201ENST00000370397 SLU7O95391 586 aaKnown RBP20.53■□□□□ 0.88
CHUK-201ENST00000370397 ATL3Q6DD88 541 aa20.53■□□□□ 0.88
CHUK-201ENST00000370397 AOPEPQ8N6M6 819 aa20.53■□□□□ 0.88
CHUK-201ENST00000370397 IMPACTQ9P2X3 320 aa20.53■□□□□ 0.88
CHUK-201ENST00000370397 SPEF2Q9C093 1822 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms