RNA–Protein interactions for RNA: ENST00000369462.5

BRCC3-204, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,846 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-204ENST00000369462 METTL24Q5JXM2 366 aa13.49□□□□□ -0.25
BRCC3-204ENST00000369462 COL4A1P02462 1669 aa13.49□□□□□ -0.25
BRCC3-204ENST00000369462 GRAPQ13588 217 aa13.49□□□□□ -0.25
BRCC3-204ENST00000369462 C2CD5Q86YS7 1000 aa13.49□□□□□ -0.25
BRCC3-204ENST00000369462 HELBQ8NG08 1087 aaPredicted RBP13.49□□□□□ -0.25
BRCC3-204ENST00000369462 GRAPLQ8TC17 118 aaPredicted RBP13.49□□□□□ -0.25
BRCC3-204ENST00000369462 OTUD7AQ8TE49 926 aaPredicted RBP13.49□□□□□ -0.25
BRCC3-204ENST00000369462 BSDC1Q9NW68 430 aaPredicted RBP13.49□□□□□ -0.25
BRCC3-204ENST00000369462 ANKRD31Q8N7Z5 1873 aa13.49□□□□□ -0.25
BRCC3-204ENST00000369462 H0YIN7 160 aa13.48□□□□□ -0.25
BRCC3-204ENST00000369462 NPR1P16066 1061 aa13.48□□□□□ -0.25
BRCC3-204ENST00000369462 SGIP1Q9BQI5 828 aa13.48□□□□□ -0.25
BRCC3-204ENST00000369462 CHRNA5P30532 468 aa13.48□□□□□ -0.25
BRCC3-204ENST00000369462 EAF2Q96CJ1 260 aaPredicted RBP13.48□□□□□ -0.25
BRCC3-204ENST00000369462 PTGER2P43116 358 aa13.47□□□□□ -0.25
BRCC3-204ENST00000369462 AACSQ86V21 672 aa13.47□□□□□ -0.25
BRCC3-204ENST00000369462 ZNF622Q969S3 477 aaKnown RBP eCLIP13.47□□□□□ -0.25
BRCC3-204ENST00000369462 MASTLQ96GX5 879 aa13.47□□□□□ -0.25
BRCC3-204ENST00000369462 CRAMP1Q96RY5 1269 aa13.47□□□□□ -0.25
BRCC3-204ENST00000369462 PPP1R1BQ9UD71 204 aaPredicted RBP13.47□□□□□ -0.25
BRCC3-204ENST00000369462 MROH5Q6ZUA9 1318 aa13.47□□□□□ -0.25
BRCC3-204ENST00000369462 C10orf71Q711Q0 1435 aa13.46□□□□□ -0.25
BRCC3-204ENST00000369462 TAF5LO75529 589 aa13.46□□□□□ -0.25
BRCC3-204ENST00000369462 IFIT2P09913 472 aaKnown RBP13.46□□□□□ -0.25
BRCC3-204ENST00000369462 TIMM10P62072 90 aa13.46□□□□□ -0.25
BRCC3-204ENST00000369462 CHRNDQ07001 517 aa13.46□□□□□ -0.25
BRCC3-204ENST00000369462 TNNI3KQ59H18 835 aa13.46□□□□□ -0.25
BRCC3-204ENST00000369462 CCDC8Q9H0W5 538 aaPredicted RBP13.46□□□□□ -0.25
BRCC3-204ENST00000369462 MINPP1Q9UNW1 487 aa13.46□□□□□ -0.25
BRCC3-204ENST00000369462 FPGT-TNNI3KV9GXZ4 949 aa13.46□□□□□ -0.25
BRCC3-204ENST00000369462 BBOX1O75936 387 aa13.46□□□□□ -0.25
BRCC3-204ENST00000369462 PDE8BO95263 885 aa13.46□□□□□ -0.25
BRCC3-204ENST00000369462 SPON1Q9HCB6 807 aa13.46□□□□□ -0.25
BRCC3-204ENST00000369462 ALDH1B1P30837 517 aa13.45□□□□□ -0.26
BRCC3-204ENST00000369462 PLEKHM2Q8IWE5 1019 aa13.45□□□□□ -0.26
BRCC3-204ENST00000369462 VGLL2Q8N8G2 317 aa13.45□□□□□ -0.26
BRCC3-204ENST00000369462 NEUROD6Q96NK8 337 aa13.45□□□□□ -0.26
BRCC3-204ENST00000369462 SNAP23O00161 211 aa13.45□□□□□ -0.26
BRCC3-204ENST00000369462 SLC51AQ86UW1 340 aa13.45□□□□□ -0.26
BRCC3-204ENST00000369462 KLHL34Q8N239 644 aa13.45□□□□□ -0.26
BRCC3-204ENST00000369462 AKAP2Q9Y2D5 859 aa13.45□□□□□ -0.26
BRCC3-204ENST00000369462 LRP5O75197 1615 aa13.45□□□□□ -0.26
BRCC3-204ENST00000369462 TSHZ3Q63HK5 1081 aa13.45□□□□□ -0.26
BRCC3-204ENST00000369462 GPR108Q9NPR9 543 aa13.45□□□□□ -0.26
BRCC3-204ENST00000369462 TLR7Q9NYK1 1049 aaKnown RBP13.45□□□□□ -0.26
BRCC3-204ENST00000369462 A0A0G2JLW4 131 aa13.44□□□□□ -0.26
BRCC3-204ENST00000369462 A0A1B0GUL7 405 aa13.44□□□□□ -0.26
BRCC3-204ENST00000369462 MX1P20591 662 aa13.44□□□□□ -0.26
BRCC3-204ENST00000369462 SPEF2Q9C093 1822 aa13.44□□□□□ -0.26
BRCC3-204ENST00000369462 SOCS7O14512 581 aa13.44□□□□□ -0.26
BRCC3-204ENST00000369462 PDE1AP54750 535 aa13.44□□□□□ -0.26
BRCC3-204ENST00000369462 ATP2B3Q16720 1220 aa13.44□□□□□ -0.26
BRCC3-204ENST00000369462 STYK1Q6J9G0 422 aa13.44□□□□□ -0.26
BRCC3-204ENST00000369462 SALL3Q9BXA9 1300 aa13.43□□□□□ -0.26
BRCC3-204ENST00000369462 PUM3Q15397 648 aaKnown RBP13.43□□□□□ -0.26
BRCC3-204ENST00000369462 DBNDD2Q9BQY9 259 aa13.43□□□□□ -0.26
BRCC3-204ENST00000369462 DBNLQ9UJU6 430 aaKnown RBP13.43□□□□□ -0.26
BRCC3-204ENST00000369462 WTIPA6NIX2 430 aaPredicted RBP13.43□□□□□ -0.26
BRCC3-204ENST00000369462 PPEF1O14829 653 aaPredicted RBP13.43□□□□□ -0.26
BRCC3-204ENST00000369462 COL11A2P13942 1736 aaPredicted RBP13.43□□□□□ -0.26
BRCC3-204ENST00000369462 DPEP1P16444 411 aa13.43□□□□□ -0.26
BRCC3-204ENST00000369462 CNKSR1Q969H4 720 aa13.43□□□□□ -0.26
BRCC3-204ENST00000369462 ANKIB1Q9P2G1 1089 aa13.43□□□□□ -0.26
BRCC3-204ENST00000369462 TGFB2P61812 414 aa13.42□□□□□ -0.26
BRCC3-204ENST00000369462 PRPF40BQ6NWY9 871 aaKnown RBP13.42□□□□□ -0.26
BRCC3-204ENST00000369462 LPIN2Q92539 896 aa13.42□□□□□ -0.26
BRCC3-204ENST00000369462 ANKRD2Q9GZV1 360 aa13.42□□□□□ -0.26
BRCC3-204ENST00000369462 ZNF609O15014 1411 aa13.41□□□□□ -0.26
BRCC3-204ENST00000369462 FGFR2P21802 821 aa13.41□□□□□ -0.26
BRCC3-204ENST00000369462 ADORA1P30542 326 aa13.41□□□□□ -0.26
BRCC3-204ENST00000369462 TMC4Q7Z404 712 aa13.41□□□□□ -0.26
BRCC3-204ENST00000369462 XAGE2Q96GT9 111 aa13.41□□□□□ -0.26
BRCC3-204ENST00000369462 STAP2Q9UGK3 403 aa13.41□□□□□ -0.26
BRCC3-204ENST00000369462 NSFL1CQ9UNZ2 370 aaKnown RBP13.41□□□□□ -0.26
BRCC3-204ENST00000369462 ATP6V0A2Q9Y487 856 aa13.41□□□□□ -0.26
BRCC3-204ENST00000369462 KCNA3P22001 575 aa13.41□□□□□ -0.26
BRCC3-204ENST00000369462 GORABQ5T7V8 394 aa13.41□□□□□ -0.26
BRCC3-204ENST00000369462 OLFM4Q6UX06 510 aa13.41□□□□□ -0.26
BRCC3-204ENST00000369462 SP8Q8IXZ3 490 aa13.41□□□□□ -0.26
BRCC3-204ENST00000369462 GPATCH3Q96I76 525 aa13.41□□□□□ -0.26
BRCC3-204ENST00000369462 OSBPL3Q9H4L5 887 aa13.41□□□□□ -0.26
BRCC3-204ENST00000369462 ECHDC1Q9NTX5 307 aa13.41□□□□□ -0.26
BRCC3-204ENST00000369462 ZNF219Q9P2Y4 722 aaPredicted RBP13.41□□□□□ -0.26
BRCC3-204ENST00000369462 CD2APQ9Y5K6 639 aa13.41□□□□□ -0.26
BRCC3-204ENST00000369462 KCNJ4P48050 445 aa13.4□□□□□ -0.26
BRCC3-204ENST00000369462 IFIT1P09914 478 aaKnown RBP13.4□□□□□ -0.26
BRCC3-204ENST00000369462 SLC5A1P13866 664 aa13.4□□□□□ -0.26
BRCC3-204ENST00000369462 UBE4AQ14139 1066 aa13.4□□□□□ -0.26
BRCC3-204ENST00000369462 TTLL6Q8N841 843 aa13.4□□□□□ -0.26
BRCC3-204ENST00000369462 TMX4Q9H1E5 349 aaPredicted RBP13.4□□□□□ -0.26
BRCC3-204ENST00000369462 WWC3Q9ULE0 1092 aa13.4□□□□□ -0.26
BRCC3-204ENST00000369462 XDHP47989 1333 aa13.4□□□□□ -0.26
BRCC3-204ENST00000369462 GPSM2P81274 684 aa13.4□□□□□ -0.27
BRCC3-204ENST00000369462 TTC41PQ6P2S7 1318 aa13.39□□□□□ -0.27
BRCC3-204ENST00000369462 PI4K2BQ8TCG2 481 aa13.39□□□□□ -0.27
BRCC3-204ENST00000369462 ZNF804BA4D1E1 1349 aa13.39□□□□□ -0.27
BRCC3-204ENST00000369462 ERC2O15083 957 aa13.38□□□□□ -0.27
BRCC3-204ENST00000369462 CCDC158Q5M9N0 1113 aa13.38□□□□□ -0.27
BRCC3-204ENST00000369462 TTC22Q5TAA0 569 aa13.38□□□□□ -0.27
BRCC3-204ENST00000369462 PIM2Q9P1W9 311 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms