RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 DPP8Q6V1X1 898 aaPredicted RBP23.38■■□□□ 1.33
LMNA-204ENST00000368298 MPHOSPH8Q99549 860 aa23.38■■□□□ 1.33
LMNA-204ENST00000368298 MINPP1Q9UNW1 487 aa23.38■■□□□ 1.33
LMNA-204ENST00000368298 SUPT20HQ8NEM7 779 aa23.37■■□□□ 1.33
LMNA-204ENST00000368298 DUOX1Q9NRD9 1551 aa23.37■■□□□ 1.33
LMNA-204ENST00000368298 GPSM2P81274 684 aa23.36■■□□□ 1.33
LMNA-204ENST00000368298 RNF181Q9P0P0 153 aa23.36■■□□□ 1.33
LMNA-204ENST00000368298 DDX19BQ9UMR2 479 aa23.36■■□□□ 1.33
LMNA-204ENST00000368298 NSFL1CQ9UNZ2 370 aaKnown RBP23.36■■□□□ 1.33
LMNA-204ENST00000368298 ZC3H4Q9UPT8 1303 aaKnown RBP23.36■■□□□ 1.33
LMNA-204ENST00000368298 RFX5P48382 616 aaPredicted RBP23.36■■□□□ 1.33
LMNA-204ENST00000368298 RRP1P56182 461 aaKnown RBP23.36■■□□□ 1.33
LMNA-204ENST00000368298 C20orf194Q5TEA3 1177 aa23.36■■□□□ 1.33
LMNA-204ENST00000368298 XDHP47989 1333 aa23.35■■□□□ 1.33
LMNA-204ENST00000368298 LDHAL6AQ6ZMR3 332 aa23.35■■□□□ 1.33
LMNA-204ENST00000368298 ZNF594Q96JF6 807 aaPredicted RBP23.35■■□□□ 1.33
LMNA-204ENST00000368298 ZNF277Q9NRM2 450 aaPredicted RBP23.35■■□□□ 1.33
LMNA-204ENST00000368298 COG6Q9Y2V7 657 aa23.35■■□□□ 1.33
LMNA-204ENST00000368298 IARSP41252 1262 aaKnown RBP23.34■■□□□ 1.33
LMNA-204ENST00000368298 POLLQ9UGP5 575 aa23.34■■□□□ 1.33
LMNA-204ENST00000368298 TAF7LQ5H9L4 462 aa23.33■■□□□ 1.33
LMNA-204ENST00000368298 TBC1D16Q8TBP0 767 aa23.33■■□□□ 1.33
LMNA-204ENST00000368298 ANKRD2Q9GZV1 360 aa23.33■■□□□ 1.33
LMNA-204ENST00000368298 CHMP4BQ9H444 224 aaKnown RBP23.33■■□□□ 1.33
LMNA-204ENST00000368298 ANKIB1Q9P2G1 1089 aa23.33■■□□□ 1.33
LMNA-204ENST00000368298 PTPN12Q05209 780 aaKnown RBP23.32■■□□□ 1.32
LMNA-204ENST00000368298 FBXO3Q9UK99 471 aa23.32■■□□□ 1.32
LMNA-204ENST00000368298 RIPOR2Q9Y4F9 1068 aa23.32■■□□□ 1.32
LMNA-204ENST00000368298 ATP2B4P23634 1241 aa23.31■■□□□ 1.32
LMNA-204ENST00000368298 CHRNDQ07001 517 aa23.31■■□□□ 1.32
LMNA-204ENST00000368298 KIAA2012Q0VF49 1180 aa23.31■■□□□ 1.32
LMNA-204ENST00000368298 ZBTB40Q9NUA8 1239 aa23.31■■□□□ 1.32
LMNA-204ENST00000368298 GGA1Q9UJY5 639 aa23.31■■□□□ 1.32
LMNA-204ENST00000368298 LEMD3Q9Y2U8 911 aa23.3■■□□□ 1.32
LMNA-204ENST00000368298 A0A1B0GUL6 1792 aa23.3■■□□□ 1.32
LMNA-204ENST00000368298 TIAM2Q8IVF5 1701 aa23.3■■□□□ 1.32
LMNA-204ENST00000368298 EYA3Q99504 573 aa23.3■■□□□ 1.32
LMNA-204ENST00000368298 PUS3Q9BZE2 481 aaKnown RBP23.3■■□□□ 1.32
LMNA-204ENST00000368298 COPRSQ9NQ92 184 aa23.3■■□□□ 1.32
LMNA-204ENST00000368298 CNNM1Q9NRU3 951 aa23.3■■□□□ 1.32
LMNA-204ENST00000368298 C6orf229H3BNL8 230 aa23.29■■□□□ 1.32
LMNA-204ENST00000368298 SRGAP3O43295 1099 aa23.29■■□□□ 1.32
LMNA-204ENST00000368298 UFL1O94874 794 aa23.29■■□□□ 1.32
LMNA-204ENST00000368298 ATP8B2P98198 1209 aa23.29■■□□□ 1.32
LMNA-204ENST00000368298 WASHC4Q2M389 1173 aa23.29■■□□□ 1.32
LMNA-204ENST00000368298 KLHDC4Q8TBB5 520 aa23.29■■□□□ 1.32
LMNA-204ENST00000368298 COL4A5P29400 1685 aa23.29■■□□□ 1.32
LMNA-204ENST00000368298 MROH5Q6ZUA9 1318 aa23.28■■□□□ 1.32
LMNA-204ENST00000368298 FZD9O00144 591 aa23.28■■□□□ 1.32
LMNA-204ENST00000368298 PPIP5K2O43314 1243 aa23.28■■□□□ 1.32
LMNA-204ENST00000368298 CIAO1O76071 339 aa23.28■■□□□ 1.32
LMNA-204ENST00000368298 AOC3Q16853 763 aa23.28■■□□□ 1.32
LMNA-204ENST00000368298 LARGE2Q8N3Y3 721 aa23.28■■□□□ 1.32
LMNA-204ENST00000368298 EYA2O00167 538 aa23.27■■□□□ 1.32
LMNA-204ENST00000368298 POLA2Q14181 598 aa23.27■■□□□ 1.32
LMNA-204ENST00000368298 LRRC24Q50LG9 513 aa23.27■■□□□ 1.32
LMNA-204ENST00000368298 JDP2Q8WYK2 163 aa23.27■■□□□ 1.32
LMNA-204ENST00000368298 PNMA6EA0A0J9YXQ4 647 aa23.26■■□□□ 1.31
LMNA-204ENST00000368298 SSH3Q8TE77 659 aa23.26■■□□□ 1.31
LMNA-204ENST00000368298 C1orf115Q9H7X2 142 aa23.26■■□□□ 1.31
LMNA-204ENST00000368298 WTIPA6NIX2 430 aaPredicted RBP23.25■■□□□ 1.31
LMNA-204ENST00000368298 ATG9AQ7Z3C6 839 aa23.25■■□□□ 1.31
LMNA-204ENST00000368298 ZC3H12CQ9C0D7 883 aaKnown RBP23.25■■□□□ 1.31
LMNA-204ENST00000368298 ZNF804BA4D1E1 1349 aa23.25■■□□□ 1.31
LMNA-204ENST00000368298 MED23Q9ULK4 1368 aa23.24■■□□□ 1.31
LMNA-204ENST00000368298 CEP85Q6P2H3 762 aa23.24■■□□□ 1.31
LMNA-204ENST00000368298 C15orf52Q6ZUT6 534 aaKnown RBP23.24■■□□□ 1.31
LMNA-204ENST00000368298 VGLL2Q8N8G2 317 aa23.24■■□□□ 1.31
LMNA-204ENST00000368298 HELBQ8NG08 1087 aaPredicted RBP23.24■■□□□ 1.31
LMNA-204ENST00000368298 TAF5LO75529 589 aa23.24■■□□□ 1.31
LMNA-204ENST00000368298 NIM1KQ8IY84 436 aa23.24■■□□□ 1.31
LMNA-204ENST00000368298 IRS2Q9Y4H2 1338 aa23.23■■□□□ 1.31
LMNA-204ENST00000368298 GLTPD2A6NH11 291 aa23.23■■□□□ 1.31
LMNA-204ENST00000368298 UBE4AQ14139 1066 aa23.23■■□□□ 1.31
LMNA-204ENST00000368298 RPAP2Q8IXW5 612 aaPredicted RBP23.23■■□□□ 1.31
LMNA-204ENST00000368298 ZNRF3Q9ULT6 936 aa23.23■■□□□ 1.31
LMNA-204ENST00000368298 PA2G4Q9UQ80 394 aaKnown RBP23.23■■□□□ 1.31
LMNA-204ENST00000368298 RIMBP2O15034 1052 aa23.22■■□□□ 1.31
LMNA-204ENST00000368298 PDE8BO95263 885 aa23.22■■□□□ 1.31
LMNA-204ENST00000368298 DPY19L2Q6NUT2 758 aa23.22■■□□□ 1.31
LMNA-204ENST00000368298 GPR101Q96P66 508 aaPredicted RBP23.22■■□□□ 1.31
LMNA-204ENST00000368298 IL15P40933 162 aaPredicted RBP23.21■■□□□ 1.31
LMNA-204ENST00000368298 METTL24Q5JXM2 366 aa23.21■■□□□ 1.31
LMNA-204ENST00000368298 TXNRD3Q86VQ6 643 aa23.2■■□□□ 1.3
LMNA-204ENST00000368298 SIL1Q9H173 461 aa23.2■■□□□ 1.3
LMNA-204ENST00000368298 SNAP23O00161 211 aa23.19■■□□□ 1.3
LMNA-204ENST00000368298 KCNJ4P48050 445 aa23.19■■□□□ 1.3
LMNA-204ENST00000368298 NOP58Q9Y2X3 529 aaKnown RBP23.19■■□□□ 1.3
LMNA-204ENST00000368298 YDJCA8MPS7 323 aa23.18■■□□□ 1.3
LMNA-204ENST00000368298 EIF6P56537 245 aaKnown RBP23.18■■□□□ 1.3
LMNA-204ENST00000368298 KDM2BQ8NHM5 1336 aa23.18■■□□□ 1.3
LMNA-204ENST00000368298 ZNF541Q9H0D2 1346 aa23.18■■□□□ 1.3
LMNA-204ENST00000368298 ECE2O60344 883 aa23.17■■□□□ 1.3
LMNA-204ENST00000368298 FGFR2P21802 821 aa23.17■■□□□ 1.3
LMNA-204ENST00000368298 KLRK1P26718 216 aa23.17■■□□□ 1.3
LMNA-204ENST00000368298 IRX6P78412 446 aaPredicted RBP23.17■■□□□ 1.3
LMNA-204ENST00000368298 PODNQ7Z5L7 613 aa23.17■■□□□ 1.3
LMNA-204ENST00000368298 SIRT2Q8IXJ6 389 aa23.17■■□□□ 1.3
LMNA-204ENST00000368298 GPC2Q8N158 579 aa23.17■■□□□ 1.3
LMNA-204ENST00000368298 COA1Q9GZY4 146 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms